RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 CCSER1Q9C0I3 900 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 CEP131Q9UPN4 1083 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 A0A087WWV3 80 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 CYP3A4P08684 503 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 TAL1P17542 331 aaPredicted RBP13.84□□□□□ -0.19
PRPF39-203ENST00000477626 CIITAP33076 1130 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 MIGA2Q7L4E1 593 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 BMP3P12645 472 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 LONP1P36776 959 aaKnown RBP13.84□□□□□ -0.19
PRPF39-203ENST00000477626 DPCR1Q3MIW9 517 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 SPECC1Q5M775 1068 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 JMYQ8N9B5 988 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 IGLV3-22A0A075B6J6 115 aa13.83□□□□□ -0.2
PRPF39-203ENST00000477626 AKAP17AQ02040 695 aaKnown RBP13.83□□□□□ -0.2
PRPF39-203ENST00000477626 TBC1D10BQ4KMP7 808 aaPredicted RBP13.83□□□□□ -0.2
PRPF39-203ENST00000477626 ANO6Q4KMQ2 910 aa13.83□□□□□ -0.2
PRPF39-203ENST00000477626 ERCC4Q92889 916 aaPredicted RBP13.83□□□□□ -0.2
PRPF39-203ENST00000477626 HSD17B4P51659 736 aa13.83□□□□□ -0.2
PRPF39-203ENST00000477626 DGKZQ13574 1117 aa13.83□□□□□ -0.2
PRPF39-203ENST00000477626 TBCKQ8TEA7 893 aa13.83□□□□□ -0.2
PRPF39-203ENST00000477626 ZNF236Q9UL36 1845 aa13.83□□□□□ -0.2
PRPF39-203ENST00000477626 PLXNB2O15031 1838 aa13.83□□□□□ -0.2
PRPF39-203ENST00000477626 KLRC4O43908 158 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 SLFN14P0C7P3 912 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 CCDC192P0DO97 292 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 GNA11P29992 359 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 INPP5BP32019 993 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 SYKP43405 635 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 NAPAP54920 295 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 Q4G0T1 1027 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 SH3D19Q5HYK7 790 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 CCDC12Q8WUD4 166 aaPredicted RBP13.82□□□□□ -0.2
PRPF39-203ENST00000477626 MPHOSPH10O00566 681 aaKnown RBP13.82□□□□□ -0.2
PRPF39-203ENST00000477626 CAVIN2O95810 425 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 SREBF1P36956 1147 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 SLC1A4P43007 532 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 ADCY7P51828 1080 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 EHHADHQ08426 723 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 APTXQ7Z2E3 356 aaKnown RBP13.82□□□□□ -0.2
PRPF39-203ENST00000477626 APOBEC3FQ8IUX4 373 aaKnown RBP13.82□□□□□ -0.2
PRPF39-203ENST00000477626 PAGE5Q96GU1 130 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 C6orf50Q9HD87 102 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 KBTBD4Q9NVX7 518 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 USP2O75604 605 aaPredicted RBP13.82□□□□□ -0.2
PRPF39-203ENST00000477626 ASNSP08243 561 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 PTPRAP18433 802 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 NLRP12P59046 1061 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 PNOCQ13519 176 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 NEK8Q86SG6 692 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 POTEDQ86YR6 584 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 REXO1Q8N1G1 1221 aaKnown RBP13.82□□□□□ -0.2
PRPF39-203ENST00000477626 AFG3L2Q9Y4W6 797 aa13.82□□□□□ -0.2
PRPF39-203ENST00000477626 TNFAIP1Q13829 316 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 TMEM119Q4V9L6 283 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 ANGEL2Q5VTE6 544 aaKnown RBP13.81□□□□□ -0.2
PRPF39-203ENST00000477626 PIBF1Q8WXW3 757 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 CCDC173Q0VFZ6 552 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 CUL4BQ13620 913 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 NONOQ15233 471 aaKnown RBP eCLIP13.81□□□□□ -0.2
PRPF39-203ENST00000477626 UBE2SQ16763 222 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 FAM83BQ5T0W9 1011 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 BRMS1Q9HCU9 246 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 TMOD2Q9NZR1 351 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 PLXNA1Q9UIW2 1896 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 ECM1Q16610 540 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 CCDC84Q86UT8 332 aaPredicted RBP13.81□□□□□ -0.2
PRPF39-203ENST00000477626 SCYL3Q8IZE3 742 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 PNMA5Q96PV4 448 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 VEZTQ9HBM0 779 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 BIN2Q9UBW5 565 aaPredicted RBP13.81□□□□□ -0.2
PRPF39-203ENST00000477626 USP25Q9UHP3 1055 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 SERTAD1Q9UHV2 236 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 MAN1B1Q9UKM7 699 aa13.81□□□□□ -0.2
PRPF39-203ENST00000477626 TDP2O95551 362 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 STX1AQ16623 288 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 SNCAIPQ9Y6H5 919 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 ZNFX1Q9P2E3 1918 aaKnown RBP13.8□□□□□ -0.2
PRPF39-203ENST00000477626 POLR2DO15514 142 aaKnown RBP13.8□□□□□ -0.2
PRPF39-203ENST00000477626 MYO1BO43795 1136 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 AP3B2Q13367 1082 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 CCDC73Q6ZRK6 1079 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 ARHGAP27Q6ZUM4 889 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 LUZP1Q86V48 1076 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 ZSCAN29Q8IWY8 852 aaPredicted RBP13.8□□□□□ -0.2
PRPF39-203ENST00000477626 LPAR1Q92633 364 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 WNK4Q96J92 1243 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 SLC38A10Q9HBR0 1119 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 GOPCQ9HD26 462 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 SEC63Q9UGP8 760 aaKnown RBP13.8□□□□□ -0.2
PRPF39-203ENST00000477626 FEM1BQ9UK73 627 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 VAV3Q9UKW4 847 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 NOL7Q9UMY1 257 aaKnown RBP13.8□□□□□ -0.2
PRPF39-203ENST00000477626 ATP2A1O14983 1001 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 ZNF18P17022 549 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 MCM7P33993 719 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 USP11P51784 963 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 STAT2P52630 851 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 HOMER1Q86YM7 354 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 DNAJC25Q9H1X3 360 aa13.8□□□□□ -0.2
PRPF39-203ENST00000477626 PP2D1A8MPX8 630 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms