RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 COL9A3Q14050 684 aaPredicted RBP18■□□□□ 0.47
C9orf3-217ENST00000479161 CDC37Q16543 378 aaPredicted RBP18■□□□□ 0.47
C9orf3-217ENST00000479161 CCDC174Q6PII3 467 aa18■□□□□ 0.47
C9orf3-217ENST00000479161 BLOC1S2Q6QNY1 142 aa18■□□□□ 0.47
C9orf3-217ENST00000479161 CHMP4CQ96CF2 233 aa18■□□□□ 0.47
C9orf3-217ENST00000479161 TINF2Q9BSI4 451 aa18■□□□□ 0.47
C9orf3-217ENST00000479161 XRN2Q9H0D6 950 aaKnown RBP eCLIP18■□□□□ 0.471e-7■■■■■ 39.6
C9orf3-217ENST00000479161 MAP3K20Q9NYL2 800 aaKnown RBP18■□□□□ 0.47
C9orf3-217ENST00000479161 SLC12A7Q9Y666 1083 aa18■□□□□ 0.47
C9orf3-217ENST00000479161 ABCB11O95342 1321 aa17.99■□□□□ 0.47
C9orf3-217ENST00000479161 POTEFA5A3E0 1075 aa17.99■□□□□ 0.47
C9orf3-217ENST00000479161 ZBTB5O15062 677 aa17.99■□□□□ 0.47
C9orf3-217ENST00000479161 EVCP57679 992 aa17.99■□□□□ 0.47
C9orf3-217ENST00000479161 GHRHRQ02643 423 aa17.99■□□□□ 0.47
C9orf3-217ENST00000479161 SYNE3Q6ZMZ3 975 aa17.99■□□□□ 0.47
C9orf3-217ENST00000479161 NFXL1Q6ZNB6 911 aa17.99■□□□□ 0.47
C9orf3-217ENST00000479161 ANKLE1Q8NAG6 615 aa17.99■□□□□ 0.47
C9orf3-217ENST00000479161 CLEC4DQ8WXI8 215 aa17.99■□□□□ 0.47
C9orf3-217ENST00000479161 JAKMIP1Q96N16 626 aaKnown RBP17.99■□□□□ 0.47
C9orf3-217ENST00000479161 ZSWIM6Q9HCJ5 1215 aa17.99■□□□□ 0.47
C9orf3-217ENST00000479161 CYP39A1Q9NYL5 469 aa17.99■□□□□ 0.47
C9orf3-217ENST00000479161 PGK2P07205 417 aa17.98■□□□□ 0.47
C9orf3-217ENST00000479161 CYBAP13498 195 aa17.98■□□□□ 0.47
C9orf3-217ENST00000479161 RPS6KB1P23443 525 aa17.98■□□□□ 0.47
C9orf3-217ENST00000479161 SOX10P56693 466 aa17.98■□□□□ 0.47
C9orf3-217ENST00000479161 SNAP25P60880 206 aa17.98■□□□□ 0.47
C9orf3-217ENST00000479161 TRIM32Q13049 653 aa17.98■□□□□ 0.47
C9orf3-217ENST00000479161 QRICH1Q2TAL8 776 aa17.98■□□□□ 0.47
C9orf3-217ENST00000479161 MUM1L1Q5H9M0 696 aa17.98■□□□□ 0.47
C9orf3-217ENST00000479161 APOA5Q6Q788 366 aa17.98■□□□□ 0.47
C9orf3-217ENST00000479161 FBXO11Q86XK2 927 aa17.98■□□□□ 0.47
C9orf3-217ENST00000479161 FANCBQ8NB91 859 aa17.98■□□□□ 0.47
C9orf3-217ENST00000479161 U2AF1L4Q8WU68 220 aaKnown RBP17.98■□□□□ 0.47
C9orf3-217ENST00000479161 AMNQ9BXJ7 453 aa17.98■□□□□ 0.47
C9orf3-217ENST00000479161 GPHNQ9NQX3 736 aaPredicted RBP17.98■□□□□ 0.47
C9orf3-217ENST00000479161 MRPL11Q9Y3B7 192 aaKnown RBP17.98■□□□□ 0.47
C9orf3-217ENST00000479161 PNMA6FA0A0J9YX94 578 aa17.97■□□□□ 0.47
C9orf3-217ENST00000479161 POTEB2H3BUK9 544 aa17.97■□□□□ 0.47
C9orf3-217ENST00000479161 CYTH3O43739 400 aa17.97■□□□□ 0.47
C9orf3-217ENST00000479161 RUFY3Q7L099 469 aa17.97■□□□□ 0.47
C9orf3-217ENST00000479161 MCF2L2Q86YR7 1114 aa17.97■□□□□ 0.47
C9orf3-217ENST00000479161 TEX2Q8IWB9 1127 aa17.97■□□□□ 0.47
C9orf3-217ENST00000479161 MORC4Q8TE76 937 aa17.97■□□□□ 0.47
C9orf3-217ENST00000479161 FGD4Q96M96 766 aa17.97■□□□□ 0.47
C9orf3-217ENST00000479161 CPVLQ9H3G5 476 aa17.97■□□□□ 0.47
C9orf3-217ENST00000479161 HOMER2Q9NSB8 354 aa17.97■□□□□ 0.47
C9orf3-217ENST00000479161 RBM28Q9NW13 759 aaKnown RBP17.97■□□□□ 0.47
C9orf3-217ENST00000479161 OGDHLQ9ULD0 1010 aa17.97■□□□□ 0.47
C9orf3-217ENST00000479161 MCM3APO60318 1980 aa17.97■□□□□ 0.47
C9orf3-217ENST00000479161 LCTP09848 1927 aa17.96■□□□□ 0.47
C9orf3-217ENST00000479161 NID2Q14112 1375 aa17.96■□□□□ 0.47
C9orf3-217ENST00000479161 ASB14A6NK59 587 aa17.96■□□□□ 0.47
C9orf3-217ENST00000479161 CYP2C19P33261 490 aa17.96■□□□□ 0.47
C9orf3-217ENST00000479161 SLC4A3P48751 1232 aa17.96■□□□□ 0.47
C9orf3-217ENST00000479161 LHX8Q68G74 356 aa17.96■□□□□ 0.47
C9orf3-217ENST00000479161 UBE2Q1Q7Z7E8 422 aa17.96■□□□□ 0.47
C9orf3-217ENST00000479161 DNERQ8NFT8 737 aa17.96■□□□□ 0.47
C9orf3-217ENST00000479161 NUP133Q8WUM0 1156 aa17.96■□□□□ 0.47
C9orf3-217ENST00000479161 DEFB118Q96PH6 123 aa17.96■□□□□ 0.47
C9orf3-217ENST00000479161 ABHD16BQ9H3Z7 469 aa17.96■□□□□ 0.47
C9orf3-217ENST00000479161 ADD3Q9UEY8 706 aaKnown RBP17.96■□□□□ 0.47
C9orf3-217ENST00000479161 MKI67P46013 3256 aaKnown RBP17.96■□□□□ 0.46
C9orf3-217ENST00000479161 NFIBO00712 420 aa17.95■□□□□ 0.46
C9orf3-217ENST00000479161 SEPT4O43236 478 aa17.95■□□□□ 0.46
C9orf3-217ENST00000479161 ZBTB43O43298 467 aa17.95■□□□□ 0.46
C9orf3-217ENST00000479161 DHX16O60231 1041 aaKnown RBP17.95■□□□□ 0.46
C9orf3-217ENST00000479161 EN2P19622 333 aaPredicted RBP17.95■□□□□ 0.46
C9orf3-217ENST00000479161 CASTP20810 708 aaKnown RBP17.95■□□□□ 0.46
C9orf3-217ENST00000479161 SLC35G1Q2M3R5 365 aa17.95■□□□□ 0.46
C9orf3-217ENST00000479161 SHISA4Q96DD7 197 aa17.95■□□□□ 0.46
C9orf3-217ENST00000479161 LRRC2Q9BYS8 371 aa17.95■□□□□ 0.46
C9orf3-217ENST00000479161 ALDH8A1Q9H2A2 487 aaPredicted RBP17.95■□□□□ 0.46
C9orf3-217ENST00000479161 VAT1LQ9HCJ6 419 aa17.95■□□□□ 0.46
C9orf3-217ENST00000479161 CYP46A1Q9Y6A2 500 aa17.95■□□□□ 0.46
C9orf3-217ENST00000479161 FRMPD3Q5JV73 1810 aa17.95■□□□□ 0.46
C9orf3-217ENST00000479161 CCDC196A0A1B0GTZ2 297 aa17.94■□□□□ 0.46
C9orf3-217ENST00000479161 SNAI1O95863 264 aaPredicted RBP17.94■□□□□ 0.46
C9orf3-217ENST00000479161 BAATQ14032 418 aaPredicted RBP17.94■□□□□ 0.46
C9orf3-217ENST00000479161 RNF207Q6ZRF8 634 aa17.94■□□□□ 0.46
C9orf3-217ENST00000479161 TMTC3Q6ZXV5 915 aa17.94■□□□□ 0.46
C9orf3-217ENST00000479161 DDX20Q9UHI6 824 aaKnown RBP17.94■□□□□ 0.46
C9orf3-217ENST00000479161 BRPF3Q9ULD4 1205 aa17.94■□□□□ 0.46
C9orf3-217ENST00000479161 CNPY2Q9Y2B0 182 aa17.94■□□□□ 0.46
C9orf3-217ENST00000479161 SOWAHBA6NEL2 793 aa17.93■□□□□ 0.46
C9orf3-217ENST00000479161 B4DLN1 442 aa17.93■□□□□ 0.46
C9orf3-217ENST00000479161 ZNF865P0CJ78 1059 aaPredicted RBP17.93■□□□□ 0.46
C9orf3-217ENST00000479161 CCND3P30281 292 aaPredicted RBP17.93■□□□□ 0.46
C9orf3-217ENST00000479161 MRPL12P52815 198 aaKnown RBP17.93■□□□□ 0.46
C9orf3-217ENST00000479161 RPS6P62753 249 aaKnown RBP17.93■□□□□ 0.46
C9orf3-217ENST00000479161 FGD1P98174 961 aa17.93■□□□□ 0.46
C9orf3-217ENST00000479161 CNTN2Q02246 1040 aa17.93■□□□□ 0.46
C9orf3-217ENST00000479161 NSMFQ6X4W1 530 aa17.93■□□□□ 0.46
C9orf3-217ENST00000479161 Q6ZUG5 572 aa17.93■□□□□ 0.46
C9orf3-217ENST00000479161 SRBD1Q8N5C6 995 aaKnown RBP17.93■□□□□ 0.46
C9orf3-217ENST00000479161 TRPV1Q8NER1 839 aa17.93■□□□□ 0.46
C9orf3-217ENST00000479161 RRP36Q96EU6 259 aaKnown RBP17.93■□□□□ 0.46
C9orf3-217ENST00000479161 PIGSQ96S52 555 aa17.93■□□□□ 0.46
C9orf3-217ENST00000479161 MYL10Q9BUA6 226 aa17.93■□□□□ 0.46
C9orf3-217ENST00000479161 PCDHA1Q9Y5I3 950 aa17.93■□□□□ 0.46
C9orf3-217ENST00000479161 PPP1R11O60927 126 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms