RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 MUTYHQ9UIF7 546 aa8.89□□□□□ -0.99
SPTLC1-205ENST00000477888 MTUS1Q9ULD2 1270 aa8.89□□□□□ -0.99
SPTLC1-205ENST00000477888 PTPRZ1P23471 2315 aaPredicted RBP8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 LINC01553A4QN01 128 aa8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 PITPNM1O00562 1244 aa8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 WDR5P61964 334 aaKnown RBP8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 G3BP1Q13283 466 aaKnown RBP eCLIP8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 TNNI3KQ59H18 835 aa8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 FAM83BQ5T0W9 1011 aa8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 TMEM63BQ5T3F8 832 aa8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 TMED8Q6PL24 325 aaPredicted RBP8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 ANKRD35Q8N283 1001 aa8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 PBXIP1Q96AQ6 731 aa8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 DYNLL2Q96FJ2 89 aa8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 RAD9AQ99638 391 aa8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 FTOQ9C0B1 505 aaKnown RBP eCLIP8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 AP5M1Q9H0R1 490 aa8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 SWAP70Q9UH65 585 aa8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 FPGT-TNNI3KV9GXZ4 949 aa8.88□□□□□ -0.99
SPTLC1-205ENST00000477888 GJB5O95377 273 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 CYP2D6P10635 497 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 CNTN2Q02246 1040 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 ALDH1L2Q3SY69 923 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 IQSEC1Q6DN90 963 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 TAPT1Q6NXT6 567 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 RNF135Q8IUD6 432 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 FAM133AQ8N9E0 248 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 RETREG2Q8NC44 543 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 PABPC5Q96DU9 382 aaKnown RBP8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 MRPL38Q96DV4 380 aaKnown RBP8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 CCDC17Q96LX7 622 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 SLF1Q9BQI6 1058 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 ZBED2Q9BTP6 218 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 ANTXR1Q9H6X2 564 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 KANSL2Q9H9L4 492 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 DCP1AQ9NPI6 582 aaPredicted RBP8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 PDGFCQ9NRA1 345 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 FAM86C1Q9NVL1 165 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 FAM50BQ9Y247 325 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 SPTBN4Q9H254 2564 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 MYO15AQ9UKN7 3530 aa8.87□□□□□ -0.99
SPTLC1-205ENST00000477888 MAGEB6P1A0A0J9YX57 407 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 PNMA6EA0A0J9YXQ4 647 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 SOWAHBA6NEL2 793 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 TMEM221A6NGB7 291 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 PROB1E7EW31 1015 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 M0R296 226 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 LTBRP36941 435 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 KCNJ6P48051 423 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 DEFB103AP81534 67 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 PURAQ00577 322 aaKnown RBP8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 SMAD2Q15796 467 aaKnown RBP8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 TRIM67Q6ZTA4 783 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 CPXCR1Q8N123 301 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 PRPF38AQ8NAV1 312 aaKnown RBP8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 CHST13Q8NET6 341 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 NUP88Q99567 741 aaPredicted RBP8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 SLC38A10Q9HBR0 1119 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 RAVER2Q9HCJ3 691 aaKnown RBP8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 GOPCQ9HD26 462 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 FBXO40Q9UH90 709 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 CTNNA3Q9UI47 895 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 CIZ1Q9ULV3 898 aaPredicted RBP8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 CACNA1HO95180 2353 aa8.86□□□□□ -0.99
SPTLC1-205ENST00000477888 TECTAO75443 2155 aa8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 FOCADQ5VW36 1801 aa8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 ASB14A6NK59 587 aa8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 GNAI3P08754 354 aa8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 SLC4A3P48751 1232 aa8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 BFSP2Q13515 415 aa8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 NBPF20Q3BBV1 942 aa8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 NFRKBQ6P4R8 1299 aa8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 MIER1Q8N108 512 aa8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 BANK1Q8NDB2 785 aa8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 SDR42E1Q8WUS8 393 aa8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 C17orf80Q9BSJ5 609 aa8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 CRNKL1Q9BZJ0 848 aaKnown RBP8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 DBNLQ9UJU6 430 aaKnown RBP8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 NOB1Q9ULX3 412 aaKnown RBP8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 DDX49Q9Y6V7 483 aaKnown RBP8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 ZNFX1Q9P2E3 1918 aaKnown RBP8.85□□□□□ -0.99
SPTLC1-205ENST00000477888 ABHD14A-ACY1A0A1B0GW23 586 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 USP17L12C9JPN9 530 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 USP17L21D6R901 530 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 RAD21O60216 631 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 ZBED4O75132 1171 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 CDK8P49336 464 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 OAZ1P54368 228 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 PTPROQ16827 1216 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 TCTN1Q2MV58 587 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 CTC1Q2NKJ3 1217 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 LRRFIP1Q32MZ4 808 aaKnown RBP8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 DUSP28Q4G0W2 176 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 TIGD5Q53EQ6 642 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 TCEAL5Q5H9L2 206 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 ASCL5Q7RTU5 278 aa8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 SUGP1Q8IWZ8 645 aaKnown RBP8.84□□□□□ -0.99
SPTLC1-205ENST00000477888 FBXL6Q8N531 539 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms