RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 ZSWIM9Q86XI8 627 aa6.2□□□□□ -1.42
CKS1B-207ENST00000477676 ZNF622Q969S3 477 aaKnown RBP eCLIP6.2□□□□□ -1.42
CKS1B-207ENST00000477676 BRIP1Q9BX63 1249 aa6.2□□□□□ -1.42
CKS1B-207ENST00000477676 CLEC4MQ9H2X3 399 aaPredicted RBP6.2□□□□□ -1.42
CKS1B-207ENST00000477676 PASKQ96RG2 1323 aa6.2□□□□□ -1.42
CKS1B-207ENST00000477676 CEMIPQ8WUJ3 1361 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 SNED1Q8TER0 1413 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 CENPFP49454 3210 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 MKI67P46013 3256 aaKnown RBP6.19□□□□□ -1.42
CKS1B-207ENST00000477676 FOXN1O15353 648 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 TSPAN15O95858 294 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 ABL1P00519 1130 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 FAM87AP0C7U9 286 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 SRGNP10124 158 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 ECM1Q16610 540 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 AOC3Q16853 763 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 ZNF790Q6PG37 636 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 TTLL10Q6ZVT0 673 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 CORO1BQ9BR76 489 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 LATS2Q9NRM7 1088 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 LMCD1Q9NZU5 365 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 CRIM1Q9NZV1 1036 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 KNSTRNQ9Y448 316 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 U3KQE9 123 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 KIF7Q2M1P5 1343 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 LTBP3Q9NS15 1303 aa6.19□□□□□ -1.42
CKS1B-207ENST00000477676 CNTNAP1P78357 1384 aa6.18□□□□□ -1.42
CKS1B-207ENST00000477676 LAMB4A4D0S4 1761 aa6.18□□□□□ -1.42
CKS1B-207ENST00000477676 LAMB2P55268 1798 aa6.18□□□□□ -1.42
CKS1B-207ENST00000477676 KDM3BQ7LBC6 1761 aa6.18□□□□□ -1.42
CKS1B-207ENST00000477676 STARD3NLO95772 234 aa6.18□□□□□ -1.42
CKS1B-207ENST00000477676 IL6STP40189 918 aaPredicted RBP6.18□□□□□ -1.42
CKS1B-207ENST00000477676 PCDH1Q08174 1060 aa6.18□□□□□ -1.42
CKS1B-207ENST00000477676 PEAR1Q5VY43 1037 aaPredicted RBP6.18□□□□□ -1.42
CKS1B-207ENST00000477676 PRPF40BQ6NWY9 871 aaKnown RBP6.18□□□□□ -1.42
CKS1B-207ENST00000477676 PHACTR3Q96KR7 559 aa6.18□□□□□ -1.42
CKS1B-207ENST00000477676 ZFYVE28Q9HCC9 887 aa6.18□□□□□ -1.42
CKS1B-207ENST00000477676 BRPF3Q9ULD4 1205 aa6.18□□□□□ -1.42
CKS1B-207ENST00000477676 USP16Q9Y5T5 823 aa6.18□□□□□ -1.42
CKS1B-207ENST00000477676 ZNF541Q9H0D2 1346 aa6.18□□□□□ -1.42
CKS1B-207ENST00000477676 THSD7BQ9C0I4 1608 aa6.17□□□□□ -1.42
CKS1B-207ENST00000477676 A0A096LPE4 126 aa6.17□□□□□ -1.42
CKS1B-207ENST00000477676 A0A1W2PPZ6 126 aa6.17□□□□□ -1.42
CKS1B-207ENST00000477676 KLRG2A4D1S0 409 aaPredicted RBP6.17□□□□□ -1.42
CKS1B-207ENST00000477676 DIAPH1O60610 1272 aaKnown RBP6.17□□□□□ -1.42
CKS1B-207ENST00000477676 ECEL1O95672 775 aa6.17□□□□□ -1.42
CKS1B-207ENST00000477676 PDE6BP35913 854 aa6.17□□□□□ -1.42
CKS1B-207ENST00000477676 FMR1Q06787 632 aaKnown RBP eCLIP6.17□□□□□ -1.42
CKS1B-207ENST00000477676 CDK5R2Q13319 367 aa6.17□□□□□ -1.42
CKS1B-207ENST00000477676 KCNMB1Q16558 191 aa6.17□□□□□ -1.42
CKS1B-207ENST00000477676 CC2D1BQ5T0F9 858 aaKnown RBP6.17□□□□□ -1.42
CKS1B-207ENST00000477676 STYK1Q6J9G0 422 aa6.17□□□□□ -1.42
CKS1B-207ENST00000477676 KRTAP5-3Q6L8H2 238 aa6.17□□□□□ -1.42
CKS1B-207ENST00000477676 SLC23A3Q6PIS1 610 aa6.17□□□□□ -1.42
CKS1B-207ENST00000477676 LIN37Q96GY3 246 aaPredicted RBP6.17□□□□□ -1.42
CKS1B-207ENST00000477676 PPP1R16BQ96T49 567 aa6.17□□□□□ -1.42
CKS1B-207ENST00000477676 PCGF6Q9BYE7 350 aa6.17□□□□□ -1.42
CKS1B-207ENST00000477676 TAOK3Q9H2K8 898 aa6.17□□□□□ -1.42
CKS1B-207ENST00000477676 TAF1DQ9H5J8 278 aaPredicted RBP6.17□□□□□ -1.42
CKS1B-207ENST00000477676 FOXD3Q9UJU5 478 aaPredicted RBP6.17□□□□□ -1.42
CKS1B-207ENST00000477676 CLSPNQ9HAW4 1339 aa6.17□□□□□ -1.42
CKS1B-207ENST00000477676 A0A087WZG4 1122 aa6.16□□□□□ -1.42
CKS1B-207ENST00000477676 GNAT3A8MTJ3 354 aa6.16□□□□□ -1.42
CKS1B-207ENST00000477676 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.16□□□□□ -1.42
CKS1B-207ENST00000477676 MTMR3Q13615 1198 aa6.16□□□□□ -1.42
CKS1B-207ENST00000477676 IFI16Q16666 785 aaKnown RBP6.16□□□□□ -1.42
CKS1B-207ENST00000477676 SYDE1Q6ZW31 735 aaPredicted RBP6.16□□□□□ -1.42
CKS1B-207ENST00000477676 CNBD1Q8NA66 436 aa6.16□□□□□ -1.42
CKS1B-207ENST00000477676 MASTLQ96GX5 879 aa6.16□□□□□ -1.42
CKS1B-207ENST00000477676 HRASLS5Q96KN8 279 aa6.16□□□□□ -1.42
CKS1B-207ENST00000477676 SETDB2Q96T68 719 aa6.16□□□□□ -1.42
CKS1B-207ENST00000477676 LIN7BQ9HAP6 207 aa6.16□□□□□ -1.42
CKS1B-207ENST00000477676 PRDM7Q9NQW5 492 aa6.16□□□□□ -1.42
CKS1B-207ENST00000477676 ZNF277Q9NRM2 450 aaPredicted RBP6.16□□□□□ -1.42
CKS1B-207ENST00000477676 PPP4R2Q9NY27 417 aa6.16□□□□□ -1.42
CKS1B-207ENST00000477676 PPP1R9AQ9ULJ8 1098 aa6.16□□□□□ -1.42
CKS1B-207ENST00000477676 BRCA2P51587 3418 aa6.16□□□□□ -1.42
CKS1B-207ENST00000477676 HTTP42858 3142 aa6.16□□□□□ -1.42
CKS1B-207ENST00000477676 NDUFB5O43674 189 aa6.15□□□□□ -1.42
CKS1B-207ENST00000477676 AOC2O75106 756 aa6.15□□□□□ -1.42
CKS1B-207ENST00000477676 TEFQ10587 303 aa6.15□□□□□ -1.42
CKS1B-207ENST00000477676 HLFQ16534 295 aa6.15□□□□□ -1.42
CKS1B-207ENST00000477676 ANGEL2Q5VTE6 544 aaKnown RBP6.15□□□□□ -1.42
CKS1B-207ENST00000477676 LDHDQ86WU2 507 aa6.15□□□□□ -1.42
CKS1B-207ENST00000477676 TTC5Q8N0Z6 440 aa6.15□□□□□ -1.42
CKS1B-207ENST00000477676 GJD3Q8N144 294 aa6.15□□□□□ -1.42
CKS1B-207ENST00000477676 PRDM10Q9NQV6 1147 aa6.15□□□□□ -1.42
CKS1B-207ENST00000477676 RAPGEFL1Q9UHV5 662 aa6.15□□□□□ -1.42
CKS1B-207ENST00000477676 PLAGL2Q9UPG8 496 aa6.15□□□□□ -1.42
CKS1B-207ENST00000477676 ANKRD36CQ5JPF3 1778 aa6.15□□□□□ -1.43
CKS1B-207ENST00000477676 ABCC12Q96J65 1359 aa6.15□□□□□ -1.43
CKS1B-207ENST00000477676 TMEM265A0A087WTH1 108 aa6.14□□□□□ -1.43
CKS1B-207ENST00000477676 FZD9O00144 591 aa6.14□□□□□ -1.43
CKS1B-207ENST00000477676 U2SURPO15042 1029 aaKnown RBP6.14□□□□□ -1.43
CKS1B-207ENST00000477676 FZD6O60353 706 aa6.14□□□□□ -1.43
CKS1B-207ENST00000477676 HSPA8P11142 646 aaKnown RBP6.14□□□□□ -1.43
CKS1B-207ENST00000477676 LBX1P52954 281 aa6.14□□□□□ -1.43
CKS1B-207ENST00000477676 OXCT1P55809 520 aa6.14□□□□□ -1.43
CKS1B-207ENST00000477676 PDE4CQ08493 712 aa6.14□□□□□ -1.43
CKS1B-207ENST00000477676 AP3B2Q13367 1082 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms