RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 LMCD1Q9NZU5 365 aa18.53■□□□□ 0.56
SMG5-204ENST00000476954 SIP14410 1827 aa18.53■□□□□ 0.56
SMG5-204ENST00000476954 TECTAO75443 2155 aa18.52■□□□□ 0.56
SMG5-204ENST00000476954 SOWAHBA6NEL2 793 aa18.52■□□□□ 0.56
SMG5-204ENST00000476954 H3BQ06 376 aaPredicted RBP18.52■□□□□ 0.56
SMG5-204ENST00000476954 PDE6AP16499 860 aa18.52■□□□□ 0.56
SMG5-204ENST00000476954 POLA2Q14181 598 aa18.52■□□□□ 0.56
SMG5-204ENST00000476954 CCDC17Q96LX7 622 aa18.52■□□□□ 0.56
SMG5-204ENST00000476954 ARMT1Q9H993 441 aa18.52■□□□□ 0.56
SMG5-204ENST00000476954 KANSL2Q9H9L4 492 aa18.52■□□□□ 0.56
SMG5-204ENST00000476954 HOMER2Q9NSB8 354 aa18.52■□□□□ 0.56
SMG5-204ENST00000476954 GREB1LQ9C091 1923 aaPredicted RBP18.51■□□□□ 0.55
SMG5-204ENST00000476954 ATP2A1O14983 1001 aa18.51■□□□□ 0.55
SMG5-204ENST00000476954 SURF6O75683 361 aaKnown RBP18.51■□□□□ 0.55
SMG5-204ENST00000476954 BCAR3O75815 825 aa18.51■□□□□ 0.55
SMG5-204ENST00000476954 SLFNL1Q499Z3 407 aa18.51■□□□□ 0.55
SMG5-204ENST00000476954 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.51■□□□□ 0.55
SMG5-204ENST00000476954 EEPD1Q7L9B9 569 aa18.51■□□□□ 0.55
SMG5-204ENST00000476954 FAM133AQ8N9E0 248 aa18.51■□□□□ 0.55
SMG5-204ENST00000476954 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.51■□□□□ 0.55
SMG5-204ENST00000476954 SEZ6LQ9BYH1 1024 aa18.51■□□□□ 0.55
SMG5-204ENST00000476954 ZNF532Q9HCE3 1301 aa18.5■□□□□ 0.55
SMG5-204ENST00000476954 TRIOO75962 3097 aa18.5■□□□□ 0.55
SMG5-204ENST00000476954 ST18O60284 1047 aa18.5■□□□□ 0.55
SMG5-204ENST00000476954 ZEB2O60315 1214 aa18.5■□□□□ 0.55
SMG5-204ENST00000476954 IQCF3P0C7M6 154 aa18.5■□□□□ 0.55
SMG5-204ENST00000476954 SLC9C2Q5TAH2 1124 aa18.5■□□□□ 0.55
SMG5-204ENST00000476954 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.5■□□□□ 0.55
SMG5-204ENST00000476954 KIFC2Q96AC6 838 aa18.5■□□□□ 0.55
SMG5-204ENST00000476954 LCTP09848 1927 aa18.49■□□□□ 0.55
SMG5-204ENST00000476954 ZBED4O75132 1171 aa18.49■□□□□ 0.55
SMG5-204ENST00000476954 NDUFB10O96000 172 aa18.49■□□□□ 0.55
SMG5-204ENST00000476954 SUPT20HL2P0C7V6 817 aa18.49■□□□□ 0.55
SMG5-204ENST00000476954 RFC2P35250 354 aa18.49■□□□□ 0.55
SMG5-204ENST00000476954 DEFB103AP81534 67 aa18.49■□□□□ 0.55
SMG5-204ENST00000476954 ZP2Q05996 745 aa18.49■□□□□ 0.55
SMG5-204ENST00000476954 TAPT1Q6NXT6 567 aa18.49■□□□□ 0.55
SMG5-204ENST00000476954 FBXO16Q8IX29 292 aaPredicted RBP18.49■□□□□ 0.55
SMG5-204ENST00000476954 PRPF38AQ8NAV1 312 aaKnown RBP18.49■□□□□ 0.55
SMG5-204ENST00000476954 USP34Q70CQ2 3546 aa18.48■□□□□ 0.55
SMG5-204ENST00000476954 MYO7AQ13402 2215 aa18.48■□□□□ 0.55
SMG5-204ENST00000476954 CFAP54Q96N23 3096 aa18.48■□□□□ 0.55
SMG5-204ENST00000476954 TCRBV5S4A2TA0A5A2 114 aa18.48■□□□□ 0.55
SMG5-204ENST00000476954 ERVK-21P61565 698 aa18.48■□□□□ 0.55
SMG5-204ENST00000476954 WDR5P61964 334 aaKnown RBP18.48■□□□□ 0.55
SMG5-204ENST00000476954 IER5LQ5T953 404 aa18.48■□□□□ 0.55
SMG5-204ENST00000476954 C12orf60Q5U649 245 aa18.48■□□□□ 0.55
SMG5-204ENST00000476954 C16orf86Q6ZW13 317 aa18.48■□□□□ 0.55
SMG5-204ENST00000476954 CHST13Q8NET6 341 aa18.48■□□□□ 0.55
SMG5-204ENST00000476954 NEK9Q8TD19 979 aa18.48■□□□□ 0.55
SMG5-204ENST00000476954 ZBED2Q9BTP6 218 aa18.48■□□□□ 0.55
SMG5-204ENST00000476954 SLC38A10Q9HBR0 1119 aa18.48■□□□□ 0.55
SMG5-204ENST00000476954 CTDP1Q9Y5B0 961 aaPredicted RBP18.48■□□□□ 0.55
SMG5-204ENST00000476954 MYH4Q9Y623 1939 aa18.48■□□□□ 0.55
SMG5-204ENST00000476954 SCN10AQ9Y5Y9 1956 aa18.48■□□□□ 0.55
SMG5-204ENST00000476954 USP17L12C9JPN9 530 aa18.47■□□□□ 0.55
SMG5-204ENST00000476954 USP17L21D6R901 530 aa18.47■□□□□ 0.55
SMG5-204ENST00000476954 F5H6K3 240 aa18.47■□□□□ 0.55
SMG5-204ENST00000476954 MYL3P08590 195 aa18.47■□□□□ 0.55
SMG5-204ENST00000476954 KCNJ6P48051 423 aa18.47■□□□□ 0.55
SMG5-204ENST00000476954 KLRC3Q07444 240 aa18.47■□□□□ 0.55
SMG5-204ENST00000476954 TCTN1Q2MV58 587 aa18.47■□□□□ 0.55
SMG5-204ENST00000476954 FAM47CQ5HY64 1035 aa18.47■□□□□ 0.55
SMG5-204ENST00000476954 TMED8Q6PL24 325 aaPredicted RBP18.47■□□□□ 0.55
SMG5-204ENST00000476954 SSH3Q8TE77 659 aa18.47■□□□□ 0.55
SMG5-204ENST00000476954 A1CFQ9NQ94 594 aaKnown RBP18.47■□□□□ 0.55
SMG5-204ENST00000476954 FBXO40Q9UH90 709 aa18.47■□□□□ 0.55
SMG5-204ENST00000476954 CACNA1HO95180 2353 aa18.47■□□□□ 0.55
SMG5-204ENST00000476954 LINC01553A4QN01 128 aa18.46■□□□□ 0.55
SMG5-204ENST00000476954 C19orf67A6NJJ6 358 aa18.46■□□□□ 0.55
SMG5-204ENST00000476954 IRS1P35568 1242 aa18.46■□□□□ 0.55
SMG5-204ENST00000476954 PURAQ00577 322 aaKnown RBP18.46■□□□□ 0.55
SMG5-204ENST00000476954 GPNMBQ14956 572 aa18.46■□□□□ 0.55
SMG5-204ENST00000476954 RETREG2Q8NC44 543 aa18.46■□□□□ 0.55
SMG5-204ENST00000476954 MFSD14AQ96MC6 490 aa18.46■□□□□ 0.55
SMG5-204ENST00000476954 TGS1Q96RS0 853 aaKnown RBP18.46■□□□□ 0.55
SMG5-204ENST00000476954 BAIAP3O94812 1187 aa18.45■□□□□ 0.54
SMG5-204ENST00000476954 NBPF20Q3BBV1 942 aa18.45■□□□□ 0.54
SMG5-204ENST00000476954 IQSEC1Q6DN90 963 aa18.45■□□□□ 0.54
SMG5-204ENST00000476954 FAM117BQ6P1L5 589 aa18.45■□□□□ 0.54
SMG5-204ENST00000476954 PURBQ96QR8 312 aaKnown RBP18.45■□□□□ 0.54
SMG5-204ENST00000476954 C1orf115Q9H7X2 142 aa18.45■□□□□ 0.54
SMG5-204ENST00000476954 PTPRZ1P23471 2315 aaPredicted RBP18.45■□□□□ 0.54
SMG5-204ENST00000476954 ASB14A6NK59 587 aa18.44■□□□□ 0.54
SMG5-204ENST00000476954 PITPNM1O00562 1244 aa18.44■□□□□ 0.54
SMG5-204ENST00000476954 MBD4O95243 580 aa18.44■□□□□ 0.54
SMG5-204ENST00000476954 CHGBP05060 677 aa18.44■□□□□ 0.54
SMG5-204ENST00000476954 ATP8B2P98198 1209 aa18.44■□□□□ 0.54
SMG5-204ENST00000476954 KIAA1211Q6ZU35 1233 aa18.44■□□□□ 0.54
SMG5-204ENST00000476954 TRMT2AQ8IZ69 625 aaKnown RBP18.44■□□□□ 0.54
SMG5-204ENST00000476954 ARHGAP45Q92619 1136 aa18.44■□□□□ 0.54
SMG5-204ENST00000476954 C17orf80Q9BSJ5 609 aa18.44■□□□□ 0.54
SMG5-204ENST00000476954 FAM86C1Q9NVL1 165 aa18.44■□□□□ 0.54
SMG5-204ENST00000476954 MUTYHQ9UIF7 546 aa18.44■□□□□ 0.54
SMG5-204ENST00000476954 Q9Y3F1 56 aa18.44■□□□□ 0.54
SMG5-204ENST00000476954 RARSP54136 660 aaKnown RBP18.43■□□□□ 0.54
SMG5-204ENST00000476954 TCF15Q12870 199 aa18.43■□□□□ 0.54
SMG5-204ENST00000476954 PUS10Q3MIT2 529 aaKnown RBP18.43■□□□□ 0.54
SMG5-204ENST00000476954 EP400NLQ6ZTU2 488 aa18.43■□□□□ 0.54
SMG5-204ENST00000476954 STK11IPQ8N1F8 1099 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms