RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 LCTP09848 1927 aa15.65■□□□□ 0.1
VCL-205ENST00000478896 SOWAHBA6NEL2 793 aa15.65■□□□□ 0.1
VCL-205ENST00000478896 FOXP2O15409 715 aa15.65■□□□□ 0.1
VCL-205ENST00000478896 ZEB2O60315 1214 aa15.65■□□□□ 0.1
VCL-205ENST00000478896 CDK7P50613 346 aa15.65■□□□□ 0.1
VCL-205ENST00000478896 RRP1P56182 461 aaKnown RBP15.65■□□□□ 0.1
VCL-205ENST00000478896 MUM1L1Q5H9M0 696 aa15.65■□□□□ 0.1
VCL-205ENST00000478896 FBXO16Q8IX29 292 aaPredicted RBP15.65■□□□□ 0.1
VCL-205ENST00000478896 FAM126BQ8IXS8 530 aa15.65■□□□□ 0.1
VCL-205ENST00000478896 DCAF4Q8WV16 495 aa15.65■□□□□ 0.1
VCL-205ENST00000478896 AP5M1Q9H0R1 490 aa15.65■□□□□ 0.1
VCL-205ENST00000478896 SALL3Q9BXA9 1300 aa15.65■□□□□ 0.1
VCL-205ENST00000478896 CSF2RAP15509 400 aa15.64■□□□□ 0.09
VCL-205ENST00000478896 PSRC1Q6PGN9 363 aaPredicted RBP15.64■□□□□ 0.09
VCL-205ENST00000478896 CXCL17Q6UXB2 119 aa15.64■□□□□ 0.09
VCL-205ENST00000478896 TIFAQ96CG3 184 aa15.64■□□□□ 0.09
VCL-205ENST00000478896 HELLSQ9NRZ9 838 aa15.64■□□□□ 0.09
VCL-205ENST00000478896 CYP39A1Q9NYL5 469 aa15.64■□□□□ 0.09
VCL-205ENST00000478896 ANAPC4Q9UJX5 808 aa15.64■□□□□ 0.09
VCL-205ENST00000478896 GNEQ9Y223 722 aaKnown RBP15.64■□□□□ 0.09
VCL-205ENST00000478896 DDX49Q9Y6V7 483 aaKnown RBP15.64■□□□□ 0.09
VCL-205ENST00000478896 ASTN1O14525 1302 aa15.64■□□□□ 0.09
VCL-205ENST00000478896 FRMPD2Q68DX3 1309 aaPredicted RBP15.64■□□□□ 0.09
VCL-205ENST00000478896 CTAGE5O15320 804 aa15.63■□□□□ 0.09
VCL-205ENST00000478896 DYNC1LI2O43237 492 aaPredicted RBP15.63■□□□□ 0.09
VCL-205ENST00000478896 ORC4O43929 436 aa15.63■□□□□ 0.09
VCL-205ENST00000478896 CABYRO75952 493 aa15.63■□□□□ 0.09
VCL-205ENST00000478896 ICAM1P05362 532 aa15.63■□□□□ 0.09
VCL-205ENST00000478896 SMPD1P17405 629 aa15.63■□□□□ 0.09
VCL-205ENST00000478896 FSCN1Q16658 493 aaKnown RBP15.63■□□□□ 0.09
VCL-205ENST00000478896 ACRP10323 421 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 SLC16A2P36021 539 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 PDE1AP54750 535 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 NKX3-2P78367 333 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 ITGA7Q13683 1181 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 GRIN2CQ14957 1233 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 MCMDC2Q4G0Z9 681 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 TMEM240Q5SV17 173 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 SYDE2Q5VT97 1194 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 TTBK2Q6IQ55 1244 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 KIAA1211Q6ZU35 1233 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 FAM227BQ96M60 508 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 CRBNQ96SW2 442 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 MTIF3Q9H2K0 278 aaKnown RBP15.62■□□□□ 0.09
VCL-205ENST00000478896 RANBP17Q9H2T7 1088 aaKnown RBP15.62■□□□□ 0.09
VCL-205ENST00000478896 HIPK3Q9H422 1215 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 ZNF576Q9H609 170 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 VTA1Q9NP79 307 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 PDGFCQ9NRA1 345 aa15.62■□□□□ 0.09
VCL-205ENST00000478896 ADD3Q9UEY8 706 aaKnown RBP15.62■□□□□ 0.09
VCL-205ENST00000478896 A0A0D9SFI3 127 aa15.61■□□□□ 0.09
VCL-205ENST00000478896 PTPDC1A2A3K4 754 aa15.61■□□□□ 0.09
VCL-205ENST00000478896 TRIM6-TRIM34B2RNG4 842 aa15.61■□□□□ 0.09
VCL-205ENST00000478896 CD4P01730 458 aa15.61■□□□□ 0.09
VCL-205ENST00000478896 TOP1P11387 765 aaKnown RBP15.61■□□□□ 0.09
VCL-205ENST00000478896 PTGS1P23219 599 aa15.61■□□□□ 0.09
VCL-205ENST00000478896 CYP2C18P33260 490 aa15.61■□□□□ 0.09
VCL-205ENST00000478896 ALX1Q15699 326 aa15.61■□□□□ 0.09
VCL-205ENST00000478896 IQSEC1Q6DN90 963 aa15.61■□□□□ 0.09
VCL-205ENST00000478896 ZNF365Q70YC5 407 aa15.61■□□□□ 0.09
VCL-205ENST00000478896 PURBQ96QR8 312 aaKnown RBP15.61■□□□□ 0.09
VCL-205ENST00000478896 TMEM47Q9BQJ4 181 aa15.61■□□□□ 0.09
VCL-205ENST00000478896 GPCPD1Q9NPB8 672 aa15.61■□□□□ 0.09
VCL-205ENST00000478896 FGAP02671 866 aa15.6■□□□□ 0.09
VCL-205ENST00000478896 NOVP48745 357 aa15.6■□□□□ 0.09
VCL-205ENST00000478896 ALDH5A1P51649 535 aaPredicted RBP15.6■□□□□ 0.09
VCL-205ENST00000478896 HAND2P61296 217 aa15.6■□□□□ 0.09
VCL-205ENST00000478896 BAATQ14032 418 aaPredicted RBP15.6■□□□□ 0.09
VCL-205ENST00000478896 TAPT1Q6NXT6 567 aa15.6■□□□□ 0.09
VCL-205ENST00000478896 GAS2L1Q99501 681 aaPredicted RBP15.6■□□□□ 0.09
VCL-205ENST00000478896 PBX4Q9BYU1 374 aa15.6■□□□□ 0.09
VCL-205ENST00000478896 IL23AQ9NPF7 189 aa15.6■□□□□ 0.09
VCL-205ENST00000478896 Q9Y3F1 56 aa15.6■□□□□ 0.09
VCL-205ENST00000478896 CDH23Q9H251 3354 aa15.6■□□□□ 0.09
VCL-205ENST00000478896 GBF1Q92538 1859 aa15.59■□□□□ 0.09
VCL-205ENST00000478896 GRXCR1A8MXD5 290 aa15.59■□□□□ 0.09
VCL-205ENST00000478896 NFIBO00712 420 aa15.59■□□□□ 0.09
VCL-205ENST00000478896 B4GALT4O60513 344 aa15.59■□□□□ 0.09
VCL-205ENST00000478896 FGRP09769 529 aa15.59■□□□□ 0.09
VCL-205ENST00000478896 HSPD1P10809 573 aaKnown RBP15.59■□□□□ 0.09
VCL-205ENST00000478896 CALML3P27482 149 aa15.59■□□□□ 0.09
VCL-205ENST00000478896 PBX2P40425 430 aa15.59■□□□□ 0.09
VCL-205ENST00000478896 PSMC6P62333 389 aa15.59■□□□□ 0.09
VCL-205ENST00000478896 NMIQ13287 307 aaPredicted RBP15.59■□□□□ 0.09
VCL-205ENST00000478896 BTNL9Q6UXG8 535 aa15.59■□□□□ 0.09
VCL-205ENST00000478896 C16orf59Q7L2K0 433 aa15.59■□□□□ 0.09
VCL-205ENST00000478896 ZNF589Q86UQ0 364 aaPredicted RBP15.59■□□□□ 0.09
VCL-205ENST00000478896 SLC43A3Q8NBI5 491 aa15.59■□□□□ 0.09
VCL-205ENST00000478896 RILPL2Q969X0 211 aa15.59■□□□□ 0.09
VCL-205ENST00000478896 MPHOSPH6Q99547 160 aaKnown RBP15.59■□□□□ 0.09
VCL-205ENST00000478896 SEZ6LQ9BYH1 1024 aa15.59■□□□□ 0.09
VCL-205ENST00000478896 TCP11L1Q9NUJ3 509 aa15.59■□□□□ 0.09
VCL-205ENST00000478896 ZMYM6O95789 1325 aa15.59■□□□□ 0.09
VCL-205ENST00000478896 CCDC171Q6TFL3 1326 aa15.59■□□□□ 0.09
VCL-205ENST00000478896 LAMA2P24043 3122 aaKnown RBP15.58■□□□□ 0.08
VCL-205ENST00000478896 PDHBP11177 359 aa15.58■□□□□ 0.08
VCL-205ENST00000478896 CCL23P55773 120 aa15.58■□□□□ 0.08
VCL-205ENST00000478896 HDAC1Q13547 482 aaPredicted RBP15.58■□□□□ 0.08
VCL-205ENST00000478896 RAB30Q15771 203 aa15.58■□□□□ 0.08
VCL-205ENST00000478896 DUSP28Q4G0W2 176 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms