RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.12■■■□□ 2.57
CCM2-211ENST00000478582 HMX1Q9NP08 348 aaPredicted RBP31.12■■■□□ 2.57
CCM2-211ENST00000478582 RBM28Q9NW13 759 aaKnown RBP31.12■■■□□ 2.57
CCM2-211ENST00000478582 FBXO40Q9UH90 709 aa31.12■■■□□ 2.57
CCM2-211ENST00000478582 CYTH3O43739 400 aa31.11■■■□□ 2.57
CCM2-211ENST00000478582 CDC37Q16543 378 aaPredicted RBP31.11■■■□□ 2.57
CCM2-211ENST00000478582 RAB11FIP4Q86YS3 637 aa31.11■■■□□ 2.57
CCM2-211ENST00000478582 KIF2CQ99661 725 aa31.11■■■□□ 2.57
CCM2-211ENST00000478582 VAT1LQ9HCJ6 419 aa31.11■■■□□ 2.57
CCM2-211ENST00000478582 CCPG1Q9ULG6 757 aa31.11■■■□□ 2.57
CCM2-211ENST00000478582 NID2Q14112 1375 aa31.1■■■□□ 2.57
CCM2-211ENST00000478582 DHX16O60231 1041 aaKnown RBP31.1■■■□□ 2.57
CCM2-211ENST00000478582 HOXC6P09630 235 aa31.1■■■□□ 2.57
CCM2-211ENST00000478582 CCL14Q16627 93 aa31.1■■■□□ 2.57
CCM2-211ENST00000478582 MAP3K21Q5TCX8 1036 aa31.1■■■□□ 2.57
CCM2-211ENST00000478582 CCDC144CPQ8IYA2 1237 aa31.1■■■□□ 2.57
CCM2-211ENST00000478582 FCER1AP12319 257 aa31.09■■■□□ 2.57
CCM2-211ENST00000478582 QRICH1Q2TAL8 776 aa31.09■■■□□ 2.57
CCM2-211ENST00000478582 TMTC3Q6ZXV5 915 aa31.09■■■□□ 2.57
CCM2-211ENST00000478582 FAM217BQ9NTX9 383 aaPredicted RBP31.09■■■□□ 2.57
CCM2-211ENST00000478582 MKI67P46013 3256 aaKnown RBP31.08■■■□□ 2.57
CCM2-211ENST00000478582 GOLGA8AA7E2F4 631 aa31.08■■■□□ 2.57
CCM2-211ENST00000478582 GOLGA8BA8MQT2 603 aa31.08■■■□□ 2.57
CCM2-211ENST00000478582 ZBTB5O15062 677 aa31.08■■■□□ 2.57
CCM2-211ENST00000478582 PLEKHA8P1O95397 391 aa31.08■■■□□ 2.57
CCM2-211ENST00000478582 TFRCP02786 760 aaKnown RBP31.08■■■□□ 2.57
CCM2-211ENST00000478582 SLC4A3P48751 1232 aa31.08■■■□□ 2.57
CCM2-211ENST00000478582 RTN1Q16799 776 aa31.08■■■□□ 2.57
CCM2-211ENST00000478582 PRPF38BQ5VTL8 546 aaKnown RBP31.08■■■□□ 2.57
CCM2-211ENST00000478582 SRBD1Q8N5C6 995 aaKnown RBP31.08■■■□□ 2.57
CCM2-211ENST00000478582 ZNF274Q96GC6 653 aaPredicted RBP31.08■■■□□ 2.57
CCM2-211ENST00000478582 TRERF1Q96PN7 1200 aa31.08■■■□□ 2.57
CCM2-211ENST00000478582 CRISPLD2Q9H0B8 497 aa31.08■■■□□ 2.57
CCM2-211ENST00000478582 ALAS1P13196 640 aa31.07■■■□□ 2.56
CCM2-211ENST00000478582 PRKAR2AP13861 404 aaKnown RBP31.07■■■□□ 2.56
CCM2-211ENST00000478582 PDIA3P30101 505 aaKnown RBP31.07■■■□□ 2.56
CCM2-211ENST00000478582 METAP2P50579 478 aaKnown RBP eCLIP31.07■■■□□ 2.56
CCM2-211ENST00000478582 ANKRD1Q15327 319 aa31.07■■■□□ 2.56
CCM2-211ENST00000478582 MMP19Q99542 508 aa31.07■■■□□ 2.56
CCM2-211ENST00000478582 ACAD9Q9H845 621 aa31.07■■■□□ 2.56
CCM2-211ENST00000478582 RNF146Q9NTX7 359 aa31.07■■■□□ 2.56
CCM2-211ENST00000478582 ZNF236Q9UL36 1845 aa31.07■■■□□ 2.56
CCM2-211ENST00000478582 CCDC196A0A1B0GTZ2 297 aa31.06■■■□□ 2.56
CCM2-211ENST00000478582 ADORA2AP29274 412 aa31.06■■■□□ 2.56
CCM2-211ENST00000478582 NEK4P51957 841 aa31.06■■■□□ 2.56
CCM2-211ENST00000478582 CACNB2Q08289 660 aaPredicted RBP31.06■■■□□ 2.56
CCM2-211ENST00000478582 KCTD2Q14681 263 aa31.06■■■□□ 2.56
CCM2-211ENST00000478582 UBE2Q1Q7Z7E8 422 aa31.06■■■□□ 2.56
CCM2-211ENST00000478582 NPLOC4Q8TAT6 608 aa31.06■■■□□ 2.56
CCM2-211ENST00000478582 TBC1D32Q96NH3 1257 aa31.06■■■□□ 2.56
CCM2-211ENST00000478582 PIGSQ96S52 555 aa31.06■■■□□ 2.56
CCM2-211ENST00000478582 NAP1L2Q9ULW6 460 aaPredicted RBP31.06■■■□□ 2.56
CCM2-211ENST00000478582 CDC27P30260 824 aa31.05■■■□□ 2.56
CCM2-211ENST00000478582 DPP9Q86TI2 863 aa31.05■■■□□ 2.56
CCM2-211ENST00000478582 FBXO11Q86XK2 927 aa31.05■■■□□ 2.56
CCM2-211ENST00000478582 AMNQ9BXJ7 453 aa31.05■■■□□ 2.56
CCM2-211ENST00000478582 HOMER2Q9NSB8 354 aa31.05■■■□□ 2.56
CCM2-211ENST00000478582 FLRT1Q9NZU1 646 aa31.05■■■□□ 2.56
CCM2-211ENST00000478582 PNMA6FA0A0J9YX94 578 aa31.04■■■□□ 2.56
CCM2-211ENST00000478582 AK2P54819 239 aa31.04■■■□□ 2.56
CCM2-211ENST00000478582 FUT2Q10981 343 aa31.04■■■□□ 2.56
CCM2-211ENST00000478582 TRAF1Q13077 416 aa31.04■■■□□ 2.56
CCM2-211ENST00000478582 MFSD14CQ5VZR4 134 aa31.04■■■□□ 2.56
CCM2-211ENST00000478582 ABCB11O95342 1321 aa31.03■■■□□ 2.56
CCM2-211ENST00000478582 FARP2O94887 1054 aaPredicted RBP31.03■■■□□ 2.56
CCM2-211ENST00000478582 MUM1L1Q5H9M0 696 aa31.03■■■□□ 2.56
CCM2-211ENST00000478582 CMTR1Q8N1G2 835 aaKnown RBP31.03■■■□□ 2.56
CCM2-211ENST00000478582 IL27Q8NEV9 243 aa31.03■■■□□ 2.56
CCM2-211ENST00000478582 RRP36Q96EU6 259 aaKnown RBP31.03■■■□□ 2.56
CCM2-211ENST00000478582 MAF1Q9H063 256 aa31.03■■■□□ 2.56
CCM2-211ENST00000478582 SLC5A4Q9NY91 659 aa31.03■■■□□ 2.56
CCM2-211ENST00000478582 PPP1R11O60927 126 aaPredicted RBP31.02■■■□□ 2.56
CCM2-211ENST00000478582 COBLO75128 1261 aa31.02■■■□□ 2.56
CCM2-211ENST00000478582 ADD1P35611 737 aaKnown RBP31.02■■■□□ 2.56
CCM2-211ENST00000478582 HOMER1Q86YM7 354 aa31.02■■■□□ 2.56
CCM2-211ENST00000478582 CLEC4DQ8WXI8 215 aa31.02■■■□□ 2.56
CCM2-211ENST00000478582 DNAJC25-GNG10A0A024R161 153 aa31.01■■■□□ 2.55
CCM2-211ENST00000478582 TAL1P17542 331 aaPredicted RBP31.01■■■□□ 2.55
CCM2-211ENST00000478582 USH1GQ495M9 461 aa31.01■■■□□ 2.55
CCM2-211ENST00000478582 ANKRD35Q8N283 1001 aa31.01■■■□□ 2.55
CCM2-211ENST00000478582 LARP6Q9BRS8 491 aaKnown RBP31.01■■■□□ 2.55
CCM2-211ENST00000478582 DIS3Q9Y2L1 958 aaKnown RBP31.01■■■□□ 2.55
CCM2-211ENST00000478582 ZNFX1Q9P2E3 1918 aaKnown RBP31■■■□□ 2.55
CCM2-211ENST00000478582 IGHA2P01877 340 aa31■■■□□ 2.55
CCM2-211ENST00000478582 RGS22Q8NE09 1264 aa31■■■□□ 2.55
CCM2-211ENST00000478582 DDX11Q96FC9 970 aa31■■■□□ 2.55
CCM2-211ENST00000478582 A1CFQ9NQ94 594 aaKnown RBP31■■■□□ 2.55
CCM2-211ENST00000478582 TPCN1Q9ULQ1 816 aa31■■■□□ 2.55
CCM2-211ENST00000478582 MRPL11Q9Y3B7 192 aaKnown RBP31■■■□□ 2.55
CCM2-211ENST00000478582 PFASO15067 1338 aa30.99■■■□□ 2.55
CCM2-211ENST00000478582 CNTNAP5Q8WYK1 1306 aa30.99■■■□□ 2.55
CCM2-211ENST00000478582 CCND3P30281 292 aaPredicted RBP30.99■■■□□ 2.55
CCM2-211ENST00000478582 RABEP1Q15276 862 aa30.99■■■□□ 2.55
CCM2-211ENST00000478582 ZNF792Q3KQV3 632 aa30.99■■■□□ 2.55
CCM2-211ENST00000478582 OLFML2BQ68BL8 750 aa30.99■■■□□ 2.55
CCM2-211ENST00000478582 CCDC82Q8N4S0 544 aa30.99■■■□□ 2.55
CCM2-211ENST00000478582 ANKLE1Q8NAG6 615 aa30.99■■■□□ 2.55
CCM2-211ENST00000478582 SEC63Q9UGP8 760 aaKnown RBP30.99■■■□□ 2.55
CCM2-211ENST00000478582 PCDHA1Q9Y5I3 950 aa30.99■■■□□ 2.55
CCM2-211ENST00000478582 NFIBO00712 420 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms