RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 NSMFQ6X4W1 530 aa16.17■□□□□ 0.18
RCC1-211ENST00000478232 LENG1Q96BZ8 264 aaPredicted RBP16.17■□□□□ 0.18
RCC1-211ENST00000478232 ZKSCAN3Q9BRR0 538 aa16.17■□□□□ 0.18
RCC1-211ENST00000478232 KATNBL1Q9H079 304 aa16.17■□□□□ 0.18
RCC1-211ENST00000478232 ADD3Q9UEY8 706 aaKnown RBP16.17■□□□□ 0.18
RCC1-211ENST00000478232 DNAH12Q6ZR08 3092 aa16.16■□□□□ 0.18
RCC1-211ENST00000478232 KDM4AO75164 1064 aa16.16■□□□□ 0.18
RCC1-211ENST00000478232 C6orf222P0C671 652 aaPredicted RBP16.16■□□□□ 0.18
RCC1-211ENST00000478232 NKX3-2P78367 333 aa16.16■□□□□ 0.18
RCC1-211ENST00000478232 TNFAIP2Q03169 654 aa16.16■□□□□ 0.18
RCC1-211ENST00000478232 TTC22Q5TAA0 569 aa16.16■□□□□ 0.18
RCC1-211ENST00000478232 IQSEC1Q6DN90 963 aa16.16■□□□□ 0.18
RCC1-211ENST00000478232 TOX2Q96NM4 488 aa16.16■□□□□ 0.18
RCC1-211ENST00000478232 KRT23Q9C075 422 aa16.16■□□□□ 0.18
RCC1-211ENST00000478232 UPF3AQ9H1J1 476 aaKnown RBP16.16■□□□□ 0.18
RCC1-211ENST00000478232 CNNM2Q9H8M5 875 aa16.16■□□□□ 0.18
RCC1-211ENST00000478232 PRDM5Q9NQX1 630 aaPredicted RBP16.16■□□□□ 0.18
RCC1-211ENST00000478232 STARD7Q9NQZ5 370 aa16.16■□□□□ 0.18
RCC1-211ENST00000478232 ZSWIM5Q9P217 1185 aa16.16■□□□□ 0.18
RCC1-211ENST00000478232 ELP1O95163 1332 aa16.16■□□□□ 0.18
RCC1-211ENST00000478232 NEDD4P46934 1319 aa16.16■□□□□ 0.18
RCC1-211ENST00000478232 LOC102724159A0A0B4J2E5 919 aa16.15■□□□□ 0.18
RCC1-211ENST00000478232 BAATQ14032 418 aaPredicted RBP16.15■□□□□ 0.18
RCC1-211ENST00000478232 PWP2Q15269 919 aaKnown RBP16.15■□□□□ 0.18
RCC1-211ENST00000478232 GNASQ5JWF2 1037 aa16.15■□□□□ 0.18
RCC1-211ENST00000478232 ANKRD33Q7Z3H0 272 aa16.15■□□□□ 0.18
RCC1-211ENST00000478232 RUFY2Q8WXA3 655 aa16.15■□□□□ 0.18
RCC1-211ENST00000478232 GLT1D1Q96MS3 346 aa16.15■□□□□ 0.18
RCC1-211ENST00000478232 ZSCAN10Q96SZ4 725 aaPredicted RBP16.15■□□□□ 0.18
RCC1-211ENST00000478232 KAT14Q9H8E8 782 aa16.15■□□□□ 0.18
RCC1-211ENST00000478232 PDLIM7Q9NR12 457 aa16.15■□□□□ 0.18
RCC1-211ENST00000478232 TRIM43BA6NCK2 446 aa16.14■□□□□ 0.17
RCC1-211ENST00000478232 DCDC2CA8MYV0 355 aa16.14■□□□□ 0.17
RCC1-211ENST00000478232 B4E1Z4 1266 aa16.14■□□□□ 0.17
RCC1-211ENST00000478232 ADCY6O43306 1168 aa16.14■□□□□ 0.17
RCC1-211ENST00000478232 ASGR1P07306 291 aa16.14■□□□□ 0.17
RCC1-211ENST00000478232 CLTBP09497 229 aa16.14■□□□□ 0.17
RCC1-211ENST00000478232 NOL8Q76FK4 1167 aaKnown RBP16.14■□□□□ 0.17
RCC1-211ENST00000478232 SH3RF1Q7Z6J0 888 aa16.14■□□□□ 0.17
RCC1-211ENST00000478232 PNMA1Q8ND90 353 aa16.14■□□□□ 0.17
RCC1-211ENST00000478232 MORC4Q8TE76 937 aa16.14■□□□□ 0.17
RCC1-211ENST00000478232 BADQ92934 168 aa16.14■□□□□ 0.17
RCC1-211ENST00000478232 VTI1AQ96AJ9 217 aa16.14■□□□□ 0.17
RCC1-211ENST00000478232 TRIM43Q96BQ3 446 aaPredicted RBP16.14■□□□□ 0.17
RCC1-211ENST00000478232 WDR19Q8NEZ3 1342 aa16.14■□□□□ 0.17
RCC1-211ENST00000478232 MYADML2A6NDP7 307 aa16.13■□□□□ 0.17
RCC1-211ENST00000478232 KIAA0355O15063 1070 aa16.13■□□□□ 0.17
RCC1-211ENST00000478232 PQBP1O60828 265 aaKnown RBP16.13■□□□□ 0.17
RCC1-211ENST00000478232 GSPT1P15170 499 aaKnown RBP16.13■□□□□ 0.17
RCC1-211ENST00000478232 IRX6P78412 446 aaPredicted RBP16.13■□□□□ 0.17
RCC1-211ENST00000478232 TAPT1Q6NXT6 567 aa16.13■□□□□ 0.17
RCC1-211ENST00000478232 CLEC4DQ8WXI8 215 aa16.13■□□□□ 0.17
RCC1-211ENST00000478232 AP5M1Q9H0R1 490 aa16.13■□□□□ 0.17
RCC1-211ENST00000478232 VTA1Q9NP79 307 aa16.13■□□□□ 0.17
RCC1-211ENST00000478232 TMEM39AQ9NV64 488 aa16.13■□□□□ 0.17
RCC1-211ENST00000478232 GNEQ9Y223 722 aaKnown RBP16.13■□□□□ 0.17
RCC1-211ENST00000478232 Q9Y3F1 56 aa16.13■□□□□ 0.17
RCC1-211ENST00000478232 ASTN1O14525 1302 aa16.13■□□□□ 0.17
RCC1-211ENST00000478232 PTPDC1A2A3K4 754 aa16.12■□□□□ 0.17
RCC1-211ENST00000478232 NFIBO00712 420 aa16.12■□□□□ 0.17
RCC1-211ENST00000478232 CTAGE5O15320 804 aa16.12■□□□□ 0.17
RCC1-211ENST00000478232 GOLGA8HP0CJ92 632 aa16.12■□□□□ 0.17
RCC1-211ENST00000478232 CDK7P50613 346 aa16.12■□□□□ 0.17
RCC1-211ENST00000478232 IRX5P78411 483 aaPredicted RBP16.12■□□□□ 0.17
RCC1-211ENST00000478232 FAAP100Q0VG06 881 aa16.12■□□□□ 0.17
RCC1-211ENST00000478232 RNF207Q6ZRF8 634 aa16.12■□□□□ 0.17
RCC1-211ENST00000478232 ENAHQ8N8S7 591 aaPredicted RBP16.12■□□□□ 0.17
RCC1-211ENST00000478232 RGS22Q8NE09 1264 aa16.12■□□□□ 0.17
RCC1-211ENST00000478232 PURBQ96QR8 312 aaKnown RBP16.12■□□□□ 0.17
RCC1-211ENST00000478232 UBAC1Q9BSL1 405 aa16.12■□□□□ 0.17
RCC1-211ENST00000478232 UBA5Q9GZZ9 404 aa16.12■□□□□ 0.17
RCC1-211ENST00000478232 MAF1Q9H063 256 aa16.12■□□□□ 0.17
RCC1-211ENST00000478232 MROH7Q68CQ1 1323 aa16.12■□□□□ 0.17
RCC1-211ENST00000478232 RAD50Q92878 1312 aa16.12■□□□□ 0.17
RCC1-211ENST00000478232 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.11■□□□□ 0.17
RCC1-211ENST00000478232 DYNC1LI2O43237 492 aaPredicted RBP16.11■□□□□ 0.17
RCC1-211ENST00000478232 CABYRO75952 493 aa16.11■□□□□ 0.17
RCC1-211ENST00000478232 RAG1P15918 1043 aa16.11■□□□□ 0.17
RCC1-211ENST00000478232 SMPD1P17405 629 aa16.11■□□□□ 0.17
RCC1-211ENST00000478232 CHMLP26374 656 aa16.11■□□□□ 0.17
RCC1-211ENST00000478232 ALDH5A1P51649 535 aaPredicted RBP16.11■□□□□ 0.17
RCC1-211ENST00000478232 SHHQ15465 462 aa16.11■□□□□ 0.17
RCC1-211ENST00000478232 ASPRV1Q53RT3 343 aa16.11■□□□□ 0.17
RCC1-211ENST00000478232 KIAA1211Q6ZU35 1233 aa16.11■□□□□ 0.17
RCC1-211ENST00000478232 EEPD1Q7L9B9 569 aa16.11■□□□□ 0.17
RCC1-211ENST00000478232 DEFB123Q8N688 67 aa16.11■□□□□ 0.17
RCC1-211ENST00000478232 MPHOSPH6Q99547 160 aaKnown RBP16.11■□□□□ 0.17
RCC1-211ENST00000478232 IL25Q9H293 177 aa16.11■□□□□ 0.17
RCC1-211ENST00000478232 PDGFCQ9NRA1 345 aa16.11■□□□□ 0.17
RCC1-211ENST00000478232 A0A0U1RQG5 324 aaPredicted RBP16.1■□□□□ 0.17
RCC1-211ENST00000478232 B4DLN1 442 aa16.1■□□□□ 0.17
RCC1-211ENST00000478232 ARVCFO00192 962 aa16.1■□□□□ 0.17
RCC1-211ENST00000478232 ZEB2O60315 1214 aa16.1■□□□□ 0.17
RCC1-211ENST00000478232 PARP1P09874 1014 aaKnown RBP16.1■□□□□ 0.17
RCC1-211ENST00000478232 CALML3P27482 149 aa16.1■□□□□ 0.17
RCC1-211ENST00000478232 MRPL12P52815 198 aaKnown RBP16.1■□□□□ 0.17
RCC1-211ENST00000478232 BEX3Q00994 111 aa16.1■□□□□ 0.17
RCC1-211ENST00000478232 TRDNQ13061 729 aa16.1■□□□□ 0.17
RCC1-211ENST00000478232 FSCN1Q16658 493 aaKnown RBP16.1■□□□□ 0.17
RCC1-211ENST00000478232 DNERQ8NFT8 737 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms