RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 CNNM2Q9H8M5 875 aa22.38■■□□□ 1.17
GMDS-204ENST00000476972 HOMER2Q9NSB8 354 aa22.38■■□□□ 1.17
GMDS-204ENST00000476972 TMEM39AQ9NV64 488 aa22.38■■□□□ 1.17
GMDS-204ENST00000476972 ZHX1Q9UKY1 873 aaPredicted RBP22.38■■□□□ 1.17
GMDS-204ENST00000476972 SYNRGQ9UMZ2 1314 aa22.37■■□□□ 1.17
GMDS-204ENST00000476972 CYP21A2P08686 494 aa22.37■■□□□ 1.17
GMDS-204ENST00000476972 RAG1P15918 1043 aa22.37■■□□□ 1.17
GMDS-204ENST00000476972 SLC16A2P36021 539 aa22.37■■□□□ 1.17
GMDS-204ENST00000476972 SMAD3P84022 425 aaKnown RBP22.37■■□□□ 1.17
GMDS-204ENST00000476972 KCNA10Q16322 511 aa22.37■■□□□ 1.17
GMDS-204ENST00000476972 CCDC174Q6PII3 467 aa22.37■■□□□ 1.17
GMDS-204ENST00000476972 BTNL9Q6UXG8 535 aa22.37■■□□□ 1.17
GMDS-204ENST00000476972 ANKRD35Q8N283 1001 aa22.37■■□□□ 1.17
GMDS-204ENST00000476972 ZSCAN10Q96SZ4 725 aaPredicted RBP22.37■■□□□ 1.17
GMDS-204ENST00000476972 GPCPD1Q9NPB8 672 aa22.37■■□□□ 1.17
GMDS-204ENST00000476972 STARD7Q9NQZ5 370 aa22.37■■□□□ 1.17
GMDS-204ENST00000476972 ZSWIM5Q9P217 1185 aa22.37■■□□□ 1.17
GMDS-204ENST00000476972 FBXO40Q9UH90 709 aa22.37■■□□□ 1.17
GMDS-204ENST00000476972 U3KPZ7 1027 aaPredicted RBP22.37■■□□□ 1.17
GMDS-204ENST00000476972 TNKSO95271 1327 aa22.36■■□□□ 1.17
GMDS-204ENST00000476972 SNHG28P0DPA3 235 aa22.36■■□□□ 1.17
GMDS-204ENST00000476972 ZNF543Q08ER8 600 aa22.36■■□□□ 1.17
GMDS-204ENST00000476972 FAAP100Q0VG06 881 aa22.36■■□□□ 1.17
GMDS-204ENST00000476972 ACVR2BQ13705 512 aa22.36■■□□□ 1.17
GMDS-204ENST00000476972 CCDC178Q5BJE1 867 aa22.36■■□□□ 1.17
GMDS-204ENST00000476972 SYDE2Q5VT97 1194 aa22.36■■□□□ 1.17
GMDS-204ENST00000476972 CCSAPQ6IQ19 270 aaPredicted RBP22.36■■□□□ 1.17
GMDS-204ENST00000476972 ANKRD33Q7Z3H0 272 aa22.36■■□□□ 1.17
GMDS-204ENST00000476972 ZNF467Q7Z7K2 595 aaPredicted RBP22.36■■□□□ 1.17
GMDS-204ENST00000476972 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.36■■□□□ 1.17
GMDS-204ENST00000476972 ENAHQ8N8S7 591 aaPredicted RBP22.36■■□□□ 1.17
GMDS-204ENST00000476972 NUP133Q8WUM0 1156 aa22.36■■□□□ 1.17
GMDS-204ENST00000476972 RANBP17Q9H2T7 1088 aaKnown RBP22.36■■□□□ 1.17
GMDS-204ENST00000476972 RNF146Q9NTX7 359 aa22.36■■□□□ 1.17
GMDS-204ENST00000476972 MOXD2PA6NHM9 499 aa22.35■■□□□ 1.17
GMDS-204ENST00000476972 DUSP11O75319 330 aaKnown RBP22.35■■□□□ 1.17
GMDS-204ENST00000476972 IRX5P78411 483 aaPredicted RBP22.35■■□□□ 1.17
GMDS-204ENST00000476972 BMP2KLQ5H9B9 411 aa22.35■■□□□ 1.17
GMDS-204ENST00000476972 PNMA1Q8ND90 353 aa22.35■■□□□ 1.17
GMDS-204ENST00000476972 CCDC136Q96JN2 1154 aa22.35■■□□□ 1.17
GMDS-204ENST00000476972 TOX2Q96NM4 488 aa22.35■■□□□ 1.17
GMDS-204ENST00000476972 TTYH1Q9H313 450 aaPredicted RBP22.35■■□□□ 1.17
GMDS-204ENST00000476972 ACAD9Q9H845 621 aa22.35■■□□□ 1.17
GMDS-204ENST00000476972 KAT14Q9H8E8 782 aa22.35■■□□□ 1.17
GMDS-204ENST00000476972 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.35■■□□□ 1.17
GMDS-204ENST00000476972 TAF6LQ9Y6J9 622 aa22.35■■□□□ 1.17
GMDS-204ENST00000476972 MYADML2A6NDP7 307 aa22.34■■□□□ 1.17
GMDS-204ENST00000476972 DCDC2CA8MYV0 355 aa22.34■■□□□ 1.17
GMDS-204ENST00000476972 ALAS1P13196 640 aa22.34■■□□□ 1.17
GMDS-204ENST00000476972 TKFCQ3LXA3 575 aa22.34■■□□□ 1.17
GMDS-204ENST00000476972 ANKS1AQ92625 1134 aa22.34■■□□□ 1.17
GMDS-204ENST00000476972 FGD4Q96M96 766 aa22.34■■□□□ 1.17
GMDS-204ENST00000476972 UBAC1Q9BSL1 405 aa22.34■■□□□ 1.17
GMDS-204ENST00000476972 CCPG1Q9ULG6 757 aa22.34■■□□□ 1.17
GMDS-204ENST00000476972 ICAM1P05362 532 aa22.33■■□□□ 1.17
GMDS-204ENST00000476972 FPGSQ05932 587 aa22.33■■□□□ 1.17
GMDS-204ENST00000476972 CYB5R4Q7L1T6 521 aa22.33■■□□□ 1.17
GMDS-204ENST00000476972 MAP4K1Q92918 833 aa22.33■■□□□ 1.17
GMDS-204ENST00000476972 RNPC3Q96LT9 517 aaKnown RBP22.33■■□□□ 1.17
GMDS-204ENST00000476972 TRERF1Q96PN7 1200 aa22.33■■□□□ 1.17
GMDS-204ENST00000476972 ESYT1Q9BSJ8 1104 aa22.33■■□□□ 1.17
GMDS-204ENST00000476972 COL25A1Q9BXS0 654 aaPredicted RBP22.33■■□□□ 1.17
GMDS-204ENST00000476972 ABHD16BQ9H3Z7 469 aa22.33■■□□□ 1.17
GMDS-204ENST00000476972 RBM8AQ9Y5S9 174 aaKnown RBP22.33■■□□□ 1.17
GMDS-204ENST00000476972 SMCHD1A6NHR9 2005 aa22.33■■□□□ 1.16
GMDS-204ENST00000476972 LCTP09848 1927 aa22.32■■□□□ 1.16
GMDS-204ENST00000476972 ADCY6O43306 1168 aa22.32■■□□□ 1.16
GMDS-204ENST00000476972 C6orf222P0C671 652 aaPredicted RBP22.32■■□□□ 1.16
GMDS-204ENST00000476972 TRDNQ13061 729 aa22.32■■□□□ 1.16
GMDS-204ENST00000476972 CCDC144BQ3MJ40 725 aa22.32■■□□□ 1.16
GMDS-204ENST00000476972 GPATCH4Q5T3I0 446 aaKnown RBP22.32■■□□□ 1.16
GMDS-204ENST00000476972 A1CFQ9NQ94 594 aaKnown RBP22.32■■□□□ 1.16
GMDS-204ENST00000476972 MCM3APO60318 1980 aa22.32■■□□□ 1.16
GMDS-204ENST00000476972 ASGR1P07306 291 aa22.31■■□□□ 1.16
GMDS-204ENST00000476972 GOLGA8HP0CJ92 632 aa22.31■■□□□ 1.16
GMDS-204ENST00000476972 CNTN2Q02246 1040 aa22.31■■□□□ 1.16
GMDS-204ENST00000476972 MUM1L1Q5H9M0 696 aa22.31■■□□□ 1.16
GMDS-204ENST00000476972 STOX1Q6ZVD7 989 aa22.31■■□□□ 1.16
GMDS-204ENST00000476972 ARMCX2Q7L311 632 aa22.31■■□□□ 1.16
GMDS-204ENST00000476972 CCDC144CPQ8IYA2 1237 aa22.31■■□□□ 1.16
GMDS-204ENST00000476972 MYLIPQ8WY64 445 aa22.31■■□□□ 1.16
GMDS-204ENST00000476972 VTI1AQ96AJ9 217 aa22.31■■□□□ 1.16
GMDS-204ENST00000476972 GLT1D1Q96MS3 346 aa22.31■■□□□ 1.16
GMDS-204ENST00000476972 LSG1Q9H089 658 aaKnown RBP22.31■■□□□ 1.16
GMDS-204ENST00000476972 ELP1O95163 1332 aa22.31■■□□□ 1.16
GMDS-204ENST00000476972 E7EWF7 191 aa22.3■■□□□ 1.16
GMDS-204ENST00000476972 TIMP1P01033 207 aa22.3■■□□□ 1.16
GMDS-204ENST00000476972 NEFLP07196 543 aa22.3■■□□□ 1.16
GMDS-204ENST00000476972 CST5P28325 142 aaPredicted RBP22.3■■□□□ 1.16
GMDS-204ENST00000476972 CDK7P50613 346 aa22.3■■□□□ 1.16
GMDS-204ENST00000476972 GJA9P57773 515 aa22.3■■□□□ 1.16
GMDS-204ENST00000476972 SEC23AQ15436 765 aa22.3■■□□□ 1.16
GMDS-204ENST00000476972 IFIT1BQ5T764 474 aaKnown RBP22.3■■□□□ 1.16
GMDS-204ENST00000476972 KIAA1211Q6ZU35 1233 aa22.3■■□□□ 1.16
GMDS-204ENST00000476972 PCSK9Q8NBP7 692 aaKnown RBP22.3■■□□□ 1.16
GMDS-204ENST00000476972 MAFAQ8NHW3 353 aaPredicted RBP22.3■■□□□ 1.16
GMDS-204ENST00000476972 CPVLQ9H3G5 476 aa22.3■■□□□ 1.16
GMDS-204ENST00000476972 SPC25Q9HBM1 224 aa22.3■■□□□ 1.16
GMDS-204ENST00000476972 LRRC37A2A6NM11 1700 aa22.3■■□□□ 1.16
GMDS-204ENST00000476972 LTBP2Q14767 1821 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms