RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 KIF28PB7ZC32 967 aa17.25■□□□□ 0.35
USP11-207ENST00000478596 VWA5AO00534 786 aa17.25■□□□□ 0.35
USP11-207ENST00000478596 MPHOSPH10O00566 681 aaKnown RBP17.25■□□□□ 0.35
USP11-207ENST00000478596 ACTN1P12814 892 aa17.25■□□□□ 0.35
USP11-207ENST00000478596 IL9P15248 144 aa17.25■□□□□ 0.35
USP11-207ENST00000478596 CYP7A1P22680 504 aa17.25■□□□□ 0.35
USP11-207ENST00000478596 CXCL17Q6UXB2 119 aa17.25■□□□□ 0.35
USP11-207ENST00000478596 TMEM179Q6ZVK1 233 aa17.25■□□□□ 0.35
USP11-207ENST00000478596 HFE2Q6ZVN8 426 aa17.25■□□□□ 0.35
USP11-207ENST00000478596 SIAH1Q8IUQ4 282 aa17.25■□□□□ 0.35
USP11-207ENST00000478596 HERC6Q8IVU3 1022 aa17.25■□□□□ 0.35
USP11-207ENST00000478596 MAGEB6Q8N7X4 407 aa17.25■□□□□ 0.35
USP11-207ENST00000478596 REPS2Q8NFH8 660 aa17.25■□□□□ 0.35
USP11-207ENST00000478596 OSBPL3Q9H4L5 887 aa17.25■□□□□ 0.35
USP11-207ENST00000478596 SH2D4AQ9H788 454 aa17.25■□□□□ 0.35
USP11-207ENST00000478596 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.25■□□□□ 0.35
USP11-207ENST00000478596 GRXCR2A6NFK2 248 aa17.24■□□□□ 0.35
USP11-207ENST00000478596 LRRFIP1Q32MZ4 808 aaKnown RBP17.24■□□□□ 0.35
USP11-207ENST00000478596 PUS10Q3MIT2 529 aaKnown RBP17.24■□□□□ 0.35
USP11-207ENST00000478596 PTCRAQ6ISU1 281 aaPredicted RBP17.24■□□□□ 0.35
USP11-207ENST00000478596 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.24■□□□□ 0.35
USP11-207ENST00000478596 MYH1P12882 1939 aa17.23■□□□□ 0.35
USP11-207ENST00000478596 ZDBF2Q9HCK1 2354 aa17.23■□□□□ 0.35
USP11-207ENST00000478596 KCNA5P22460 613 aa17.23■□□□□ 0.35
USP11-207ENST00000478596 BEX3Q00994 111 aa17.23■□□□□ 0.35
USP11-207ENST00000478596 MIGA1Q8NAN2 632 aa17.23■□□□□ 0.35
USP11-207ENST00000478596 DDX11Q96FC9 970 aa17.23■□□□□ 0.35
USP11-207ENST00000478596 ARHGEF10LQ9HCE6 1279 aa17.23■□□□□ 0.35
USP11-207ENST00000478596 PIH1D3Q9NQM4 214 aaKnown RBP17.23■□□□□ 0.35
USP11-207ENST00000478596 ZNF536O15090 1300 aa17.22■□□□□ 0.35
USP11-207ENST00000478596 SPRED2Q7Z698 418 aa17.22■□□□□ 0.35
USP11-207ENST00000478596 ANKS1AQ92625 1134 aa17.22■□□□□ 0.35
USP11-207ENST00000478596 EVI5LQ96CN4 794 aa17.22■□□□□ 0.35
USP11-207ENST00000478596 FBXO28Q9NVF7 368 aa17.22■□□□□ 0.35
USP11-207ENST00000478596 PPP1R9AQ9ULJ8 1098 aa17.22■□□□□ 0.35
USP11-207ENST00000478596 ASTN1O14525 1302 aa17.21■□□□□ 0.35
USP11-207ENST00000478596 GSPT1P15170 499 aaKnown RBP17.21■□□□□ 0.35
USP11-207ENST00000478596 RFC2P35250 354 aa17.21■□□□□ 0.35
USP11-207ENST00000478596 PTPN5P54829 565 aa17.21■□□□□ 0.35
USP11-207ENST00000478596 ZSCAN25Q6NSZ9 544 aa17.21■□□□□ 0.35
USP11-207ENST00000478596 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.21■□□□□ 0.35
USP11-207ENST00000478596 DEFB128Q7Z7B8 93 aa17.21■□□□□ 0.35
USP11-207ENST00000478596 GDPD5Q8WTR4 605 aa17.21■□□□□ 0.35
USP11-207ENST00000478596 TEX13BQ9BXU2 312 aa17.21■□□□□ 0.35
USP11-207ENST00000478596 KATNBL1Q9H079 304 aa17.21■□□□□ 0.35
USP11-207ENST00000478596 ANTXR1Q9H6X2 564 aa17.21■□□□□ 0.35
USP11-207ENST00000478596 DIAPH3Q9NSV4 1193 aa17.21■□□□□ 0.35
USP11-207ENST00000478596 PARP14Q460N5 1801 aa17.21■□□□□ 0.35
USP11-207ENST00000478596 COL4A4P53420 1690 aaPredicted RBP17.2■□□□□ 0.34
USP11-207ENST00000478596 POLR3DP05423 398 aaPredicted RBP17.2■□□□□ 0.34
USP11-207ENST00000478596 ICA1Q05084 483 aa17.2■□□□□ 0.34
USP11-207ENST00000478596 FSCN1Q16658 493 aaKnown RBP17.2■□□□□ 0.34
USP11-207ENST00000478596 TMED8Q6PL24 325 aaPredicted RBP17.2■□□□□ 0.34
USP11-207ENST00000478596 CASC1Q6TDU7 716 aa17.2■□□□□ 0.34
USP11-207ENST00000478596 ARMCX2Q7L311 632 aa17.2■□□□□ 0.34
USP11-207ENST00000478596 PRSS33Q8NF86 280 aa17.2■□□□□ 0.34
USP11-207ENST00000478596 FGD4Q96M96 766 aa17.2■□□□□ 0.34
USP11-207ENST00000478596 ALDH8A1Q9H2A2 487 aaPredicted RBP17.2■□□□□ 0.34
USP11-207ENST00000478596 C19orf67A6NJJ6 358 aa17.19■□□□□ 0.34
USP11-207ENST00000478596 SUPT20HL2P0C7V6 817 aa17.19■□□□□ 0.34
USP11-207ENST00000478596 ZP2Q05996 745 aa17.19■□□□□ 0.34
USP11-207ENST00000478596 BMP2KLQ5H9B9 411 aa17.19■□□□□ 0.34
USP11-207ENST00000478596 KBTBD3Q8NAB2 608 aa17.19■□□□□ 0.34
USP11-207ENST00000478596 NEK9Q8TD19 979 aa17.19■□□□□ 0.34
USP11-207ENST00000478596 PRRX2Q99811 253 aa17.19■□□□□ 0.34
USP11-207ENST00000478596 PRKAG3Q9UGI9 489 aa17.19■□□□□ 0.34
USP11-207ENST00000478596 GNEQ9Y223 722 aaKnown RBP17.19■□□□□ 0.34
USP11-207ENST00000478596 ZEB2O60315 1214 aa17.18■□□□□ 0.34
USP11-207ENST00000478596 BAIAP3O94812 1187 aa17.18■□□□□ 0.34
USP11-207ENST00000478596 SDSP20132 328 aa17.18■□□□□ 0.34
USP11-207ENST00000478596 TNFAIP2Q03169 654 aa17.18■□□□□ 0.34
USP11-207ENST00000478596 SNRNP48Q6IEG0 339 aaKnown RBP17.18■□□□□ 0.34
USP11-207ENST00000478596 CLEC10AQ8IUN9 316 aa17.18■□□□□ 0.34
USP11-207ENST00000478596 SUGCTQ9HAC7 445 aa17.18■□□□□ 0.34
USP11-207ENST00000478596 RIPK3Q9Y572 518 aa17.18■□□□□ 0.34
USP11-207ENST00000478596 COL11A1P12107 1806 aaPredicted RBP17.18■□□□□ 0.34
USP11-207ENST00000478596 TRIOO75962 3097 aa17.17■□□□□ 0.34
USP11-207ENST00000478596 C5orf42Q9H799 3197 aa17.17■□□□□ 0.34
USP11-207ENST00000478596 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.17■□□□□ 0.34
USP11-207ENST00000478596 LCHNA4D1U4 455 aa17.17■□□□□ 0.34
USP11-207ENST00000478596 HIP1O00291 1037 aa17.17■□□□□ 0.34
USP11-207ENST00000478596 ATP2A1O14983 1001 aa17.17■□□□□ 0.34
USP11-207ENST00000478596 EVX2Q03828 476 aa17.17■□□□□ 0.34
USP11-207ENST00000478596 SLC9C2Q5TAH2 1124 aa17.17■□□□□ 0.34
USP11-207ENST00000478596 TLK2Q86UE8 772 aa17.17■□□□□ 0.34
USP11-207ENST00000478596 CCDC144CPQ8IYA2 1237 aa17.17■□□□□ 0.34
USP11-207ENST00000478596 RIOK1Q9BRS2 568 aaKnown RBP17.17■□□□□ 0.34
USP11-207ENST00000478596 UPF3BQ9BZI7 483 aaKnown RBP17.17■□□□□ 0.34
USP11-207ENST00000478596 SWAP70Q9UH65 585 aa17.17■□□□□ 0.34
USP11-207ENST00000478596 ZFHX2Q9C0A1 2572 aaPredicted RBP17.17■□□□□ 0.34
USP11-207ENST00000478596 GFRA3O60609 400 aa17.16■□□□□ 0.34
USP11-207ENST00000478596 ZFYP08048 801 aaPredicted RBP17.16■□□□□ 0.34
USP11-207ENST00000478596 CYP2C9P11712 490 aa17.16■□□□□ 0.34
USP11-207ENST00000478596 PDE6AP16499 860 aa17.16■□□□□ 0.34
USP11-207ENST00000478596 PSMC6P62333 389 aa17.16■□□□□ 0.34
USP11-207ENST00000478596 NOL8Q76FK4 1167 aaKnown RBP17.16■□□□□ 0.34
USP11-207ENST00000478596 TRMT13Q9NUP7 481 aaKnown RBP17.16■□□□□ 0.34
USP11-207ENST00000478596 FAM50BQ9Y247 325 aa17.16■□□□□ 0.34
USP11-207ENST00000478596 SPTBN4Q9H254 2564 aa17.16■□□□□ 0.34
USP11-207ENST00000478596 NAV1Q8NEY1 1877 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms