RNA–Protein interactions for RNA: ENST00000477772.1

COL11A2-206, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 2

Gene COL11A2, Length 1,984 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-206ENST00000477772 FBXO28Q9NVF7 368 aa18.53■□□□□ 0.56
COL11A2-206ENST00000477772 PCDHA7Q9UN72 937 aa18.53■□□□□ 0.56
COL11A2-206ENST00000477772 PALM3A6NDB9 673 aaPredicted RBP18.53■□□□□ 0.56
COL11A2-206ENST00000477772 TM4SF4P48230 202 aa18.53■□□□□ 0.56
COL11A2-206ENST00000477772 STK38Q15208 465 aa18.53■□□□□ 0.56
COL11A2-206ENST00000477772 CCDC96Q2M329 555 aa18.53■□□□□ 0.56
COL11A2-206ENST00000477772 MYSM1Q5VVJ2 828 aa18.53■□□□□ 0.56
COL11A2-206ENST00000477772 FMR1NBQ8N0W7 255 aaPredicted RBP18.53■□□□□ 0.56
COL11A2-206ENST00000477772 FANCBQ8NB91 859 aa18.53■□□□□ 0.56
COL11A2-206ENST00000477772 SPC24Q8NBT2 197 aa18.53■□□□□ 0.56
COL11A2-206ENST00000477772 MAP7D2Q96T17 732 aa18.53■□□□□ 0.56
COL11A2-206ENST00000477772 MAP3K14Q99558 947 aa18.53■□□□□ 0.56
COL11A2-206ENST00000477772 GPCPD1Q9NPB8 672 aa18.53■□□□□ 0.56
COL11A2-206ENST00000477772 THSD7BQ9C0I4 1608 aa18.52■□□□□ 0.56
COL11A2-206ENST00000477772 PARP1P09874 1014 aaKnown RBP18.52■□□□□ 0.56
COL11A2-206ENST00000477772 HOXA7P31268 230 aaPredicted RBP18.52■□□□□ 0.56
COL11A2-206ENST00000477772 INHBEP58166 350 aa18.52■□□□□ 0.56
COL11A2-206ENST00000477772 SF3A1Q15459 793 aaKnown RBP18.52■□□□□ 0.56
COL11A2-206ENST00000477772 SYNE3Q6ZMZ3 975 aa18.52■□□□□ 0.56
COL11A2-206ENST00000477772 CATSPERGQ6ZRH7 1159 aa18.52■□□□□ 0.56
COL11A2-206ENST00000477772 MYRIPQ8NFW9 859 aa18.52■□□□□ 0.56
COL11A2-206ENST00000477772 TANGO6Q9C0B7 1094 aa18.52■□□□□ 0.56
COL11A2-206ENST00000477772 CPVLQ9H3G5 476 aa18.52■□□□□ 0.56
COL11A2-206ENST00000477772 BAZ2BQ9UIF8 2168 aaKnown RBP18.52■□□□□ 0.55
COL11A2-206ENST00000477772 TMEM232C9JQI7 657 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 CALM1P0DP23 149 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 CALM2P0DP24 149 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 CALM3P0DP25 149 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 CDC27P30260 824 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 METAP2P50579 478 aaKnown RBP eCLIP18.51■□□□□ 0.55
COL11A2-206ENST00000477772 ANKRD23Q86SG2 305 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 IFNL1Q8IU54 200 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 NAT10Q9H0A0 1025 aaKnown RBP18.51■□□□□ 0.55
COL11A2-206ENST00000477772 NID2Q14112 1375 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 USP17L15C9J2P7 530 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 USP17L13C9JLJ4 530 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 USP17L11C9JVI0 530 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 USP17L18D6R9N7 530 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 USP17L22D6RA61 530 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 USP17L17D6RBQ6 530 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 USP17L19D6RCP7 530 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 USP17L20D6RJB6 530 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 PDHXO00330 501 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 SPTLC2O15270 562 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 SLC16A2P36021 539 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 MAP2K2P36507 400 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 RCAN1P53805 252 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 USP17L24Q0WX57 530 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 SLC35G1Q2M3R5 365 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 ASPRV1Q53RT3 343 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 NBPF11Q86T75 865 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 DNAJC5GQ8N7S2 189 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 MRFAP1L1Q96HT8 127 aa18.51■□□□□ 0.55
COL11A2-206ENST00000477772 GOLGA8AA7E2F4 631 aa18.5■□□□□ 0.55
COL11A2-206ENST00000477772 SREBF2Q12772 1141 aa18.5■□□□□ 0.55
COL11A2-206ENST00000477772 GPATCH4Q5T3I0 446 aaKnown RBP18.5■□□□□ 0.55
COL11A2-206ENST00000477772 MTERF4Q7Z6M4 381 aaKnown RBP18.5■□□□□ 0.55
COL11A2-206ENST00000477772 CEP57L1Q8IYX8 460 aa18.5■□□□□ 0.55
COL11A2-206ENST00000477772 CMTR1Q8N1G2 835 aaKnown RBP18.5■□□□□ 0.55
COL11A2-206ENST00000477772 CTCFLQ8NI51 663 aaPredicted RBP18.5■□□□□ 0.55
COL11A2-206ENST00000477772 ASCC2Q9H1I8 757 aaPredicted RBP18.5■□□□□ 0.55
COL11A2-206ENST00000477772 KLRF2D3W0D1 207 aa18.5■□□□□ 0.55
COL11A2-206ENST00000477772 FLOT1O75955 427 aa18.5■□□□□ 0.55
COL11A2-206ENST00000477772 PLEKHA8P1O95397 391 aa18.5■□□□□ 0.55
COL11A2-206ENST00000477772 PTGS1P23219 599 aa18.5■□□□□ 0.55
COL11A2-206ENST00000477772 RTN1Q16799 776 aa18.5■□□□□ 0.55
COL11A2-206ENST00000477772 POTEEQ6S8J3 1075 aa18.5■□□□□ 0.55
COL11A2-206ENST00000477772 BTNL9Q6UXG8 535 aa18.5■□□□□ 0.55
COL11A2-206ENST00000477772 DRC7Q8IY82 874 aa18.5■□□□□ 0.55
COL11A2-206ENST00000477772 UBA5Q9GZZ9 404 aa18.5■□□□□ 0.55
COL11A2-206ENST00000477772 PDCL3Q9H2J4 239 aa18.5■□□□□ 0.55
COL11A2-206ENST00000477772 PYCARDQ9ULZ3 195 aa18.5■□□□□ 0.55
COL11A2-206ENST00000477772 SLC45A1Q9Y2W3 748 aa18.5■□□□□ 0.55
COL11A2-206ENST00000477772 CYP2C8P10632 490 aa18.49■□□□□ 0.55
COL11A2-206ENST00000477772 STAT2P52630 851 aa18.49■□□□□ 0.55
COL11A2-206ENST00000477772 ANO1Q5XXA6 986 aa18.49■□□□□ 0.55
COL11A2-206ENST00000477772 C11orf57Q6ZUT1 292 aaPredicted RBP18.49■□□□□ 0.55
COL11A2-206ENST00000477772 P2RX7Q99572 595 aaKnown RBP18.49■□□□□ 0.55
COL11A2-206ENST00000477772 FEM1BQ9UK73 627 aa18.49■□□□□ 0.55
COL11A2-206ENST00000477772 CLIC4Q9Y696 253 aa18.49■□□□□ 0.55
COL11A2-206ENST00000477772 STK36Q9NRP7 1315 aa18.49■□□□□ 0.55
COL11A2-206ENST00000477772 BECN2A8MW95 431 aa18.48■□□□□ 0.55
COL11A2-206ENST00000477772 CYTH3O43739 400 aa18.48■□□□□ 0.55
COL11A2-206ENST00000477772 NEMFO60524 1076 aa18.48■□□□□ 0.55
COL11A2-206ENST00000477772 PLA2G6O60733 806 aa18.48■□□□□ 0.55
COL11A2-206ENST00000477772 KIF5BP33176 963 aa18.48■□□□□ 0.55
COL11A2-206ENST00000477772 GTF2F1P35269 517 aaKnown RBP eCLIP18.48■□□□□ 0.55
COL11A2-206ENST00000477772 COG2Q14746 738 aa18.48■□□□□ 0.55
COL11A2-206ENST00000477772 OTUD7BQ6GQQ9 843 aa18.48■□□□□ 0.55
COL11A2-206ENST00000477772 CCDC186Q7Z3E2 898 aa18.48■□□□□ 0.55
COL11A2-206ENST00000477772 SRBD1Q8N5C6 995 aaKnown RBP18.48■□□□□ 0.55
COL11A2-206ENST00000477772 ALG1Q9BT22 464 aa18.48■□□□□ 0.55
COL11A2-206ENST00000477772 PPFIA3O75145 1194 aa18.48■□□□□ 0.55
COL11A2-206ENST00000477772 CMA1P23946 247 aa18.48■□□□□ 0.55
COL11A2-206ENST00000477772 FUT2Q10981 343 aa18.48■□□□□ 0.55
COL11A2-206ENST00000477772 PABPC4Q13310 644 aaKnown RBP eCLIP18.48■□□□□ 0.55
COL11A2-206ENST00000477772 SAMD1Q6SPF0 538 aaPredicted RBP18.48■□□□□ 0.55
COL11A2-206ENST00000477772 TMTC3Q6ZXV5 915 aa18.48■□□□□ 0.55
COL11A2-206ENST00000477772 KIFC2Q96AC6 838 aa18.48■□□□□ 0.55
COL11A2-206ENST00000477772 SLF1Q9BQI6 1058 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms