RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 REC8O95072 547 aa18.16■□□□□ 0.5
HMGA1-206ENST00000478214 SNAI1O95863 264 aaPredicted RBP18.16■□□□□ 0.5
HMGA1-206ENST00000478214 MNX1P50219 401 aaPredicted RBP18.16■□□□□ 0.5
HMGA1-206ENST00000478214 BAATQ14032 418 aaPredicted RBP18.16■□□□□ 0.5
HMGA1-206ENST00000478214 NFXL1Q6ZNB6 911 aa18.16■□□□□ 0.5
HMGA1-206ENST00000478214 ZNF654Q8IZM8 581 aa18.16■□□□□ 0.5
HMGA1-206ENST00000478214 MSL3Q8N5Y2 521 aaKnown RBP18.16■□□□□ 0.5
HMGA1-206ENST00000478214 ANKLE1Q8NAG6 615 aa18.16■□□□□ 0.5
HMGA1-206ENST00000478214 NUP133Q8WUM0 1156 aa18.16■□□□□ 0.5
HMGA1-206ENST00000478214 KCNB2Q92953 911 aa18.16■□□□□ 0.5
HMGA1-206ENST00000478214 PAWRQ96IZ0 340 aaKnown RBP18.16■□□□□ 0.5
HMGA1-206ENST00000478214 MYL10Q9BUA6 226 aa18.16■□□□□ 0.5
HMGA1-206ENST00000478214 NRBP1Q9UHY1 535 aa18.16■□□□□ 0.5
HMGA1-206ENST00000478214 CNPY2Q9Y2B0 182 aa18.16■□□□□ 0.5
HMGA1-206ENST00000478214 SYNGAP1Q96PV0 1343 aa18.16■□□□□ 0.5
HMGA1-206ENST00000478214 MSCO60682 206 aa18.15■□□□□ 0.5
HMGA1-206ENST00000478214 ZNF865P0CJ78 1059 aaPredicted RBP18.15■□□□□ 0.5
HMGA1-206ENST00000478214 HSPA4P34932 840 aa18.15■□□□□ 0.5
HMGA1-206ENST00000478214 LIFRP42702 1097 aa18.15■□□□□ 0.5
HMGA1-206ENST00000478214 EXOSC10Q01780 885 aaKnown RBP18.15■□□□□ 0.5
HMGA1-206ENST00000478214 KRT32Q14532 448 aa18.15■□□□□ 0.5
HMGA1-206ENST00000478214 TMTC2Q8N394 836 aa18.15■□□□□ 0.5
HMGA1-206ENST00000478214 TCEANC2Q96MN5 208 aa18.15■□□□□ 0.5
HMGA1-206ENST00000478214 PURBQ96QR8 312 aaKnown RBP18.15■□□□□ 0.5
HMGA1-206ENST00000478214 ASTN1O14525 1302 aa18.15■□□□□ 0.5
HMGA1-206ENST00000478214 SMCHD1A6NHR9 2005 aa18.15■□□□□ 0.5
HMGA1-206ENST00000478214 PTPDC1A2A3K4 754 aa18.14■□□□□ 0.49
HMGA1-206ENST00000478214 CCDC69A6NI79 296 aa18.14■□□□□ 0.49
HMGA1-206ENST00000478214 DDAH1O94760 285 aa18.14■□□□□ 0.49
HMGA1-206ENST00000478214 SLC30A10Q6XR72 485 aa18.14■□□□□ 0.49
HMGA1-206ENST00000478214 ARMCX2Q7L311 632 aa18.14■□□□□ 0.49
HMGA1-206ENST00000478214 DHX32Q7L7V1 743 aaKnown RBP18.14■□□□□ 0.49
HMGA1-206ENST00000478214 FBXO11Q86XK2 927 aa18.14■□□□□ 0.49
HMGA1-206ENST00000478214 CCDC144CPQ8IYA2 1237 aa18.14■□□□□ 0.49
HMGA1-206ENST00000478214 MTMR8Q96EF0 704 aa18.14■□□□□ 0.49
HMGA1-206ENST00000478214 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.14■□□□□ 0.49
HMGA1-206ENST00000478214 SNX14Q9Y5W7 946 aa18.14■□□□□ 0.49
HMGA1-206ENST00000478214 PLXNA1Q9UIW2 1896 aa18.14■□□□□ 0.49
HMGA1-206ENST00000478214 CYTH3O43739 400 aa18.13■□□□□ 0.49
HMGA1-206ENST00000478214 NECAB2Q7Z6G3 386 aa18.13■□□□□ 0.49
HMGA1-206ENST00000478214 RAB11FIP4Q86YS3 637 aa18.13■□□□□ 0.49
HMGA1-206ENST00000478214 MAP3K14Q99558 947 aa18.13■□□□□ 0.49
HMGA1-206ENST00000478214 RIOX1Q9H6W3 641 aa18.13■□□□□ 0.49
HMGA1-206ENST00000478214 ZHX1Q9UKY1 873 aaPredicted RBP18.13■□□□□ 0.49
HMGA1-206ENST00000478214 DDX49Q9Y6V7 483 aaKnown RBP18.13■□□□□ 0.49
HMGA1-206ENST00000478214 ZBTB5O15062 677 aa18.12■□□□□ 0.49
HMGA1-206ENST00000478214 PPP1R11O60927 126 aaPredicted RBP18.12■□□□□ 0.49
HMGA1-206ENST00000478214 CPA1P15085 419 aa18.12■□□□□ 0.49
HMGA1-206ENST00000478214 RXRAP19793 462 aa18.12■□□□□ 0.49
HMGA1-206ENST00000478214 CALML3P27482 149 aa18.12■□□□□ 0.49
HMGA1-206ENST00000478214 RPS6P62753 249 aaKnown RBP18.12■□□□□ 0.49
HMGA1-206ENST00000478214 ACVR2BQ13705 512 aa18.12■□□□□ 0.49
HMGA1-206ENST00000478214 RNF207Q6ZRF8 634 aa18.12■□□□□ 0.49
HMGA1-206ENST00000478214 HOMER1Q86YM7 354 aa18.12■□□□□ 0.49
HMGA1-206ENST00000478214 CTCFLQ8NI51 663 aaPredicted RBP18.12■□□□□ 0.49
HMGA1-206ENST00000478214 TBC1D5Q92609 795 aa18.12■□□□□ 0.49
HMGA1-206ENST00000478214 LENG1Q96BZ8 264 aaPredicted RBP18.12■□□□□ 0.49
HMGA1-206ENST00000478214 JAKMIP1Q96N16 626 aaKnown RBP18.12■□□□□ 0.49
HMGA1-206ENST00000478214 PIGSQ96S52 555 aa18.12■□□□□ 0.49
HMGA1-206ENST00000478214 ABCB11O95342 1321 aa18.12■□□□□ 0.49
HMGA1-206ENST00000478214 ASB14A6NK59 587 aa18.11■□□□□ 0.49
HMGA1-206ENST00000478214 AKR1A1P14550 325 aa18.11■□□□□ 0.49
HMGA1-206ENST00000478214 KIF5BP33176 963 aa18.11■□□□□ 0.49
HMGA1-206ENST00000478214 SGMS1Q86VZ5 419 aa18.11■□□□□ 0.49
HMGA1-206ENST00000478214 HTATIP2Q9BUP3 242 aa18.11■□□□□ 0.49
HMGA1-206ENST00000478214 AMNQ9BXJ7 453 aa18.11■□□□□ 0.49
HMGA1-206ENST00000478214 USP26Q9BXU7 913 aa18.11■□□□□ 0.49
HMGA1-206ENST00000478214 KATNBL1Q9H079 304 aa18.11■□□□□ 0.49
HMGA1-206ENST00000478214 ABHD16BQ9H3Z7 469 aa18.11■□□□□ 0.49
HMGA1-206ENST00000478214 C11orf49Q9H6J7 331 aa18.11■□□□□ 0.49
HMGA1-206ENST00000478214 MRPL11Q9Y3B7 192 aaKnown RBP18.11■□□□□ 0.49
HMGA1-206ENST00000478214 SLC12A7Q9Y666 1083 aa18.11■□□□□ 0.49
HMGA1-206ENST00000478214 PLEKHA8P1O95397 391 aa18.1■□□□□ 0.49
HMGA1-206ENST00000478214 HMGB1P09429 215 aaKnown RBP18.1■□□□□ 0.49
HMGA1-206ENST00000478214 RARBP10826 455 aa18.1■□□□□ 0.49
HMGA1-206ENST00000478214 GJC2Q5T442 439 aaPredicted RBP18.1■□□□□ 0.49
HMGA1-206ENST00000478214 RGS22Q8NE09 1264 aa18.1■□□□□ 0.49
HMGA1-206ENST00000478214 PIBF1Q8WXW3 757 aa18.1■□□□□ 0.49
HMGA1-206ENST00000478214 DPF3Q92784 378 aa18.1■□□□□ 0.49
HMGA1-206ENST00000478214 ADD3Q9UEY8 706 aaKnown RBP18.1■□□□□ 0.49
HMGA1-206ENST00000478214 FAM184BQ9ULE4 1060 aa18.1■□□□□ 0.49
HMGA1-206ENST00000478214 EPB41L2O43491 1005 aaKnown RBP18.09■□□□□ 0.49
HMGA1-206ENST00000478214 MYCNP04198 464 aaPredicted RBP18.09■□□□□ 0.49
HMGA1-206ENST00000478214 CALM1P0DP23 149 aa18.09■□□□□ 0.49
HMGA1-206ENST00000478214 CALM2P0DP24 149 aa18.09■□□□□ 0.49
HMGA1-206ENST00000478214 CALM3P0DP25 149 aa18.09■□□□□ 0.49
HMGA1-206ENST00000478214 COL6A1P12109 1028 aa18.09■□□□□ 0.49
HMGA1-206ENST00000478214 ALDH5A1P51649 535 aaPredicted RBP18.09■□□□□ 0.49
HMGA1-206ENST00000478214 MICU3Q86XE3 530 aa18.09■□□□□ 0.49
HMGA1-206ENST00000478214 SRBD1Q8N5C6 995 aaKnown RBP18.09■□□□□ 0.49
HMGA1-206ENST00000478214 ARRDC4Q8NCT1 418 aa18.09■□□□□ 0.49
HMGA1-206ENST00000478214 SPZ1Q9BXG8 430 aa18.09■□□□□ 0.49
HMGA1-206ENST00000478214 XPNPEP3Q9NQH7 507 aa18.09■□□□□ 0.49
HMGA1-206ENST00000478214 BRPF3Q9ULD4 1205 aa18.09■□□□□ 0.49
HMGA1-206ENST00000478214 PCDHA1Q9Y5I3 950 aa18.09■□□□□ 0.49
HMGA1-206ENST00000478214 PNMA6FA0A0J9YX94 578 aa18.08■□□□□ 0.48
HMGA1-206ENST00000478214 DNM1LO00429 736 aa18.08■□□□□ 0.48
HMGA1-206ENST00000478214 OPLAHO14841 1288 aa18.08■□□□□ 0.48
HMGA1-206ENST00000478214 ADCY6O43306 1168 aa18.08■□□□□ 0.48
HMGA1-206ENST00000478214 GNAQP50148 359 aa18.08■□□□□ 0.48
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