RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 JAMLQ86YT9 394 aa5.22□□□□□ -1.57
XRN1-211ENST00000477237 AEBP1Q8IUX7 1158 aa5.22□□□□□ -1.57
XRN1-211ENST00000477237 DBR1Q9UK59 544 aaKnown RBP5.22□□□□□ -1.57
XRN1-211ENST00000477237 HS3ST3A1Q9Y663 406 aa5.22□□□□□ -1.57
XRN1-211ENST00000477237 RAD51AP2Q09MP3 1159 aa5.21□□□□□ -1.58
XRN1-211ENST00000477237 RGL3Q3MIN7 710 aa5.21□□□□□ -1.58
XRN1-211ENST00000477237 GLB1LQ6UWU2 654 aa5.21□□□□□ -1.58
XRN1-211ENST00000477237 REC114Q7Z4M0 266 aa5.21□□□□□ -1.58
XRN1-211ENST00000477237 NAT16Q8N8M0 369 aa5.21□□□□□ -1.58
XRN1-211ENST00000477237 FBXO27Q8NI29 283 aa5.21□□□□□ -1.58
XRN1-211ENST00000477237 ZBTB8AQ96BR9 441 aa5.21□□□□□ -1.58
XRN1-211ENST00000477237 SLC12A9Q9BXP2 914 aa5.21□□□□□ -1.58
XRN1-211ENST00000477237 RXFP1Q9HBX9 757 aa5.21□□□□□ -1.58
XRN1-211ENST00000477237 ZNF536O15090 1300 aa5.21□□□□□ -1.58
XRN1-211ENST00000477237 CLEC3AO75596 197 aa5.2□□□□□ -1.58
XRN1-211ENST00000477237 GSTM1P09488 218 aa5.2□□□□□ -1.58
XRN1-211ENST00000477237 SMAD4Q13485 552 aaKnown RBP5.2□□□□□ -1.58
XRN1-211ENST00000477237 ICAM4Q14773 271 aa5.2□□□□□ -1.58
XRN1-211ENST00000477237 LGI4Q8N135 537 aa5.2□□□□□ -1.58
XRN1-211ENST00000477237 RHOVQ96L33 236 aa5.2□□□□□ -1.58
XRN1-211ENST00000477237 KLC2Q9H0B6 622 aa5.2□□□□□ -1.58
XRN1-211ENST00000477237 GMIPQ9P107 970 aa5.2□□□□□ -1.58
XRN1-211ENST00000477237 FBXL21Q9UKT6 434 aa5.2□□□□□ -1.58
XRN1-211ENST00000477237 GTF3C3Q9Y5Q9 886 aa5.2□□□□□ -1.58
XRN1-211ENST00000477237 PRPF40AO75400 957 aaKnown RBP5.19□□□□□ -1.58
XRN1-211ENST00000477237 ST13P50502 369 aaKnown RBP5.19□□□□□ -1.58
XRN1-211ENST00000477237 MLECQ14165 292 aa5.19□□□□□ -1.58
XRN1-211ENST00000477237 MPP2Q14168 576 aa5.19□□□□□ -1.58
XRN1-211ENST00000477237 TAF1CQ15572 869 aaPredicted RBP5.19□□□□□ -1.58
XRN1-211ENST00000477237 OVOS1Q6IE37 1185 aa5.19□□□□□ -1.58
XRN1-211ENST00000477237 PCDHB12Q9Y5F1 795 aa5.19□□□□□ -1.58
XRN1-211ENST00000477237 FAM160A1Q05DH4 1040 aa5.18□□□□□ -1.58
XRN1-211ENST00000477237 KIAA2012Q0VF49 1180 aa5.18□□□□□ -1.58
XRN1-211ENST00000477237 CDCP2Q5VXM1 449 aa5.18□□□□□ -1.58
XRN1-211ENST00000477237 TMEM192Q8IY95 271 aa5.18□□□□□ -1.58
XRN1-211ENST00000477237 CPA5Q8WXQ8 436 aa5.18□□□□□ -1.58
XRN1-211ENST00000477237 TSPAN17Q96FV3 270 aa5.18□□□□□ -1.58
XRN1-211ENST00000477237 ARID3AQ99856 593 aa5.18□□□□□ -1.58
XRN1-211ENST00000477237 DUSP9Q99956 384 aaKnown RBP5.18□□□□□ -1.58
XRN1-211ENST00000477237 MKRN2Q9H000 416 aaKnown RBP5.18□□□□□ -1.58
XRN1-211ENST00000477237 CD248Q9HCU0 757 aa5.18□□□□□ -1.58
XRN1-211ENST00000477237 LTBP3Q9NS15 1303 aa5.18□□□□□ -1.58
XRN1-211ENST00000477237 MROH6A6NGR9 719 aa5.17□□□□□ -1.58
XRN1-211ENST00000477237 GSNP06396 782 aa5.17□□□□□ -1.58
XRN1-211ENST00000477237 GLI4P10075 376 aa5.17□□□□□ -1.58
XRN1-211ENST00000477237 CACNB2Q08289 660 aaPredicted RBP5.17□□□□□ -1.58
XRN1-211ENST00000477237 AUHQ13825 339 aaKnown RBP5.17□□□□□ -1.58
XRN1-211ENST00000477237 LINC00482Q8N8I6 264 aa5.17□□□□□ -1.58
XRN1-211ENST00000477237 GOLM1Q8NBJ4 401 aa5.17□□□□□ -1.58
XRN1-211ENST00000477237 DDX11Q96FC9 970 aa5.17□□□□□ -1.58
XRN1-211ENST00000477237 CDK5RAP1Q96SZ6 601 aaKnown RBP5.17□□□□□ -1.58
XRN1-211ENST00000477237 CNNM2Q9H8M5 875 aa5.17□□□□□ -1.58
XRN1-211ENST00000477237 PPP4R1LQ9P1A2 415 aa5.17□□□□□ -1.58
XRN1-211ENST00000477237 PCDHB14Q9Y5E9 798 aa5.17□□□□□ -1.58
XRN1-211ENST00000477237 TLR3O15455 904 aaKnown RBP5.16□□□□□ -1.58
XRN1-211ENST00000477237 FGF10O15520 208 aaPredicted RBP5.16□□□□□ -1.58
XRN1-211ENST00000477237 SMARCA5O60264 1052 aaPredicted RBP5.16□□□□□ -1.58
XRN1-211ENST00000477237 CORO7P57737 925 aa5.16□□□□□ -1.58
XRN1-211ENST00000477237 BORAQ6PGQ7 559 aa5.16□□□□□ -1.58
XRN1-211ENST00000477237 PALM2Q8IXS6 379 aa5.16□□□□□ -1.58
XRN1-211ENST00000477237 ATG4CQ96DT6 458 aa5.16□□□□□ -1.58
XRN1-211ENST00000477237 TMEM74Q96NL1 305 aa5.16□□□□□ -1.58
XRN1-211ENST00000477237 SYT3Q9BQG1 590 aa5.16□□□□□ -1.58
XRN1-211ENST00000477237 PRR13Q9NZ81 148 aa5.16□□□□□ -1.58
XRN1-211ENST00000477237 C11orf21Q9P2W6 132 aa5.16□□□□□ -1.58
XRN1-211ENST00000477237 CTSHP09668 335 aa5.15□□□□□ -1.59
XRN1-211ENST00000477237 GARTP22102 1010 aa5.15□□□□□ -1.59
XRN1-211ENST00000477237 RPL13P26373 211 aaKnown RBP5.15□□□□□ -1.59
XRN1-211ENST00000477237 GBP2P32456 591 aaPredicted RBP5.15□□□□□ -1.59
XRN1-211ENST00000477237 FAM26FQ5R3K3 315 aa5.15□□□□□ -1.59
XRN1-211ENST00000477237 SNAP47Q5SQN1 464 aa5.15□□□□□ -1.59
XRN1-211ENST00000477237 MCTP2Q6DN12 878 aa5.15□□□□□ -1.59
XRN1-211ENST00000477237 CYP2R1Q6VVX0 501 aa5.15□□□□□ -1.59
XRN1-211ENST00000477237 USP48Q86UV5 1035 aa5.15□□□□□ -1.59
XRN1-211ENST00000477237 NLGN2Q8NFZ4 835 aa5.15□□□□□ -1.59
XRN1-211ENST00000477237 GORASP1Q9BQQ3 440 aa5.15□□□□□ -1.59
XRN1-211ENST00000477237 DSCC1Q9BVC3 393 aa5.15□□□□□ -1.59
XRN1-211ENST00000477237 SRRTQ9BXP5 876 aaKnown RBP5.15□□□□□ -1.59
XRN1-211ENST00000477237 USP31Q70CQ4 1352 aa5.15□□□□□ -1.59
XRN1-211ENST00000477237 ATE1O95260 518 aa5.14□□□□□ -1.59
XRN1-211ENST00000477237 THBS2P35442 1172 aa5.14□□□□□ -1.59
XRN1-211ENST00000477237 CCNFP41002 786 aa5.14□□□□□ -1.59
XRN1-211ENST00000477237 C9orf131Q5VYM1 1079 aa5.14□□□□□ -1.59
XRN1-211ENST00000477237 ZNF585AQ6P3V2 769 aa5.14□□□□□ -1.59
XRN1-211ENST00000477237 FAM196AQ6ZSG2 479 aa5.14□□□□□ -1.59
XRN1-211ENST00000477237 FAM124AQ86V42 546 aa5.14□□□□□ -1.59
XRN1-211ENST00000477237 SLC6A18Q96N87 628 aa5.14□□□□□ -1.59
XRN1-211ENST00000477237 WDR26Q9H7D7 661 aa5.14□□□□□ -1.59
XRN1-211ENST00000477237 BRMS1Q9HCU9 246 aa5.14□□□□□ -1.59
XRN1-211ENST00000477237 FBLN5Q9UBX5 448 aa5.14□□□□□ -1.59
XRN1-211ENST00000477237 H0Y8X5 98 aa5.13□□□□□ -1.59
XRN1-211ENST00000477237 SHOXO15266 292 aa5.13□□□□□ -1.59
XRN1-211ENST00000477237 GPR42O15529 346 aa5.13□□□□□ -1.59
XRN1-211ENST00000477237 LAMTOR5O43504 91 aa5.13□□□□□ -1.59
XRN1-211ENST00000477237 C8BP07358 591 aa5.13□□□□□ -1.59
XRN1-211ENST00000477237 ACRP10323 421 aa5.13□□□□□ -1.59
XRN1-211ENST00000477237 R3HDM1Q15032 1099 aaKnown RBP5.13□□□□□ -1.59
XRN1-211ENST00000477237 CWF19L1Q69YN2 538 aaKnown RBP5.13□□□□□ -1.59
XRN1-211ENST00000477237 NLRC3Q7RTR2 1065 aa5.13□□□□□ -1.59
XRN1-211ENST00000477237 ZNF575Q86XF7 245 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms