RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 CHMP4BP1P59074 171 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 SNAP25P60880 206 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 PSMC6P62333 389 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 ITGA7Q13683 1181 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 ADGRE1Q14246 886 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 FSCN1Q16658 493 aaKnown RBP7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 FAM47CQ5HY64 1035 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 TSHZ3Q63HK5 1081 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 DEFB128Q7Z7B8 93 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 FBXO16Q8IX29 292 aaPredicted RBP7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 SIRT2Q8IXJ6 389 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 HERVK_113Q902F9 699 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 SCLYQ96I15 445 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 GPATCH3Q96I76 525 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 AGBL1Q96MI9 1066 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 NECAB3Q96P71 396 aaPredicted RBP7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 STRBPQ96SI9 672 aaKnown RBP7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 TRPV6Q9H1D0 765 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 YBX2Q9Y2T7 364 aaKnown RBP7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 SLC4A7Q9Y6M7 1214 aa7.95□□□□□ -1.14
RTFDC1-206ENST00000477485 PTPRSQ13332 1948 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 ASB14A6NK59 587 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 M0R2C6 588 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 ATP2A1O14983 1001 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 B4GALT4O60513 344 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 CABYRO75952 493 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 SLC3A2P08195 630 aaKnown RBP7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 MYL3P08590 195 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 SLC1A4P43007 532 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 OAZ1P54368 228 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 PDE4BQ07343 736 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 CCDC96Q2M329 555 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 SBK1Q52WX2 424 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 NSMFQ6X4W1 530 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 KCTD1Q719H9 257 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 RPUSD2Q8IZ73 545 aaKnown RBP7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 GMCL1P1Q8NEA9 526 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 APPBP2Q92624 585 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 FAM122AQ96E09 287 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 FGD4Q96M96 766 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 TRERF1Q96PN7 1200 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 CHMP4BQ9H444 224 aaKnown RBP7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 CERS4Q9HA82 394 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 A1CFQ9NQ94 594 aaKnown RBP7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 ECHDC1Q9NTX5 307 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 MTMR4Q9NYA4 1195 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 STX8Q9UNK0 236 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 ASTN1O14525 1302 aa7.94□□□□□ -1.14
RTFDC1-206ENST00000477485 MYH7BA7E2Y1 1941 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 SOWAHBA6NEL2 793 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 CTAGE5O15320 804 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 RNF113AO15541 343 aaKnown RBP7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 GTPBP6O43824 516 aaPredicted RBP7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 CD4P01730 458 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 ATP2A2P16615 1042 aaKnown RBP7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 SMPD1P17405 629 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 GNAT2P19087 354 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 MCCP23508 829 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 TFAP4Q01664 338 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 TFF2Q03403 129 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 RASIP1Q5U651 963 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 GIMAP6Q6P9H5 292 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 KIAA1211Q6ZU35 1233 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 FAM160B2Q86V87 743 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 KBTBD3Q8NAB2 608 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 PPP1R13LQ8WUF5 828 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 CHURC1Q8WUH1 139 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 OSBP2Q969R2 916 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 NOC4LQ9BVI4 516 aaKnown RBP7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 NACAP1Q9BZK3 213 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 KATNBL1Q9H079 304 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 NAPBQ9H115 298 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 WNT8AQ9H1J5 351 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 EPB41L4AQ9HCS5 686 aaPredicted RBP7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 GPHNQ9NQX3 736 aaPredicted RBP7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 PDGFCQ9NRA1 345 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 CCPG1Q9ULG6 757 aa7.93□□□□□ -1.14
RTFDC1-206ENST00000477485 KIAA1217Q5T5P2 1943 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 IGKV6D-41A0A0C4DH26 115 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 PTPDC1A2A3K4 754 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 TSPY2A6NKD2 308 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 RFXAPO00287 272 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 CA3P07451 260 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 FDX1P10109 184 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 CYP2C9P11712 490 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 ACTN1P12814 892 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 KCNQ1P51787 676 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 AAK1Q2M2I8 961 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 LRRFIP1Q32MZ4 808 aaKnown RBP7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 MUM1L1Q5H9M0 696 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 TMEM67Q5HYA8 995 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 TMEM63BQ5T3F8 832 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 RASGRP2Q7LDG7 609 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 IFNL3Q8IZI9 196 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 FAM133AQ8N9E0 248 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 OR6J1Q8NGC5 347 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 STAG1Q8WVM7 1258 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 ARNTL2Q8WYA1 636 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 PURBQ96QR8 312 aaKnown RBP7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 FSD1Q9BTV5 496 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms