RNA–Protein interactions for RNA: ENST00000477440.6

ARHGEF3-208, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-208ENST00000477440 CYP39A1Q9NYL5 469 aa29.56■■■□□ 2.32
ARHGEF3-208ENST00000477440 PNMA2Q9UL42 364 aa29.56■■■□□ 2.32
ARHGEF3-208ENST00000477440 PDE4DIPQ5VU43 2346 aa29.55■■■□□ 2.32
ARHGEF3-208ENST00000477440 CCDC69A6NI79 296 aa29.55■■■□□ 2.32
ARHGEF3-208ENST00000477440 POTEB2H3BUK9 544 aa29.55■■■□□ 2.32
ARHGEF3-208ENST00000477440 DDAH1O94760 285 aa29.55■■■□□ 2.32
ARHGEF3-208ENST00000477440 CNGA1P29973 690 aa29.55■■■□□ 2.32
ARHGEF3-208ENST00000477440 EXOSC10Q01780 885 aaKnown RBP29.55■■■□□ 2.32
ARHGEF3-208ENST00000477440 DHX32Q7L7V1 743 aaKnown RBP29.55■■■□□ 2.32
ARHGEF3-208ENST00000477440 CLEC4DQ8WXI8 215 aa29.55■■■□□ 2.32
ARHGEF3-208ENST00000477440 LRRC37A2A6NM11 1700 aa29.54■■■□□ 2.32
ARHGEF3-208ENST00000477440 LHX8Q68G74 356 aa29.54■■■□□ 2.32
ARHGEF3-208ENST00000477440 ZNF467Q7Z7K2 595 aaPredicted RBP29.54■■■□□ 2.32
ARHGEF3-208ENST00000477440 TMTC2Q8N394 836 aa29.54■■■□□ 2.32
ARHGEF3-208ENST00000477440 EPB41L2O43491 1005 aaKnown RBP29.53■■■□□ 2.32
ARHGEF3-208ENST00000477440 CPA1P15085 419 aa29.53■■■□□ 2.32
ARHGEF3-208ENST00000477440 MAMDC4Q6UXC1 1216 aa29.53■■■□□ 2.32
ARHGEF3-208ENST00000477440 UBE2Q1Q7Z7E8 422 aa29.53■■■□□ 2.32
ARHGEF3-208ENST00000477440 RAB11FIP4Q86YS3 637 aa29.53■■■□□ 2.32
ARHGEF3-208ENST00000477440 MTMR8Q96EF0 704 aa29.53■■■□□ 2.32
ARHGEF3-208ENST00000477440 JAKMIP1Q96N16 626 aaKnown RBP29.53■■■□□ 2.32
ARHGEF3-208ENST00000477440 USP26Q9BXU7 913 aa29.53■■■□□ 2.32
ARHGEF3-208ENST00000477440 DDX20Q9UHI6 824 aaKnown RBP29.53■■■□□ 2.32
ARHGEF3-208ENST00000477440 OGDHLQ9ULD0 1010 aa29.53■■■□□ 2.32
ARHGEF3-208ENST00000477440 ASTN1O14525 1302 aa29.52■■■□□ 2.32
ARHGEF3-208ENST00000477440 SYNGAP1Q96PV0 1343 aa29.52■■■□□ 2.32
ARHGEF3-208ENST00000477440 SOWAHBA6NEL2 793 aa29.52■■■□□ 2.32
ARHGEF3-208ENST00000477440 CYTH3O43739 400 aa29.52■■■□□ 2.32
ARHGEF3-208ENST00000477440 FARP2O94887 1054 aaPredicted RBP29.52■■■□□ 2.32
ARHGEF3-208ENST00000477440 RXRAP19793 462 aa29.52■■■□□ 2.32
ARHGEF3-208ENST00000477440 SGMS1Q86VZ5 419 aa29.52■■■□□ 2.32
ARHGEF3-208ENST00000477440 MSL3Q8N5Y2 521 aaKnown RBP29.52■■■□□ 2.32
ARHGEF3-208ENST00000477440 MAP3K14Q99558 947 aa29.52■■■□□ 2.32
ARHGEF3-208ENST00000477440 SNAI1O95863 264 aaPredicted RBP29.51■■■□□ 2.31
ARHGEF3-208ENST00000477440 BAATQ14032 418 aaPredicted RBP29.51■■■□□ 2.31
ARHGEF3-208ENST00000477440 SLC30A10Q6XR72 485 aa29.51■■■□□ 2.31
ARHGEF3-208ENST00000477440 FBXO11Q86XK2 927 aa29.51■■■□□ 2.31
ARHGEF3-208ENST00000477440 CTCFLQ8NI51 663 aaPredicted RBP29.51■■■□□ 2.31
ARHGEF3-208ENST00000477440 PURBQ96QR8 312 aaKnown RBP29.51■■■□□ 2.31
ARHGEF3-208ENST00000477440 RIOX1Q9H6W3 641 aa29.51■■■□□ 2.31
ARHGEF3-208ENST00000477440 SLC12A7Q9Y666 1083 aa29.51■■■□□ 2.31
ARHGEF3-208ENST00000477440 PTPDC1A2A3K4 754 aa29.5■■■□□ 2.31
ARHGEF3-208ENST00000477440 HMGB1P09429 215 aaKnown RBP29.5■■■□□ 2.31
ARHGEF3-208ENST00000477440 CAPN2P17655 700 aa29.5■■■□□ 2.31
ARHGEF3-208ENST00000477440 ANO1Q5XXA6 986 aa29.5■■■□□ 2.31
ARHGEF3-208ENST00000477440 HOMER1Q86YM7 354 aa29.5■■■□□ 2.31
ARHGEF3-208ENST00000477440 PIGSQ96S52 555 aa29.5■■■□□ 2.31
ARHGEF3-208ENST00000477440 NRBP1Q9UHY1 535 aa29.5■■■□□ 2.31
ARHGEF3-208ENST00000477440 ABCB11O95342 1321 aa29.49■■■□□ 2.31
ARHGEF3-208ENST00000477440 ZBTB5O15062 677 aa29.49■■■□□ 2.31
ARHGEF3-208ENST00000477440 SEPT4O43236 478 aa29.49■■■□□ 2.31
ARHGEF3-208ENST00000477440 PPP1R11O60927 126 aaPredicted RBP29.49■■■□□ 2.31
ARHGEF3-208ENST00000477440 KIF5BP33176 963 aa29.49■■■□□ 2.31
ARHGEF3-208ENST00000477440 ARMCX2Q7L311 632 aa29.49■■■□□ 2.31
ARHGEF3-208ENST00000477440 CCDC144CPQ8IYA2 1237 aa29.49■■■□□ 2.31
ARHGEF3-208ENST00000477440 DIS3LQ8TF46 1054 aaKnown RBP29.49■■■□□ 2.31
ARHGEF3-208ENST00000477440 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.49■■■□□ 2.31
ARHGEF3-208ENST00000477440 CNPY2Q9Y2B0 182 aa29.49■■■□□ 2.31
ARHGEF3-208ENST00000477440 MSCO60682 206 aa29.48■■■□□ 2.31
ARHGEF3-208ENST00000477440 ZNF865P0CJ78 1059 aaPredicted RBP29.48■■■□□ 2.31
ARHGEF3-208ENST00000477440 MNX1P50219 401 aaPredicted RBP29.48■■■□□ 2.31
ARHGEF3-208ENST00000477440 RNF207Q6ZRF8 634 aa29.48■■■□□ 2.31
ARHGEF3-208ENST00000477440 MICU3Q86XE3 530 aa29.48■■■□□ 2.31
ARHGEF3-208ENST00000477440 ANKLE1Q8NAG6 615 aa29.48■■■□□ 2.31
ARHGEF3-208ENST00000477440 AMNQ9BXJ7 453 aa29.48■■■□□ 2.31
ARHGEF3-208ENST00000477440 DDX49Q9Y6V7 483 aaKnown RBP29.48■■■□□ 2.31
ARHGEF3-208ENST00000477440 PLEKHA8P1O95397 391 aa29.47■■■□□ 2.31
ARHGEF3-208ENST00000477440 CALM1P0DP23 149 aa29.47■■■□□ 2.31
ARHGEF3-208ENST00000477440 CALM2P0DP24 149 aa29.47■■■□□ 2.31
ARHGEF3-208ENST00000477440 CALM3P0DP25 149 aa29.47■■■□□ 2.31
ARHGEF3-208ENST00000477440 RPS6P62753 249 aaKnown RBP29.47■■■□□ 2.31
ARHGEF3-208ENST00000477440 APOA5Q6Q788 366 aa29.47■■■□□ 2.31
ARHGEF3-208ENST00000477440 BLOC1S2Q6QNY1 142 aa29.47■■■□□ 2.31
ARHGEF3-208ENST00000477440 BRPF3Q9ULD4 1205 aa29.47■■■□□ 2.31
ARHGEF3-208ENST00000477440 ALPK3Q96L96 1907 aa29.47■■■□□ 2.31
ARHGEF3-208ENST00000477440 CALML3P27482 149 aa29.46■■■□□ 2.31
ARHGEF3-208ENST00000477440 PAWRQ96IZ0 340 aaKnown RBP29.46■■■□□ 2.31
ARHGEF3-208ENST00000477440 ZHX1Q9UKY1 873 aaPredicted RBP29.46■■■□□ 2.31
ARHGEF3-208ENST00000477440 CASTP20810 708 aaKnown RBP29.45■■■□□ 2.31
ARHGEF3-208ENST00000477440 PIBF1Q8WXW3 757 aa29.45■■■□□ 2.31
ARHGEF3-208ENST00000477440 TBC1D5Q92609 795 aa29.45■■■□□ 2.31
ARHGEF3-208ENST00000477440 SPZ1Q9BXG8 430 aa29.45■■■□□ 2.31
ARHGEF3-208ENST00000477440 MRPL11Q9Y3B7 192 aaKnown RBP29.45■■■□□ 2.31
ARHGEF3-208ENST00000477440 ASB14A6NK59 587 aa29.44■■■□□ 2.3
ARHGEF3-208ENST00000477440 RPS6KB1P23443 525 aa29.44■■■□□ 2.3
ARHGEF3-208ENST00000477440 Q6ZUG5 572 aa29.44■■■□□ 2.3
ARHGEF3-208ENST00000477440 CMTR1Q8N1G2 835 aaKnown RBP29.44■■■□□ 2.3
ARHGEF3-208ENST00000477440 SRBD1Q8N5C6 995 aaKnown RBP29.44■■■□□ 2.3
ARHGEF3-208ENST00000477440 KATNBL1Q9H079 304 aa29.44■■■□□ 2.3
ARHGEF3-208ENST00000477440 PNMA6FA0A0J9YX94 578 aa29.43■■■□□ 2.3
ARHGEF3-208ENST00000477440 KLF18A0A0U1RQI7 1052 aa29.43■■■□□ 2.3
ARHGEF3-208ENST00000477440 OPLAHO14841 1288 aa29.43■■■□□ 2.3
ARHGEF3-208ENST00000477440 PSMA5P28066 241 aa29.43■■■□□ 2.3
ARHGEF3-208ENST00000477440 GNAQP50148 359 aa29.43■■■□□ 2.3
ARHGEF3-208ENST00000477440 ALDH5A1P51649 535 aaPredicted RBP29.43■■■□□ 2.3
ARHGEF3-208ENST00000477440 FGD1P98174 961 aa29.43■■■□□ 2.3
ARHGEF3-208ENST00000477440 ACVR2BQ13705 512 aa29.43■■■□□ 2.3
ARHGEF3-208ENST00000477440 SYNE3Q6ZMZ3 975 aa29.43■■■□□ 2.3
ARHGEF3-208ENST00000477440 FANCBQ8NB91 859 aa29.43■■■□□ 2.3
ARHGEF3-208ENST00000477440 RGS22Q8NE09 1264 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms