RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 FAM196BA6NMK8 535 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 C6orf229H3BNL8 230 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 RASSF7Q02833 373 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 CTAGE1Q96RT6 745 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 CALM1P0DP23 149 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 CALM2P0DP24 149 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 CALM3P0DP25 149 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 RAPGEF1Q13905 1077 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 NFRKBQ6P4R8 1299 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 CLEC4GQ6UXB4 293 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 MAEAQ7L5Y9 396 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 TXNRD3Q86VQ6 643 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 TMEM139Q8IV31 216 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 OR8K1Q8NGG5 319 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 TUBGCP2Q9BSJ2 902 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 GOPCQ9HD26 462 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.9□□□□□ -0.66
CMC1-209ENST00000477739 RBM28Q9NW13 759 aaKnown RBP10.9□□□□□ -0.66
CMC1-209ENST00000477739 ADD3Q9UEY8 706 aaKnown RBP10.9□□□□□ -0.66
CMC1-209ENST00000477739 HYOU1Q9Y4L1 999 aa10.9□□□□□ -0.66
CMC1-209ENST00000477739 XDHP47989 1333 aa10.9□□□□□ -0.67
CMC1-209ENST00000477739 POTEMA6NI47 508 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 SLC30A10Q6XR72 485 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 HDAC7Q8WUI4 952 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 BPIFA3Q9BQP9 254 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 ANKZF1Q9H8Y5 726 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 PKD2L1Q9P0L9 805 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 ZSCAN5CA6NGD5 496 aaPredicted RBP10.89□□□□□ -0.67
CMC1-209ENST00000477739 KRT86O43790 486 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 TCP11X2Q5H9J9 407 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 TAX1BP1Q86VP1 789 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 RRP36Q96EU6 259 aaKnown RBP10.89□□□□□ -0.67
CMC1-209ENST00000477739 ANKRD2Q9GZV1 360 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 SEC63Q9UGP8 760 aaKnown RBP10.89□□□□□ -0.67
CMC1-209ENST00000477739 FAM205AQ6ZU69 1335 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 TRAF5O00463 557 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 LDHBP07195 334 aaKnown RBP10.89□□□□□ -0.67
CMC1-209ENST00000477739 PLCG1P19174 1290 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 KIF5BP33176 963 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 PDE6BP35913 854 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 GGCXP38435 758 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 DCAF17Q5H9S7 520 aaPredicted RBP10.89□□□□□ -0.67
CMC1-209ENST00000477739 TMTC1Q8IUR5 882 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 BLIDQ8IZY5 108 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 AFAP1L1Q8TED9 768 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 CNOT6LQ96LI5 555 aaKnown RBP10.89□□□□□ -0.67
CMC1-209ENST00000477739 IFIH1Q9BYX4 1025 aaKnown RBP10.89□□□□□ -0.67
CMC1-209ENST00000477739 ZNF804BA4D1E1 1349 aa10.89□□□□□ -0.67
CMC1-209ENST00000477739 UBAP1LF5GYI3 381 aa10.88□□□□□ -0.67
CMC1-209ENST00000477739 TAL1P17542 331 aaPredicted RBP10.88□□□□□ -0.67
CMC1-209ENST00000477739 KIFC2Q96AC6 838 aa10.88□□□□□ -0.67
CMC1-209ENST00000477739 PPP1R3GB7ZBB8 358 aa10.88□□□□□ -0.67
CMC1-209ENST00000477739 UBE2SQ16763 222 aa10.88□□□□□ -0.67
CMC1-209ENST00000477739 PTF1AQ7RTS3 328 aa10.88□□□□□ -0.67
CMC1-209ENST00000477739 CABP7Q86V35 215 aa10.88□□□□□ -0.67
CMC1-209ENST00000477739 SHISA4Q96DD7 197 aa10.88□□□□□ -0.67
CMC1-209ENST00000477739 RIOK1Q9BRS2 568 aaKnown RBP10.88□□□□□ -0.67
CMC1-209ENST00000477739 TLDC2A0PJX2 215 aa10.88□□□□□ -0.67
CMC1-209ENST00000477739 GOLGA6CA6NDK9 693 aa10.88□□□□□ -0.67
CMC1-209ENST00000477739 GOLGA6DP0CG33 693 aa10.88□□□□□ -0.67
CMC1-209ENST00000477739 MNAT1P51948 309 aa10.88□□□□□ -0.67
CMC1-209ENST00000477739 TCP10Q12799 353 aa10.88□□□□□ -0.67
CMC1-209ENST00000477739 STK4Q13043 487 aa10.88□□□□□ -0.67
CMC1-209ENST00000477739 PPP2R5BQ15173 497 aa10.88□□□□□ -0.67
CMC1-209ENST00000477739 GOLGA6AQ9NYA3 693 aa10.88□□□□□ -0.67
CMC1-209ENST00000477739 TTF2Q9UNY4 1162 aaKnown RBP10.88□□□□□ -0.67
CMC1-209ENST00000477739 ATRNO75882 1429 aa10.88□□□□□ -0.67
CMC1-209ENST00000477739 A0A1B0GTH6 734 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 CCDC151A5D8V7 595 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 GOLGA6BA6NDN3 693 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 CYLC1P35663 651 aaPredicted RBP10.87□□□□□ -0.67
CMC1-209ENST00000477739 USP8P40818 1118 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 SF3B3Q15393 1217 aaKnown RBP10.87□□□□□ -0.67
CMC1-209ENST00000477739 TXNRD1Q16881 649 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 RDH13Q8NBN7 331 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 NSUN4Q96CB9 384 aaKnown RBP10.87□□□□□ -0.67
CMC1-209ENST00000477739 DCP1AQ9NPI6 582 aaPredicted RBP10.87□□□□□ -0.67
CMC1-209ENST00000477739 TJP1Q07157 1748 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 SMCO2A6NFE2 343 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 MEIS1O00470 390 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 BAG3O95817 575 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 MYBL2P10244 700 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 GFPT1Q06210 699 aaPredicted RBP10.87□□□□□ -0.67
CMC1-209ENST00000477739 PDCLQ13371 301 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 GLIS3Q8NEA6 775 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 RPGRQ92834 1020 aaKnown RBP10.87□□□□□ -0.67
CMC1-209ENST00000477739 BRIP1Q9BX63 1249 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 GLI3P10071 1580 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 TMEM110-MUSTN1A8MSY1 372 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 KLRF2D3W0D1 207 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 PRPF3O43395 683 aaKnown RBP10.87□□□□□ -0.67
CMC1-209ENST00000477739 ZRANB2O95218 330 aaKnown RBP eCLIP10.87□□□□□ -0.673e-8■■■□□ 15
CMC1-209ENST00000477739 ACTN2P35609 894 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 PAFAH1B1P43034 410 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 EHHADHQ08426 723 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 PKN1Q16512 942 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 BCAS4Q8TDM0 211 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 COG1Q8WTW3 980 aa10.87□□□□□ -0.67
CMC1-209ENST00000477739 SECISBP2LQ93073 1101 aaKnown RBP10.87□□□□□ -0.67
CMC1-209ENST00000477739 NHEJ1Q9H9Q4 299 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms