RNA–Protein interactions for RNA: ENST00000478548.1

MEN1-215, Transcript of menin 1, human

TSL 2

Gene MEN1, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEN1-215	ENST00000478548	CCDC69	A6NI79	296 aa		27.82	■■■□□ 2.04
MEN1-215	ENST00000478548	NFIB	O00712	420 aa		27.82	■■■□□ 2.04
MEN1-215	ENST00000478548	NFXL1	Q6ZNB6	911 aa		27.82	■■■□□ 2.04
MEN1-215	ENST00000478548	CYP39A1	Q9NYL5	469 aa		27.82	■■■□□ 2.04
MEN1-215	ENST00000478548	PNMA2	Q9UL42	364 aa		27.82	■■■□□ 2.04
MEN1-215	ENST00000478548	BRPF3	Q9ULD4	1205 aa		27.82	■■■□□ 2.04
MEN1-215	ENST00000478548	BAZ2B	Q9UIF8	2168 aa	Known RBP	27.82	■■■□□ 2.04
MEN1-215	ENST00000478548	PPP1R11	O60927	126 aa	Predicted RBP	27.81	■■■□□ 2.04
MEN1-215	ENST00000478548	SEC24B	O95487	1268 aa		27.81	■■■□□ 2.04
MEN1-215	ENST00000478548	CYBA	P13498	195 aa		27.81	■■■□□ 2.04
MEN1-215	ENST00000478548	CNTN2	Q02246	1040 aa		27.81	■■■□□ 2.04
MEN1-215	ENST00000478548	TINF2	Q9BSI4	451 aa		27.81	■■■□□ 2.04
MEN1-215	ENST00000478548	CRISPLD2	Q9H0B8	497 aa		27.81	■■■□□ 2.04
MEN1-215	ENST00000478548	ASTN1	O14525	1302 aa		27.81	■■■□□ 2.04
MEN1-215	ENST00000478548	RXRA	P19793	462 aa		27.8	■■■□□ 2.04
MEN1-215	ENST00000478548	MAMDC4	Q6UXC1	1216 aa		27.8	■■■□□ 2.04
MEN1-215	ENST00000478548	ZNF467	Q7Z7K2	595 aa	Predicted RBP	27.8	■■■□□ 2.04
MEN1-215	ENST00000478548	FBXL16	Q8N461	479 aa		27.8	■■■□□ 2.04
MEN1-215	ENST00000478548	SLC12A7	Q9Y666	1083 aa		27.8	■■■□□ 2.04
MEN1-215	ENST00000478548	SOWAHB	A6NEL2	793 aa		27.79	■■■□□ 2.04
MEN1-215	ENST00000478548	RPS6KB1	P23443	525 aa		27.79	■■■□□ 2.04
MEN1-215	ENST00000478548	PRAMEF19	Q5SWL8	479 aa		27.79	■■■□□ 2.04
MEN1-215	ENST00000478548	LHX8	Q68G74	356 aa		27.79	■■■□□ 2.04
MEN1-215	ENST00000478548	APOA5	Q6Q788	366 aa		27.79	■■■□□ 2.04
MEN1-215	ENST00000478548	BLOC1S2	Q6QNY1	142 aa		27.79	■■■□□ 2.04
MEN1-215	ENST00000478548	RAB11FIP4	Q86YS3	637 aa		27.79	■■■□□ 2.04
MEN1-215	ENST00000478548	AGXT2	Q9BYV1	514 aa		27.79	■■■□□ 2.04
MEN1-215	ENST00000478548	ZSWIM6	Q9HCJ5	1215 aa		27.79	■■■□□ 2.04
MEN1-215	ENST00000478548	PFAS	O15067	1338 aa		27.79	■■■□□ 2.04
MEN1-215	ENST00000478548	DHX16	O60231	1041 aa	Known RBP	27.78	■■■□□ 2.04
MEN1-215	ENST00000478548	TFRC	P02786	760 aa	Known RBP	27.78	■■■□□ 2.04
MEN1-215	ENST00000478548	CALM1	P0DP23	149 aa		27.78	■■■□□ 2.04
MEN1-215	ENST00000478548	CALM2	P0DP24	149 aa		27.78	■■■□□ 2.04
MEN1-215	ENST00000478548	CALM3	P0DP25	149 aa		27.78	■■■□□ 2.04
MEN1-215	ENST00000478548	USH1G	Q495M9	461 aa		27.78	■■■□□ 2.04
MEN1-215	ENST00000478548	UBE2Q1	Q7Z7E8	422 aa		27.78	■■■□□ 2.04
MEN1-215	ENST00000478548	MSL3	Q8N5Y2	521 aa	Known RBP	27.78	■■■□□ 2.04
MEN1-215	ENST00000478548	CTCFL	Q8NI51	663 aa	Predicted RBP	27.78	■■■□□ 2.04
MEN1-215	ENST00000478548	PIGS	Q96S52	555 aa		27.78	■■■□□ 2.04
MEN1-215	ENST00000478548	ZBTB5	O15062	677 aa		27.77	■■■□□ 2.04
MEN1-215	ENST00000478548	PLEKHA8P1	O95397	391 aa		27.77	■■■□□ 2.04
MEN1-215	ENST00000478548	SNAI1	O95863	264 aa	Predicted RBP	27.77	■■■□□ 2.04
MEN1-215	ENST00000478548	CAST	P20810	708 aa	Known RBP	27.77	■■■□□ 2.04
MEN1-215	ENST00000478548	PSMA5	P28066	241 aa		27.77	■■■□□ 2.04
MEN1-215	ENST00000478548	SMARCA1	P28370	1054 aa		27.77	■■■□□ 2.04
MEN1-215	ENST00000478548	BAAT	Q14032	418 aa	Predicted RBP	27.77	■■■□□ 2.04
MEN1-215	ENST00000478548	NSMF	Q6X4W1	530 aa		27.77	■■■□□ 2.04
MEN1-215	ENST00000478548	SRBD1	Q8N5C6	995 aa	Known RBP	27.77	■■■□□ 2.04
MEN1-215	ENST00000478548	FANCB	Q8NB91	859 aa		27.77	■■■□□ 2.04
MEN1-215	ENST00000478548	PURB	Q96QR8	312 aa	Known RBP	27.77	■■■□□ 2.04
MEN1-215	ENST00000478548	MCM3AP	O60318	1980 aa		27.77	■■■□□ 2.04
MEN1-215	ENST00000478548	POTEB2	H3BUK9	544 aa		27.76	■■■□□ 2.03
MEN1-215	ENST00000478548	FARP2	O94887	1054 aa	Predicted RBP	27.76	■■■□□ 2.03
MEN1-215	ENST00000478548	KIF5B	P33176	963 aa		27.76	■■■□□ 2.03
MEN1-215	ENST00000478548	C8orf34	Q49A92	452 aa		27.76	■■■□□ 2.03
MEN1-215	ENST00000478548		Q6ZUG5	572 aa		27.76	■■■□□ 2.03
MEN1-215	ENST00000478548	FBXO11	Q86XK2	927 aa		27.76	■■■□□ 2.03
MEN1-215	ENST00000478548	CCDC144CP	Q8IYA2	1237 aa		27.76	■■■□□ 2.03
MEN1-215	ENST00000478548	SPZ1	Q9BXG8	430 aa		27.76	■■■□□ 2.03
MEN1-215	ENST00000478548	TM6SF1	Q9BZW5	370 aa		27.76	■■■□□ 2.03
MEN1-215	ENST00000478548	ABCB11	O95342	1321 aa		27.76	■■■□□ 2.03
MEN1-215	ENST00000478548	FRMPD3	Q5JV73	1810 aa		27.76	■■■□□ 2.03
MEN1-215	ENST00000478548	PDE4DIP	Q5VU43	2346 aa		27.76	■■■□□ 2.03
MEN1-215	ENST00000478548	OPLAH	O14841	1288 aa		27.75	■■■□□ 2.03
MEN1-215	ENST00000478548	SLC30A10	Q6XR72	485 aa		27.75	■■■□□ 2.03
MEN1-215	ENST00000478548	RUFY3	Q7L099	469 aa		27.75	■■■□□ 2.03
MEN1-215	ENST00000478548	CMTR1	Q8N1G2	835 aa	Known RBP	27.75	■■■□□ 2.03
MEN1-215	ENST00000478548	RGS22	Q8NE09	1264 aa		27.75	■■■□□ 2.03
MEN1-215	ENST00000478548	TBC1D5	Q92609	795 aa		27.75	■■■□□ 2.03
MEN1-215	ENST00000478548	AMN	Q9BXJ7	453 aa		27.75	■■■□□ 2.03
MEN1-215	ENST00000478548	SYNGAP1	Q96PV0	1343 aa		27.75	■■■□□ 2.03
MEN1-215	ENST00000478548	ZNF865	P0CJ78	1059 aa	Predicted RBP	27.74	■■■□□ 2.03
MEN1-215	ENST00000478548	MICU3	Q86XE3	530 aa		27.74	■■■□□ 2.03
MEN1-215	ENST00000478548	IL17RA	Q96F46	866 aa		27.74	■■■□□ 2.03
MEN1-215	ENST00000478548	LZTS2	Q9BRK4	669 aa		27.74	■■■□□ 2.03
MEN1-215	ENST00000478548	FAM217B	Q9NTX9	383 aa	Predicted RBP	27.74	■■■□□ 2.03
MEN1-215	ENST00000478548	NRBP1	Q9UHY1	535 aa		27.74	■■■□□ 2.03
MEN1-215	ENST00000478548	OGDHL	Q9ULD0	1010 aa		27.74	■■■□□ 2.03
MEN1-215	ENST00000478548	KLF18	A0A0U1RQI7	1052 aa		27.73	■■■□□ 2.03
MEN1-215	ENST00000478548	MNX1	P50219	401 aa	Predicted RBP	27.73	■■■□□ 2.03
MEN1-215	ENST00000478548	RPS6	P62753	249 aa	Known RBP	27.73	■■■□□ 2.03
MEN1-215	ENST00000478548	HOMER1	Q86YM7	354 aa		27.73	■■■□□ 2.03
MEN1-215	ENST00000478548	BRF1	Q92994	677 aa		27.73	■■■□□ 2.03
MEN1-215	ENST00000478548	PNMA6F	A0A0J9YX94	578 aa		27.72	■■■□□ 2.03
MEN1-215	ENST00000478548	GNAQ	P50148	359 aa		27.72	■■■□□ 2.03
MEN1-215	ENST00000478548	APOBR	Q0VD83	1088 aa		27.72	■■■□□ 2.03
MEN1-215	ENST00000478548	RNF207	Q6ZRF8	634 aa		27.72	■■■□□ 2.03
MEN1-215	ENST00000478548	TMTC3	Q6ZXV5	915 aa		27.72	■■■□□ 2.03
MEN1-215	ENST00000478548	MAF1	Q9H063	256 aa		27.72	■■■□□ 2.03
MEN1-215	ENST00000478548	KATNBL1	Q9H079	304 aa		27.72	■■■□□ 2.03
MEN1-215	ENST00000478548	DDX20	Q9UHI6	824 aa	Known RBP	27.72	■■■□□ 2.03
MEN1-215	ENST00000478548	DDX49	Q9Y6V7	483 aa	Known RBP	27.72	■■■□□ 2.03
MEN1-215	ENST00000478548	SEPT4	O43236	478 aa		27.71	■■■□□ 2.03
MEN1-215	ENST00000478548	ZBTB43	O43298	467 aa		27.71	■■■□□ 2.03
MEN1-215	ENST00000478548	CAPN2	P17655	700 aa		27.71	■■■□□ 2.03
MEN1-215	ENST00000478548	EVC	P57679	992 aa		27.71	■■■□□ 2.03
MEN1-215	ENST00000478548	GHRHR	Q02643	423 aa		27.71	■■■□□ 2.03
MEN1-215	ENST00000478548	TOB2	Q14106	344 aa	Predicted RBP	27.71	■■■□□ 2.03
MEN1-215	ENST00000478548	ARMCX2	Q7L311	632 aa		27.71	■■■□□ 2.03
MEN1-215	ENST00000478548	MORC4	Q8TE76	937 aa		27.71	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms