RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SIRT2Q8IXJ6 389 aa20.5■□□□□ 0.87
VIM-204ENST00000478746 MTMR4Q9NYA4 1195 aa20.5■□□□□ 0.87
VIM-204ENST00000478746 COG6Q9Y2V7 657 aa20.5■□□□□ 0.87
VIM-204ENST00000478746 MYH7P12883 1935 aa20.49■□□□□ 0.87
VIM-204ENST00000478746 MYH4Q9Y623 1939 aa20.49■□□□□ 0.87
VIM-204ENST00000478746 SOWAHBA6NEL2 793 aa20.49■□□□□ 0.87
VIM-204ENST00000478746 ERC2O15083 957 aa20.49■□□□□ 0.87
VIM-204ENST00000478746 BMP3P12645 472 aa20.49■□□□□ 0.87
VIM-204ENST00000478746 SMPD1P17405 629 aa20.49■□□□□ 0.87
VIM-204ENST00000478746 KCNQ1P51787 676 aa20.49■□□□□ 0.87
VIM-204ENST00000478746 SLFN13Q68D06 897 aa20.49■□□□□ 0.87
VIM-204ENST00000478746 IQSEC1Q6DN90 963 aa20.49■□□□□ 0.87
VIM-204ENST00000478746 GMCL1P1Q8NEA9 526 aa20.49■□□□□ 0.87
VIM-204ENST00000478746 CEP95Q96GE4 821 aa20.49■□□□□ 0.87
VIM-204ENST00000478746 SCLYQ96I15 445 aa20.49■□□□□ 0.87
VIM-204ENST00000478746 ZNF287Q9HBT7 754 aa20.49■□□□□ 0.87
VIM-204ENST00000478746 A1CFQ9NQ94 594 aaKnown RBP20.49■□□□□ 0.87
VIM-204ENST00000478746 SYNPO2Q9UMS6 1093 aa20.49■□□□□ 0.87
VIM-204ENST00000478746 XIRP2A4UGR9 3374 aa20.49■□□□□ 0.87
VIM-204ENST00000478746 TMEM232C9JQI7 657 aa20.48■□□□□ 0.87
VIM-204ENST00000478746 GTPBP6O43824 516 aaPredicted RBP20.48■□□□□ 0.87
VIM-204ENST00000478746 TTLL1O95922 423 aa20.48■□□□□ 0.87
VIM-204ENST00000478746 PSMC6P62333 389 aa20.48■□□□□ 0.87
VIM-204ENST00000478746 TMEM67Q5HYA8 995 aa20.48■□□□□ 0.87
VIM-204ENST00000478746 LRRC47Q8N1G4 583 aaKnown RBP20.48■□□□□ 0.87
VIM-204ENST00000478746 AGBL1Q96MI9 1066 aa20.48■□□□□ 0.87
VIM-204ENST00000478746 PDGFCQ9NRA1 345 aa20.48■□□□□ 0.87
VIM-204ENST00000478746 RNF146Q9NTX7 359 aa20.48■□□□□ 0.87
VIM-204ENST00000478746 ISY1Q9ULR0 285 aaKnown RBP20.48■□□□□ 0.87
VIM-204ENST00000478746 Q9Y3F1 56 aa20.48■□□□□ 0.87
VIM-204ENST00000478746 RFXAPO00287 272 aa20.47■□□□□ 0.87
VIM-204ENST00000478746 PRDM1O75626 825 aa20.47■□□□□ 0.87
VIM-204ENST00000478746 POU3F3P20264 500 aaPredicted RBP20.47■□□□□ 0.87
VIM-204ENST00000478746 PTGS1P23219 599 aa20.47■□□□□ 0.87
VIM-204ENST00000478746 TKFCQ3LXA3 575 aa20.47■□□□□ 0.87
VIM-204ENST00000478746 CHURC1Q8WUH1 139 aa20.47■□□□□ 0.87
VIM-204ENST00000478746 VWCEQ96DN2 955 aa20.47■□□□□ 0.87
VIM-204ENST00000478746 TRERF1Q96PN7 1200 aa20.47■□□□□ 0.87
VIM-204ENST00000478746 MTCH2Q9Y6C9 303 aa20.47■□□□□ 0.87
VIM-204ENST00000478746 TRANK1O15050 2925 aa20.47■□□□□ 0.87
VIM-204ENST00000478746 PRRC2BQ5JSZ5 2229 aaKnown RBP20.47■□□□□ 0.87
VIM-204ENST00000478746 PFKMP08237 780 aa20.46■□□□□ 0.87
VIM-204ENST00000478746 SUPT20HL2P0C7V6 817 aa20.46■□□□□ 0.87
VIM-204ENST00000478746 HOXD11P31277 338 aaPredicted RBP20.46■□□□□ 0.87
VIM-204ENST00000478746 STAT2P52630 851 aa20.46■□□□□ 0.87
VIM-204ENST00000478746 IKQ13123 557 aaPredicted RBP20.46■□□□□ 0.87
VIM-204ENST00000478746 TTLL4Q14679 1199 aa20.46■□□□□ 0.87
VIM-204ENST00000478746 TAPT1Q6NXT6 567 aa20.46■□□□□ 0.87
VIM-204ENST00000478746 EEPD1Q7L9B9 569 aa20.46■□□□□ 0.87
VIM-204ENST00000478746 ALDH8A1Q9H2A2 487 aaPredicted RBP20.46■□□□□ 0.87
VIM-204ENST00000478746 MS4A1P11836 297 aa20.45■□□□□ 0.86
VIM-204ENST00000478746 ALAS1P13196 640 aa20.45■□□□□ 0.86
VIM-204ENST00000478746 KIAA1211Q6ZU35 1233 aa20.45■□□□□ 0.86
VIM-204ENST00000478746 DEFB128Q7Z7B8 93 aa20.45■□□□□ 0.86
VIM-204ENST00000478746 FAM160B2Q86V87 743 aa20.45■□□□□ 0.86
VIM-204ENST00000478746 STAG1Q8WVM7 1258 aa20.45■□□□□ 0.86
VIM-204ENST00000478746 OSBP2Q969R2 916 aa20.45■□□□□ 0.86
VIM-204ENST00000478746 EPHX3Q9H6B9 360 aa20.45■□□□□ 0.86
VIM-204ENST00000478746 CERS4Q9HA82 394 aa20.45■□□□□ 0.86
VIM-204ENST00000478746 COG5Q9UP83 839 aa20.45■□□□□ 0.86
VIM-204ENST00000478746 DDX49Q9Y6V7 483 aaKnown RBP20.45■□□□□ 0.86
VIM-204ENST00000478746 ZNF536O15090 1300 aa20.45■□□□□ 0.86
VIM-204ENST00000478746 APPP05067 770 aa20.44■□□□□ 0.86
VIM-204ENST00000478746 CA3P07451 260 aa20.44■□□□□ 0.86
VIM-204ENST00000478746 CYP2C9P11712 490 aa20.44■□□□□ 0.86
VIM-204ENST00000478746 TDO2P48775 406 aa20.44■□□□□ 0.86
VIM-204ENST00000478746 TMEM63BQ5T3F8 832 aa20.44■□□□□ 0.86
VIM-204ENST00000478746 FBXO16Q8IX29 292 aaPredicted RBP20.44■□□□□ 0.86
VIM-204ENST00000478746 LRFN3Q9BTN0 628 aa20.44■□□□□ 0.86
VIM-204ENST00000478746 ZBTB40Q9NUA8 1239 aa20.44■□□□□ 0.86
VIM-204ENST00000478746 ARIH1Q9Y4X5 557 aaPredicted RBP20.44■□□□□ 0.86
VIM-204ENST00000478746 TSPY3P0CV98 308 aa20.43■□□□□ 0.86
VIM-204ENST00000478746 TSPY8P0CW00 308 aa20.43■□□□□ 0.86
VIM-204ENST00000478746 ACTN1P12814 892 aa20.43■□□□□ 0.86
VIM-204ENST00000478746 GNAT2P19087 354 aa20.43■□□□□ 0.86
VIM-204ENST00000478746 NEDD1Q8NHV4 660 aa20.43■□□□□ 0.86
VIM-204ENST00000478746 APPBP2Q92624 585 aa20.43■□□□□ 0.86
VIM-204ENST00000478746 CHMP4CQ96CF2 233 aa20.43■□□□□ 0.86
VIM-204ENST00000478746 TRMT13Q9NUP7 481 aaKnown RBP20.43■□□□□ 0.86
VIM-204ENST00000478746 CYP39A1Q9NYL5 469 aa20.43■□□□□ 0.86
VIM-204ENST00000478746 HCN4Q9Y3Q4 1203 aa20.43■□□□□ 0.86
VIM-204ENST00000478746 MCCP23508 829 aa20.42■□□□□ 0.86
VIM-204ENST00000478746 SLC1A4P43007 532 aa20.42■□□□□ 0.86
VIM-204ENST00000478746 GMCL1Q96IK5 515 aa20.42■□□□□ 0.86
VIM-204ENST00000478746 EPB41L4AQ9HCS5 686 aaPredicted RBP20.42■□□□□ 0.86
VIM-204ENST00000478746 VTA1Q9NP79 307 aa20.42■□□□□ 0.86
VIM-204ENST00000478746 POLR3EQ9NVU0 708 aa20.42■□□□□ 0.86
VIM-204ENST00000478746 TNKSO95271 1327 aa20.42■□□□□ 0.86
VIM-204ENST00000478746 PATL2C9JE40 543 aaKnown RBP20.41■□□□□ 0.86
VIM-204ENST00000478746 TLL1O43897 1013 aa20.41■□□□□ 0.86
VIM-204ENST00000478746 TFAP4Q01664 338 aa20.41■□□□□ 0.86
VIM-204ENST00000478746 DUSP28Q4G0W2 176 aa20.41■□□□□ 0.86
VIM-204ENST00000478746 MUM1L1Q5H9M0 696 aa20.41■□□□□ 0.86
VIM-204ENST00000478746 KRT40Q6A162 431 aa20.41■□□□□ 0.86
VIM-204ENST00000478746 KBTBD3Q8NAB2 608 aa20.41■□□□□ 0.86
VIM-204ENST00000478746 PHOSPHO2Q8TCD6 241 aa20.41■□□□□ 0.86
VIM-204ENST00000478746 ARNTL2Q8WYA1 636 aa20.41■□□□□ 0.86
VIM-204ENST00000478746 SLC9A7Q96T83 725 aa20.41■□□□□ 0.86
VIM-204ENST00000478746 LRRCC1Q9C099 1032 aa20.41■□□□□ 0.86
VIM-204ENST00000478746 DDX19BQ9UMR2 479 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms