RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 R3HDMLQ9H3Y0 253 aa9.76□□□□□ -0.85
CHD6-207ENST00000476641 RNF112Q9ULX5 631 aa9.76□□□□□ -0.85
CHD6-207ENST00000476641 DAGLAQ9Y4D2 1042 aa9.76□□□□□ -0.85
CHD6-207ENST00000476641 TBC1D8O95759 1140 aa9.75□□□□□ -0.85
CHD6-207ENST00000476641 NOS3P29474 1203 aa9.75□□□□□ -0.85
CHD6-207ENST00000476641 ATP8B2P98198 1209 aa9.75□□□□□ -0.85
CHD6-207ENST00000476641 IER5Q5VY09 327 aa9.75□□□□□ -0.85
CHD6-207ENST00000476641 ZFPM1Q8IX07 1006 aa9.75□□□□□ -0.85
CHD6-207ENST00000476641 STAG2Q8N3U4 1231 aa9.75□□□□□ -0.85
CHD6-207ENST00000476641 WDR66Q8TBY9 1149 aa9.75□□□□□ -0.85
CHD6-207ENST00000476641 ADAMTS19Q8TE59 1207 aa9.75□□□□□ -0.85
CHD6-207ENST00000476641 ZNF384Q8TF68 577 aa9.75□□□□□ -0.85
CHD6-207ENST00000476641 POM121Q96HA1 1249 aa9.75□□□□□ -0.85
CHD6-207ENST00000476641 NEUROD6Q96NK8 337 aa9.75□□□□□ -0.85
CHD6-207ENST00000476641 TLR7Q9NYK1 1049 aaKnown RBP9.75□□□□□ -0.85
CHD6-207ENST00000476641 HDAC5Q9UQL6 1122 aa9.75□□□□□ -0.85
CHD6-207ENST00000476641 PPP2R3BQ9Y5P8 575 aa9.75□□□□□ -0.85
CHD6-207ENST00000476641 POM121CA8CG34 1229 aa9.74□□□□□ -0.85
CHD6-207ENST00000476641 HDLBPQ00341 1268 aaKnown RBP9.74□□□□□ -0.85
CHD6-207ENST00000476641 TCP10Q12799 353 aa9.74□□□□□ -0.85
CHD6-207ENST00000476641 G3BP1Q13283 466 aaKnown RBP eCLIP9.74□□□□□ -0.85
CHD6-207ENST00000476641 C20orf194Q5TEA3 1177 aa9.74□□□□□ -0.85
CHD6-207ENST00000476641 CDC42EP5Q6NZY7 148 aa9.74□□□□□ -0.85
CHD6-207ENST00000476641 CEP85Q6P2H3 762 aa9.74□□□□□ -0.85
CHD6-207ENST00000476641 KRTAP19-1Q8IUB9 90 aa9.74□□□□□ -0.85
CHD6-207ENST00000476641 SSH3Q8TE77 659 aa9.74□□□□□ -0.85
CHD6-207ENST00000476641 SCG3Q8WXD2 468 aaKnown RBP9.74□□□□□ -0.85
CHD6-207ENST00000476641 WNK4Q96J92 1243 aa9.74□□□□□ -0.85
CHD6-207ENST00000476641 UCN2Q96RP3 112 aa9.74□□□□□ -0.85
CHD6-207ENST00000476641 DBNDD2Q9BQY9 259 aa9.74□□□□□ -0.85
CHD6-207ENST00000476641 ELP3Q9H9T3 547 aa9.74□□□□□ -0.85
CHD6-207ENST00000476641 GNL3LQ9NVN8 582 aaKnown RBP9.74□□□□□ -0.85
CHD6-207ENST00000476641 HMG20BQ9P0W2 317 aa9.74□□□□□ -0.85
CHD6-207ENST00000476641 ABCF2Q9UG63 623 aa9.74□□□□□ -0.85
CHD6-207ENST00000476641 CASP8AP2Q9UKL3 1982 aa9.74□□□□□ -0.85
CHD6-207ENST00000476641 ARAP2Q8WZ64 1704 aa9.73□□□□□ -0.85
CHD6-207ENST00000476641 CA12O43570 354 aa9.73□□□□□ -0.85
CHD6-207ENST00000476641 ATP9BO43861 1147 aa9.73□□□□□ -0.85
CHD6-207ENST00000476641 SURF6O75683 361 aaKnown RBP9.73□□□□□ -0.85
CHD6-207ENST00000476641 LDHBP07195 334 aaKnown RBP9.73□□□□□ -0.85
CHD6-207ENST00000476641 VGLL4Q14135 290 aa9.73□□□□□ -0.85
CHD6-207ENST00000476641 PCSK7Q16549 785 aa9.73□□□□□ -0.85
CHD6-207ENST00000476641 MAP3K11Q16584 847 aa9.73□□□□□ -0.85
CHD6-207ENST00000476641 SUPT20HL1Q3ZLR7 823 aa9.73□□□□□ -0.85
CHD6-207ENST00000476641 HHIPL2Q6UWX4 724 aa9.73□□□□□ -0.85
CHD6-207ENST00000476641 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.73□□□□□ -0.85
CHD6-207ENST00000476641 MIGA2Q7L4E1 593 aa9.73□□□□□ -0.85
CHD6-207ENST00000476641 ABHD8Q96I13 439 aa9.73□□□□□ -0.85
CHD6-207ENST00000476641 LPIN3Q9BQK8 851 aa9.73□□□□□ -0.85
CHD6-207ENST00000476641 GOLGA2P5Q9HBQ8 144 aa9.73□□□□□ -0.85
CHD6-207ENST00000476641 DENND2AQ9ULE3 1009 aa9.73□□□□□ -0.85
CHD6-207ENST00000476641 SUGT1Q9Y2Z0 365 aa9.73□□□□□ -0.85
CHD6-207ENST00000476641 TGFBR3LH3BV60 316 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 IGF2BP3O00425 579 aaKnown RBP eCLIP9.72□□□□□ -0.85
CHD6-207ENST00000476641 DKK1O94907 266 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 MCAMP43121 646 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 OS9Q13438 667 aaPredicted RBP9.72□□□□□ -0.85
CHD6-207ENST00000476641 TNFAIP1Q13829 316 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 MVPQ14764 893 aaKnown RBP9.72□□□□□ -0.85
CHD6-207ENST00000476641 RTN1Q16799 776 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 TNNI3KQ59H18 835 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 WFDC8Q8IUA0 241 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 MEGF10Q96KG7 1140 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 MRIQ9BWK5 157 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 MCOLN1Q9GZU1 580 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 USP40Q9NVE5 1235 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 FRRS1LQ9P0K9 344 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 RCAN3Q9UKA8 241 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 EXOC6BQ9Y2D4 811 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 AKAP2Q9Y2D5 859 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 FPGT-TNNI3KV9GXZ4 949 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 MAST3O60307 1309 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 SALL1Q9NSC2 1324 aa9.72□□□□□ -0.85
CHD6-207ENST00000476641 TM4SF4P48230 202 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 MECOMQ03112 1051 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 PLAURQ03405 335 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 DGKZQ13574 1117 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 PERM1Q5SV97 790 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 GORABQ5T7V8 394 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 DZIP1Q86YF9 867 aaKnown RBP9.71□□□□□ -0.86
CHD6-207ENST00000476641 SIRT2Q8IXJ6 389 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 SPATA5Q8NB90 893 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.71□□□□□ -0.86
CHD6-207ENST00000476641 ZKSCAN4Q969J2 545 aaPredicted RBP9.71□□□□□ -0.86
CHD6-207ENST00000476641 OPTNQ96CV9 577 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 PTPN18Q99952 460 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 KRTAP9-9Q9BYP9 154 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 KRTAP9-4Q9BYQ2 154 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 CCDC8Q9H0W5 538 aaPredicted RBP9.71□□□□□ -0.86
CHD6-207ENST00000476641 BCL11AQ9H165 835 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 DDX4Q9NQI0 724 aaKnown RBP9.71□□□□□ -0.86
CHD6-207ENST00000476641 SAGE1Q9NXZ1 904 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 TMOD2Q9NZR1 351 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 DBNLQ9UJU6 430 aaKnown RBP9.71□□□□□ -0.86
CHD6-207ENST00000476641 NOP58Q9Y2X3 529 aaKnown RBP9.71□□□□□ -0.86
CHD6-207ENST00000476641 GAKO14976 1311 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 HTTP42858 3142 aa9.71□□□□□ -0.86
CHD6-207ENST00000476641 RAD21O60216 631 aa9.7□□□□□ -0.86
CHD6-207ENST00000476641 MAP3K6O95382 1288 aa9.7□□□□□ -0.86
CHD6-207ENST00000476641 EPB42P16452 691 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms