RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 CYP2C18P33260 490 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 SLC1A4P43007 532 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 BEX3Q00994 111 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 NOL8Q76FK4 1167 aaKnown RBP11.48□□□□□ -0.57
CCM2-210ENST00000478169 TLK2Q86UE8 772 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 STAG1Q8WVM7 1258 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 GMCL1Q96IK5 515 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 HIPK3Q9H422 1215 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 PRDM12Q9H4Q4 367 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 A1CFQ9NQ94 594 aaKnown RBP11.48□□□□□ -0.57
CCM2-210ENST00000478169 RNF146Q9NTX7 359 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 Q9Y3F1 56 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 ASTN1O14525 1302 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 LRRC37A2A6NM11 1700 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 LCTP09848 1927 aa11.47□□□□□ -0.57
CCM2-210ENST00000478169 ZNF536O15090 1300 aa11.47□□□□□ -0.57
CCM2-210ENST00000478169 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.47□□□□□ -0.57
CCM2-210ENST00000478169 SOWAHBA6NEL2 793 aa11.47□□□□□ -0.57
CCM2-210ENST00000478169 M0R2C6 588 aa11.47□□□□□ -0.57
CCM2-210ENST00000478169 TFAP4Q01664 338 aa11.47□□□□□ -0.57
CCM2-210ENST00000478169 ITGA7Q13683 1181 aa11.47□□□□□ -0.57
CCM2-210ENST00000478169 FSCN1Q16658 493 aaKnown RBP11.47□□□□□ -0.57
CCM2-210ENST00000478169 IQSEC1Q6DN90 963 aa11.47□□□□□ -0.57
CCM2-210ENST00000478169 CXCL17Q6UXB2 119 aa11.47□□□□□ -0.57
CCM2-210ENST00000478169 AGBL1Q96MI9 1066 aa11.47□□□□□ -0.57
CCM2-210ENST00000478169 TRERF1Q96PN7 1200 aa11.47□□□□□ -0.57
CCM2-210ENST00000478169 AP5M1Q9H0R1 490 aa11.47□□□□□ -0.57
CCM2-210ENST00000478169 DCTPP1Q9H773 170 aa11.47□□□□□ -0.57
CCM2-210ENST00000478169 THEGQ9P2T0 379 aa11.47□□□□□ -0.57
CCM2-210ENST00000478169 SMPD1P17405 629 aa11.46□□□□□ -0.57
CCM2-210ENST00000478169 MCCP23508 829 aa11.46□□□□□ -0.57
CCM2-210ENST00000478169 PPARAQ07869 468 aa11.46□□□□□ -0.57
CCM2-210ENST00000478169 IKQ13123 557 aaPredicted RBP11.46□□□□□ -0.57
CCM2-210ENST00000478169 RCSD1Q6JBY9 416 aa11.46□□□□□ -0.57
CCM2-210ENST00000478169 RPUSD2Q8IZ73 545 aaKnown RBP11.46□□□□□ -0.57
CCM2-210ENST00000478169 PPM1EQ8WY54 764 aa11.46□□□□□ -0.57
CCM2-210ENST00000478169 ASB2Q96Q27 587 aa11.46□□□□□ -0.57
CCM2-210ENST00000478169 NOC4LQ9BVI4 516 aaKnown RBP11.46□□□□□ -0.57
CCM2-210ENST00000478169 SLC28A3Q9HAS3 691 aa11.46□□□□□ -0.57
CCM2-210ENST00000478169 CXXC1Q9P0U4 656 aaPredicted RBP11.46□□□□□ -0.57
CCM2-210ENST00000478169 RCAN3Q9UKA8 241 aa11.46□□□□□ -0.57
CCM2-210ENST00000478169 ISY1Q9ULR0 285 aaKnown RBP11.46□□□□□ -0.57
CCM2-210ENST00000478169 TCF20Q9UGU0 1960 aaKnown RBP11.46□□□□□ -0.58
CCM2-210ENST00000478169 CHD7Q9P2D1 2997 aa11.45□□□□□ -0.58
CCM2-210ENST00000478169 GRIN2DO15399 1336 aa11.45□□□□□ -0.58
CCM2-210ENST00000478169 TTC41PQ6P2S7 1318 aa11.45□□□□□ -0.58
CCM2-210ENST00000478169 DYNC1LI2O43237 492 aaPredicted RBP11.45□□□□□ -0.58
CCM2-210ENST00000478169 ALAS1P13196 640 aa11.45□□□□□ -0.58
CCM2-210ENST00000478169 MRPS5P82675 430 aaKnown RBP11.45□□□□□ -0.58
CCM2-210ENST00000478169 ADGRE1Q14246 886 aa11.45□□□□□ -0.58
CCM2-210ENST00000478169 TAPT1Q6NXT6 567 aa11.45□□□□□ -0.58
CCM2-210ENST00000478169 NAPBQ9H115 298 aa11.45□□□□□ -0.58
CCM2-210ENST00000478169 NKX2-4Q9H2Z4 354 aa11.45□□□□□ -0.58
CCM2-210ENST00000478169 VTA1Q9NP79 307 aa11.45□□□□□ -0.58
CCM2-210ENST00000478169 CYP39A1Q9NYL5 469 aa11.45□□□□□ -0.58
CCM2-210ENST00000478169 MUC3AQ02505 3323 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 UMODL1Q5DID0 1318 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 SCN5AQ14524 2016 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 LOC102724159A0A0B4J2E5 919 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 ERC2O15083 957 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 B4GALT4O60513 344 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 IGFBP4P22692 258 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 PWP2Q15269 919 aaKnown RBP11.44□□□□□ -0.58
CCM2-210ENST00000478169 TSHZ3Q63HK5 1081 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 OTOP2Q7RTS6 562 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 MORC4Q8TE76 937 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 TRPV6Q9H1D0 765 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 PDGFCQ9NRA1 345 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 PRR12Q9ULL5 1215 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 STX8Q9UNK0 236 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 YBX2Q9Y2T7 364 aaKnown RBP11.44□□□□□ -0.58
CCM2-210ENST00000478169 PCDHA11Q9Y5I1 949 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 SLC4A7Q9Y6M7 1214 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 TRIP12Q14669 1992 aaPredicted RBP11.44□□□□□ -0.58
CCM2-210ENST00000478169 SCN10AQ9Y5Y9 1956 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 BDP1A6H8Y1 2624 aa11.44□□□□□ -0.58
CCM2-210ENST00000478169 PRRC2BQ5JSZ5 2229 aaKnown RBP11.44□□□□□ -0.58
CCM2-210ENST00000478169 TSPY2A6NKD2 308 aa11.43□□□□□ -0.58
CCM2-210ENST00000478169 PFKMP08237 780 aa11.43□□□□□ -0.58
CCM2-210ENST00000478169 SUPT20HL2P0C7V6 817 aa11.43□□□□□ -0.58
CCM2-210ENST00000478169 COL9A1P20849 921 aa11.43□□□□□ -0.58
CCM2-210ENST00000478169 CCL23P55773 120 aa11.43□□□□□ -0.58
CCM2-210ENST00000478169 CCDC85BQ15834 202 aaPredicted RBP11.43□□□□□ -0.58
CCM2-210ENST00000478169 DUSP28Q4G0W2 176 aa11.43□□□□□ -0.58
CCM2-210ENST00000478169 MUM1L1Q5H9M0 696 aa11.43□□□□□ -0.58
CCM2-210ENST00000478169 ZMYM1Q5SVZ6 1142 aa11.43□□□□□ -0.58
CCM2-210ENST00000478169 C20orf194Q5TEA3 1177 aa11.43□□□□□ -0.58
CCM2-210ENST00000478169 NSMFQ6X4W1 530 aa11.43□□□□□ -0.58
CCM2-210ENST00000478169 KIAA1211Q6ZU35 1233 aa11.43□□□□□ -0.58
CCM2-210ENST00000478169 KCTD1Q719H9 257 aa11.43□□□□□ -0.58
CCM2-210ENST00000478169 EEPD1Q7L9B9 569 aa11.43□□□□□ -0.58
CCM2-210ENST00000478169 FBXO16Q8IX29 292 aaPredicted RBP11.43□□□□□ -0.58
CCM2-210ENST00000478169 ADAMTS19Q8TE59 1207 aa11.43□□□□□ -0.58
CCM2-210ENST00000478169 SEC62Q99442 399 aaKnown RBP11.43□□□□□ -0.58
CCM2-210ENST00000478169 WNT8AQ9H1J5 351 aa11.43□□□□□ -0.58
CCM2-210ENST00000478169 ALDH8A1Q9H2A2 487 aaPredicted RBP11.43□□□□□ -0.58
CCM2-210ENST00000478169 TSPYL2Q9H2G4 693 aaPredicted RBP11.43□□□□□ -0.58
CCM2-210ENST00000478169 IL17RBQ9NRM6 502 aa11.43□□□□□ -0.58
CCM2-210ENST00000478169 ADD3Q9UEY8 706 aaKnown RBP11.43□□□□□ -0.58
CCM2-210ENST00000478169 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms