RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 CLGNO14967 610 aa15.78■□□□□ 0.12
CCDC78-210ENST00000478979 CYTH3O43739 400 aa15.78■□□□□ 0.12
CCDC78-210ENST00000478979 RAD21O60216 631 aa15.78■□□□□ 0.12
CCDC78-210ENST00000478979 FXR1P51114 621 aaKnown RBP eCLIP15.78■□□□□ 0.12
CCDC78-210ENST00000478979 LETM2Q2VYF4 491 aa15.78■□□□□ 0.12
CCDC78-210ENST00000478979 SLC10A5Q5PT55 438 aa15.78■□□□□ 0.12
CCDC78-210ENST00000478979 NELFBQ8WX92 580 aa15.78■□□□□ 0.12
CCDC78-210ENST00000478979 GDAP1L1Q96MZ0 367 aa15.78■□□□□ 0.12
CCDC78-210ENST00000478979 NAA15Q9BXJ9 866 aaKnown RBP15.78■□□□□ 0.12
CCDC78-210ENST00000478979 UBA5Q9GZZ9 404 aa15.78■□□□□ 0.12
CCDC78-210ENST00000478979 BANK1Q8NDB2 785 aa15.77■□□□□ 0.12
CCDC78-210ENST00000478979 SPATA20Q8TB22 786 aa15.77■□□□□ 0.12
CCDC78-210ENST00000478979 NUP88Q99567 741 aaPredicted RBP15.77■□□□□ 0.12
CCDC78-210ENST00000478979 A0A1B0GTH6 734 aa15.77■□□□□ 0.11
CCDC78-210ENST00000478979 RNF225M0QZC1 329 aaPredicted RBP15.77■□□□□ 0.11
CCDC78-210ENST00000478979 RIMBP2O15034 1052 aa15.77■□□□□ 0.11
CCDC78-210ENST00000478979 KRT31Q15323 416 aa15.77■□□□□ 0.11
CCDC78-210ENST00000478979 CCDC148Q8NFR7 591 aa15.77■□□□□ 0.11
CCDC78-210ENST00000478979 RABEP2Q9H5N1 569 aa15.77■□□□□ 0.11
CCDC78-210ENST00000478979 EBAG9O00559 213 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 FGRP09769 529 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 SLURP2P0DP57 97 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 ERCC5P28715 1186 aaPredicted RBP15.76■□□□□ 0.11
CCDC78-210ENST00000478979 BTDP43251 543 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 FILIP1LQ4L180 1135 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 TRAPPC3LQ5T215 181 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 APTXQ7Z2E3 356 aaKnown RBP15.76■□□□□ 0.11
CCDC78-210ENST00000478979 AMOTL1Q8IY63 956 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 TMEM47Q9BQJ4 181 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 ZC3H4Q9UPT8 1303 aaKnown RBP15.76■□□□□ 0.11
CCDC78-210ENST00000478979 MYH8P13535 1937 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 SEMA3EO15041 775 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 SHOX2O60902 331 aaPredicted RBP15.76■□□□□ 0.11
CCDC78-210ENST00000478979 GGCXP38435 758 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 PDXDC2PQ6P474 469 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 SH3RF1Q7Z6J0 888 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 RPGRQ92834 1020 aaKnown RBP15.76■□□□□ 0.11
CCDC78-210ENST00000478979 GSDMAQ96QA5 445 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 DONSONQ9NYP3 566 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 ADD3Q9UEY8 706 aaKnown RBP15.76■□□□□ 0.11
CCDC78-210ENST00000478979 MAD2L2Q9UI95 211 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 MYO6Q9UM54 1294 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 FRMPD2Q68DX3 1309 aaPredicted RBP15.76■□□□□ 0.11
CCDC78-210ENST00000478979 CASZ1Q86V15 1759 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 RPN1P04843 607 aaKnown RBP15.76■□□□□ 0.11
CCDC78-210ENST00000478979 UBA7P41226 1012 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 PRCPP42785 496 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 NAPAP54920 295 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 GPSM2P81274 684 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 STIM1Q13586 685 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 HPS3Q969F9 1004 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 EHD4Q9H223 541 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 TTF2Q9UNY4 1162 aaKnown RBP15.76■□□□□ 0.11
CCDC78-210ENST00000478979 TFR2Q9UP52 801 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 CNTNAP4Q9C0A0 1308 aa15.76■□□□□ 0.11
CCDC78-210ENST00000478979 SPTY2D1Q68D10 685 aaPredicted RBP15.75■□□□□ 0.11
CCDC78-210ENST00000478979 DTHD1Q6ZMT9 781 aa15.75■□□□□ 0.11
CCDC78-210ENST00000478979 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.75■□□□□ 0.11
CCDC78-210ENST00000478979 TEX11Q8IYF3 940 aa15.75■□□□□ 0.11
CCDC78-210ENST00000478979 PCDHA4Q9UN74 947 aa15.75■□□□□ 0.11
CCDC78-210ENST00000478979 SCN7AQ01118 1682 aa15.75■□□□□ 0.11
CCDC78-210ENST00000478979 KLRF2D3W0D1 207 aa15.75■□□□□ 0.11
CCDC78-210ENST00000478979 C6orf229H3BNL8 230 aa15.75■□□□□ 0.11
CCDC78-210ENST00000478979 MFAP3LO75121 409 aa15.75■□□□□ 0.11
CCDC78-210ENST00000478979 PMS1P54277 932 aaKnown RBP15.75■□□□□ 0.11
CCDC78-210ENST00000478979 AMPD2Q01433 879 aa15.75■□□□□ 0.11
CCDC78-210ENST00000478979 PAK1Q13153 545 aa15.75■□□□□ 0.11
CCDC78-210ENST00000478979 FAM76AQ8TAV0 307 aa15.75■□□□□ 0.11
CCDC78-210ENST00000478979 USP21Q9UK80 565 aa15.75■□□□□ 0.11
CCDC78-210ENST00000478979 LAMB2P55268 1798 aa15.75■□□□□ 0.11
CCDC78-210ENST00000478979 UTRNP46939 3433 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 CCNT1O60563 726 aaKnown RBP15.74■□□□□ 0.11
CCDC78-210ENST00000478979 BAG3O95817 575 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 BMP15O95972 392 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 GYPCP04921 128 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 IRAK1P51617 712 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 USP14P54578 494 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 ATP2B2Q01814 1243 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 COG1Q8WTW3 980 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 SUFUQ9UMX1 484 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 PCDHA6Q9UN73 950 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 PCDHA8Q9Y5H6 950 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 NRAPQ86VF7 1730 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 USP8P40818 1118 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 UBXN1Q04323 297 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 EYA3Q99504 573 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 BIN2Q9UBW5 565 aaPredicted RBP15.74■□□□□ 0.11
CCDC78-210ENST00000478979 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.74■□□□□ 0.11
CCDC78-210ENST00000478979 KCNJ18B7U540 433 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 UBAP1LF5GYI3 381 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 KCNJ12Q14500 433 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 MAP9Q49MG5 647 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 GSPT2Q8IYD1 628 aaKnown RBP15.74■□□□□ 0.11
CCDC78-210ENST00000478979 WDR66Q8TBY9 1149 aa15.74■□□□□ 0.11
CCDC78-210ENST00000478979 AHDC1Q5TGY3 1603 aaPredicted RBP15.73■□□□□ 0.11
CCDC78-210ENST00000478979 ZMYND10O75800 440 aa15.73■□□□□ 0.11
CCDC78-210ENST00000478979 PCP11498 1178 aaKnown RBP15.73■□□□□ 0.11
CCDC78-210ENST00000478979 RASA1P20936 1047 aa15.73■□□□□ 0.11
CCDC78-210ENST00000478979 INPP5BP32019 993 aa15.73■□□□□ 0.11
CCDC78-210ENST00000478979 ARHGAP25P42331 645 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms