RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 FAM129BQ96TA1 746 aa11.97□□□□□ -0.49
EWSR1-216ENST00000479135 RPN1P04843 607 aaKnown RBP11.97□□□□□ -0.49
EWSR1-216ENST00000479135 HLA-DOAP06340 250 aa11.97□□□□□ -0.49
EWSR1-216ENST00000479135 ZYG11AQ6WRX3 759 aa11.97□□□□□ -0.49
EWSR1-216ENST00000479135 SLC7A5P2Q9GIP4 190 aa11.97□□□□□ -0.49
EWSR1-216ENST00000479135 KLC2Q9H0B6 622 aa11.97□□□□□ -0.49
EWSR1-216ENST00000479135 SPATA2Q9UM82 520 aa11.97□□□□□ -0.49
EWSR1-216ENST00000479135 SMARCA1P28370 1054 aa11.97□□□□□ -0.49
EWSR1-216ENST00000479135 SOX5P35711 763 aa11.97□□□□□ -0.49
EWSR1-216ENST00000479135 CCDC157Q569K6 752 aa11.97□□□□□ -0.49
EWSR1-216ENST00000479135 CDH24Q86UP0 819 aa11.97□□□□□ -0.49
EWSR1-216ENST00000479135 ZNF496Q96IT1 587 aaPredicted RBP11.97□□□□□ -0.49
EWSR1-216ENST00000479135 LSG1Q9H089 658 aaKnown RBP11.97□□□□□ -0.49
EWSR1-216ENST00000479135 TADA3O75528 432 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 APOA1P02647 267 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 RPS6P62753 249 aaKnown RBP11.96□□□□□ -0.49
EWSR1-216ENST00000479135 EIF2B5Q13144 721 aaKnown RBP11.96□□□□□ -0.49
EWSR1-216ENST00000479135 TRIM69Q86WT6 500 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 LEMD2Q8NC56 503 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 ADNPQ9H2P0 1102 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 APOA4P06727 396 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 WTAPQ15007 396 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 TMED2Q15363 201 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 NLRP14Q86W24 1093 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 SECISBP2LQ93073 1101 aaKnown RBP11.96□□□□□ -0.49
EWSR1-216ENST00000479135 BRD8Q9H0E9 1235 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 NCOA1Q15788 1441 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 ITGA3P26006 1051 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 CYTH1Q15438 398 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 ZNF174Q15697 407 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 ZYXQ15942 572 aaKnown RBP11.96□□□□□ -0.49
EWSR1-216ENST00000479135 TRIM71Q2Q1W2 868 aaKnown RBP11.96□□□□□ -0.49
EWSR1-216ENST00000479135 MTERF2Q49AM1 385 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 ZNF530Q6P9A1 599 aaPredicted RBP11.96□□□□□ -0.49
EWSR1-216ENST00000479135 TBC1D32Q96NH3 1257 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 TMOD4Q9NZQ9 345 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 PACSIN2Q9UNF0 486 aaPredicted RBP11.96□□□□□ -0.49
EWSR1-216ENST00000479135 HYOU1Q9Y4L1 999 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 GYS1P13807 737 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 EIF2S3P41091 472 aaKnown RBP11.96□□□□□ -0.49
EWSR1-216ENST00000479135 TYW1BQ6NUM6 668 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 IGSF22Q8N9C0 903 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 DNAJC7Q99615 494 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 PAGR1Q9BTK6 254 aa11.96□□□□□ -0.49
EWSR1-216ENST00000479135 SCGNO76038 276 aa11.96□□□□□ -0.5
EWSR1-216ENST00000479135 DDHD2O94830 711 aa11.96□□□□□ -0.5
EWSR1-216ENST00000479135 TAF5Q15542 800 aa11.96□□□□□ -0.5
EWSR1-216ENST00000479135 ELMSAN1Q6PJG2 1045 aa11.96□□□□□ -0.5
EWSR1-216ENST00000479135 MTERF3Q96E29 417 aa11.96□□□□□ -0.5
EWSR1-216ENST00000479135 SIKE1Q9BRV8 207 aa11.96□□□□□ -0.5
EWSR1-216ENST00000479135 UTP6Q9NYH9 597 aaKnown RBP11.96□□□□□ -0.5
EWSR1-216ENST00000479135 VWA3AA6NCI4 1184 aa11.96□□□□□ -0.5
EWSR1-216ENST00000479135 NBPF7P0C2Y1 421 aaPredicted RBP11.96□□□□□ -0.5
EWSR1-216ENST00000479135 PDE1BQ01064 536 aa11.96□□□□□ -0.5
EWSR1-216ENST00000479135 CCDC103Q8IW40 242 aa11.96□□□□□ -0.5
EWSR1-216ENST00000479135 SUPT20HQ8NEM7 779 aa11.96□□□□□ -0.5
EWSR1-216ENST00000479135 NOX5Q96PH1 765 aa11.96□□□□□ -0.5
EWSR1-216ENST00000479135 MPP6Q9NZW5 540 aa11.96□□□□□ -0.5
EWSR1-216ENST00000479135 GSNP06396 782 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 MYCLP12524 364 aaPredicted RBP11.95□□□□□ -0.5
EWSR1-216ENST00000479135 MCM5P33992 734 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 PEX26Q7Z412 305 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 ZMYND10O75800 440 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 CAPZA2P47755 286 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 TYRO3Q06418 890 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 BNIPLQ7Z465 357 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.95□□□□□ -0.5
EWSR1-216ENST00000479135 SH2B1Q9NRF2 756 aaPredicted RBP11.95□□□□□ -0.5
EWSR1-216ENST00000479135 F5H423 210 aaPredicted RBP11.95□□□□□ -0.5
EWSR1-216ENST00000479135 NRG3P56975 720 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 SYTL3Q4VX76 610 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 SLCO1A2P46721 670 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 ATXN3P54252 364 aaPredicted RBP11.95□□□□□ -0.5
EWSR1-216ENST00000479135 PRPSAP1Q14558 356 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 EXOC8Q8IYI6 725 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 MMS19Q96T76 1030 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 SLF1Q9BQI6 1058 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 ATP6V0A4Q9HBG4 840 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 KRT87PA6NCN2 255 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 SNAP25P60880 206 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 LRRC36Q1X8D7 754 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 NELFCDQ8IXH7 590 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 ZKSCAN5Q9Y2L8 839 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 EXOC5O00471 708 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 MTRF1O75570 445 aaKnown RBP11.95□□□□□ -0.5
EWSR1-216ENST00000479135 PTK2BQ14289 1009 aa11.95□□□□□ -0.5
EWSR1-216ENST00000479135 EHBP1L1Q8N3D4 1523 aa11.94□□□□□ -0.5
EWSR1-216ENST00000479135 KCNK3O14649 394 aa11.94□□□□□ -0.5
EWSR1-216ENST00000479135 GPR1P46091 355 aa11.94□□□□□ -0.5
EWSR1-216ENST00000479135 EIF6P56537 245 aaKnown RBP11.94□□□□□ -0.5
EWSR1-216ENST00000479135 PAK2Q13177 524 aa11.94□□□□□ -0.5
EWSR1-216ENST00000479135 VN1R5Q7Z5H4 357 aa11.94□□□□□ -0.5
EWSR1-216ENST00000479135 RNF41Q9H4P4 317 aaPredicted RBP11.94□□□□□ -0.5
EWSR1-216ENST00000479135 LMCD1Q9NZU5 365 aa11.94□□□□□ -0.5
EWSR1-216ENST00000479135 F6X3S4 739 aa11.94□□□□□ -0.5
EWSR1-216ENST00000479135 HSPD1P10809 573 aaKnown RBP11.94□□□□□ -0.5
EWSR1-216ENST00000479135 RBBP4Q09028 425 aa11.94□□□□□ -0.5
EWSR1-216ENST00000479135 STRN3Q13033 797 aa11.94□□□□□ -0.5
EWSR1-216ENST00000479135 DNAJC17Q9NVM6 304 aaKnown RBP11.94□□□□□ -0.5
EWSR1-216ENST00000479135 AREL1O15033 823 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms