RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 ABCB11O95342 1321 aa11.91□□□□□ -0.5
CCM2-208ENST00000476594 FRMPD3Q5JV73 1810 aa11.91□□□□□ -0.5
CCM2-208ENST00000476594 E7EWF7 191 aa11.91□□□□□ -0.5
CCM2-208ENST00000476594 DUSP11O75319 330 aaKnown RBP11.91□□□□□ -0.5
CCM2-208ENST00000476594 CDC45O75419 566 aa11.91□□□□□ -0.5
CCM2-208ENST00000476594 ZNF865P0CJ78 1059 aaPredicted RBP11.91□□□□□ -0.5
CCM2-208ENST00000476594 GOLGA8HP0CJ92 632 aa11.91□□□□□ -0.5
CCM2-208ENST00000476594 MNX1P50219 401 aaPredicted RBP11.91□□□□□ -0.5
CCM2-208ENST00000476594 LRRC41Q15345 812 aa11.91□□□□□ -0.5
CCM2-208ENST00000476594 CDC37Q16543 378 aaPredicted RBP11.91□□□□□ -0.5
CCM2-208ENST00000476594 GJC2Q5T442 439 aaPredicted RBP11.91□□□□□ -0.5
CCM2-208ENST00000476594 ANO1Q5XXA6 986 aa11.91□□□□□ -0.5
CCM2-208ENST00000476594 RNF207Q6ZRF8 634 aa11.91□□□□□ -0.5
CCM2-208ENST00000476594 CATIPQ7Z7H3 387 aa11.91□□□□□ -0.5
CCM2-208ENST00000476594 MCF2L2Q86YR7 1114 aa11.91□□□□□ -0.5
CCM2-208ENST00000476594 TMTC2Q8N394 836 aa11.91□□□□□ -0.5
CCM2-208ENST00000476594 FAM133AQ8N9E0 248 aa11.91□□□□□ -0.5
CCM2-208ENST00000476594 NUP133Q8WUM0 1156 aa11.91□□□□□ -0.5
CCM2-208ENST00000476594 TSEN34Q9BSV6 310 aaKnown RBP11.91□□□□□ -0.5
CCM2-208ENST00000476594 A0A1W2PPC1 479 aa11.9□□□□□ -0.5
CCM2-208ENST00000476594 MOXD2PA6NHM9 499 aa11.9□□□□□ -0.5
CCM2-208ENST00000476594 SNAI1O95863 264 aaPredicted RBP11.9□□□□□ -0.5
CCM2-208ENST00000476594 MCM5P33992 734 aa11.9□□□□□ -0.5
CCM2-208ENST00000476594 SNAP25P60880 206 aa11.9□□□□□ -0.5
CCM2-208ENST00000476594 MUM1L1Q5H9M0 696 aa11.9□□□□□ -0.5
CCM2-208ENST00000476594 TMEM67Q5HYA8 995 aa11.9□□□□□ -0.5
CCM2-208ENST00000476594 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
CCM2-208ENST00000476594 NOL8Q76FK4 1167 aaKnown RBP11.9□□□□□ -0.5
CCM2-208ENST00000476594 FBXO11Q86XK2 927 aa11.9□□□□□ -0.5
CCM2-208ENST00000476594 CCDC144CPQ8IYA2 1237 aa11.9□□□□□ -0.5
CCM2-208ENST00000476594 PCSK9Q8NBP7 692 aaKnown RBP11.9□□□□□ -0.5
CCM2-208ENST00000476594 DNERQ8NFT8 737 aa11.9□□□□□ -0.5
CCM2-208ENST00000476594 VTA1Q9NP79 307 aa11.9□□□□□ -0.5
CCM2-208ENST00000476594 MRPL11Q9Y3B7 192 aaKnown RBP11.9□□□□□ -0.5
CCM2-208ENST00000476594 KLRF2D3W0D1 207 aa11.89□□□□□ -0.51
CCM2-208ENST00000476594 ZEB2O60315 1214 aa11.89□□□□□ -0.51
CCM2-208ENST00000476594 KIF5BP33176 963 aa11.89□□□□□ -0.51
CCM2-208ENST00000476594 CNTN2Q02246 1040 aa11.89□□□□□ -0.51
CCM2-208ENST00000476594 SEC23AQ15436 765 aa11.89□□□□□ -0.51
CCM2-208ENST00000476594 CCDC144BQ3MJ40 725 aa11.89□□□□□ -0.51
CCM2-208ENST00000476594 USH1GQ495M9 461 aa11.89□□□□□ -0.51
CCM2-208ENST00000476594 HABP4Q5JVS0 413 aaKnown RBP11.89□□□□□ -0.51
CCM2-208ENST00000476594 ERICH6BQ5W0A0 696 aa11.89□□□□□ -0.51
CCM2-208ENST00000476594 CYB5R4Q7L1T6 521 aa11.89□□□□□ -0.51
CCM2-208ENST00000476594 ADGRF4Q8IZF3 695 aa11.89□□□□□ -0.51
CCM2-208ENST00000476594 RGS22Q8NE09 1264 aa11.89□□□□□ -0.51
CCM2-208ENST00000476594 CTCFLQ8NI51 663 aaPredicted RBP11.89□□□□□ -0.51
CCM2-208ENST00000476594 TMEM87BQ96K49 555 aa11.89□□□□□ -0.51
CCM2-208ENST00000476594 UBA5Q9GZZ9 404 aa11.89□□□□□ -0.51
CCM2-208ENST00000476594 CCDC69A6NI79 296 aa11.88□□□□□ -0.51
CCM2-208ENST00000476594 NFIBO00712 420 aa11.88□□□□□ -0.51
CCM2-208ENST00000476594 DDAH1O94760 285 aa11.88□□□□□ -0.51
CCM2-208ENST00000476594 PGK1P00558 417 aa11.88□□□□□ -0.51
CCM2-208ENST00000476594 C6orf222P0C671 652 aaPredicted RBP11.88□□□□□ -0.51
CCM2-208ENST00000476594 TAL1P17542 331 aaPredicted RBP11.88□□□□□ -0.51
CCM2-208ENST00000476594 CALML3P27482 149 aa11.88□□□□□ -0.51
CCM2-208ENST00000476594 ALDH5A1P51649 535 aaPredicted RBP11.88□□□□□ -0.51
CCM2-208ENST00000476594 ATN1P54259 1190 aaPredicted RBP11.88□□□□□ -0.51
CCM2-208ENST00000476594 PDE4DQ08499 809 aa11.88□□□□□ -0.51
CCM2-208ENST00000476594 BAATQ14032 418 aaPredicted RBP11.88□□□□□ -0.51
CCM2-208ENST00000476594 KRT32Q14532 448 aa11.88□□□□□ -0.51
CCM2-208ENST00000476594 LRRC26Q2I0M4 334 aa11.88□□□□□ -0.51
CCM2-208ENST00000476594 BRDTQ58F21 947 aaPredicted RBP11.88□□□□□ -0.51
CCM2-208ENST00000476594 NFXL1Q6ZNB6 911 aa11.88□□□□□ -0.51
CCM2-208ENST00000476594 SAMD3Q8N6K7 520 aa11.88□□□□□ -0.51
CCM2-208ENST00000476594 GLT1D1Q96MS3 346 aa11.88□□□□□ -0.51
CCM2-208ENST00000476594 LBHD1Q9BQE6 289 aaPredicted RBP11.88□□□□□ -0.51
CCM2-208ENST00000476594 AMNQ9BXJ7 453 aa11.88□□□□□ -0.51
CCM2-208ENST00000476594 LSG1Q9H089 658 aaKnown RBP11.88□□□□□ -0.51
CCM2-208ENST00000476594 AP5M1Q9H0R1 490 aa11.88□□□□□ -0.51
CCM2-208ENST00000476594 MAP3K20Q9NYL2 800 aaKnown RBP11.88□□□□□ -0.51
CCM2-208ENST00000476594 PHF24Q9UPV7 400 aa11.88□□□□□ -0.51
CCM2-208ENST00000476594 COLQQ9Y215 455 aaPredicted RBP11.88□□□□□ -0.51
CCM2-208ENST00000476594 MROH7Q68CQ1 1323 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 SYNRGQ9UMZ2 1314 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 SOWAHBA6NEL2 793 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 ZBTB5O15062 677 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 CALM1P0DP23 149 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 CALM2P0DP24 149 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 CALM3P0DP25 149 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 CST5P28325 142 aaPredicted RBP11.87□□□□□ -0.51
CCM2-208ENST00000476594 ADCYAP1R1P41586 468 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 GNAQP50148 359 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 GJA9P57773 515 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 RTP1P59025 263 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 RPS6P62753 249 aaKnown RBP11.87□□□□□ -0.51
CCM2-208ENST00000476594 TNFAIP2Q03169 654 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 GRM4Q14833 912 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 QRICH1Q2TAL8 776 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 C1orf53Q5VUE5 145 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 CREB3L3Q68CJ9 461 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 IQSEC1Q6DN90 963 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 SLC39A5Q6ZMH5 540 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 SYNE3Q6ZMZ3 975 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 MB21D2Q8IYB1 491 aaPredicted RBP11.87□□□□□ -0.51
CCM2-208ENST00000476594 FGD4Q96M96 766 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 MAP3K14Q99558 947 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 LZTS2Q9BRK4 669 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 SEZ6LQ9BYH1 1024 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 VAT1LQ9HCJ6 419 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms