RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 GNAT3A8MTJ3 354 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 PRR33A8MZF0 331 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 HMGB1P1B2RPK0 211 aaPredicted RBP5.46□□□□□ -1.54
VPS13D-207ENST00000476169 STXBP3O00186 592 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 SCG5P05408 212 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 CD3EP07766 207 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 ADMP35318 185 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 TNK2Q07912 1038 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 SCRN1Q12765 414 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 NTRK3Q16288 839 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 CYP27C1Q4G0S4 372 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 SLC35F1Q5T1Q4 408 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 OGFOD3Q6PK18 319 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 CRTC3Q6UUV7 619 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 C22orf34Q6ZV56 151 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 MAMDC2Q7Z304 686 aaPredicted RBP5.46□□□□□ -1.54
VPS13D-207ENST00000476169 ZAR1Q86SH2 424 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 PPM1KQ8N3J5 372 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 MFSD4AQ8N468 514 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 GSTCDQ8NEC7 633 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 PIWIL2Q8TC59 973 aaKnown RBP5.46□□□□□ -1.54
VPS13D-207ENST00000476169 UBE2Q2Q8WVN8 375 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 C1orf159Q96HA4 380 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 HEXIM2Q96MH2 286 aaKnown RBP5.46□□□□□ -1.54
VPS13D-207ENST00000476169 TNPO3Q9Y5L0 923 aaKnown RBP5.46□□□□□ -1.54
VPS13D-207ENST00000476169 CAPN6Q9Y6Q1 641 aa5.46□□□□□ -1.54
VPS13D-207ENST00000476169 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-207ENST00000476169 SHISA3A0PJX4 238 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 HMX2A2RU54 273 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 FAM155AB1AL88 458 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-207ENST00000476169 IGF2BP3O00425 579 aaKnown RBP eCLIP5.45□□□□□ -1.54
VPS13D-207ENST00000476169 SH3BP5O60239 455 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 OPA1O60313 960 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 KATNA1O75449 491 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 SCGB1D2O95969 90 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 ASLP04424 464 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 APPP05067 770 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 ZNF865P0CJ78 1059 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-207ENST00000476169 CPEP16870 476 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 POU3F3P20264 500 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-207ENST00000476169 INSM1Q01101 510 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-207ENST00000476169 RALBP1Q15311 655 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 LRRC41Q15345 812 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 NFE2Q16621 373 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-207ENST00000476169 FGD2Q7Z6J4 655 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 AHI1Q8N157 1196 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 ENOX1Q8TC92 643 aaKnown RBP5.45□□□□□ -1.54
VPS13D-207ENST00000476169 LEO1Q8WVC0 666 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-207ENST00000476169 DDX1Q92499 740 aaKnown RBP5.45□□□□□ -1.54
VPS13D-207ENST00000476169 GATA6Q92908 595 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 MTMR8Q96EF0 704 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 MAGEB10Q96LZ2 347 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-207ENST00000476169 SSBP4Q9BWG4 385 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-207ENST00000476169 HDAC8Q9BY41 377 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 C7orf69Q9H7B7 122 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 RNF112Q9ULX5 631 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 RAXQ9Y2V3 346 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 WASHC2CQ9Y4E1 1318 aa5.45□□□□□ -1.54
VPS13D-207ENST00000476169 SHTN1A0MZ66 631 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 MYL1P05976 194 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 IGFALSP35858 605 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 FLT3P36888 993 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 CTSKP43235 329 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 CHRNA4P43681 627 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 NOP2P46087 812 aaKnown RBP5.44□□□□□ -1.54
VPS13D-207ENST00000476169 NEK4P51957 841 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 CYP27A1Q02318 531 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 ZNF460Q14592 562 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 SYCP2LQ5T4T6 812 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 STYK1Q6J9G0 422 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 ARHGAP27Q6ZUM4 889 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 DDX46Q7L014 1031 aaKnown RBP5.44□□□□□ -1.54
VPS13D-207ENST00000476169 PPIL6Q8IXY8 311 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 MYO1HQ8N1T3 1032 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 FBXL6Q8N531 539 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 ZNF655Q8N720 491 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-207ENST00000476169 DAGLBQ8NCG7 672 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 DCAF4Q8WV16 495 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 MCMBPQ9BTE3 642 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 GPR62Q9BZJ7 368 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 GPATCH2Q9NW75 528 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 STOML1Q9UBI4 398 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 TRAF6Q9Y4K3 522 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 ST14Q9Y5Y6 855 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 BACE2Q9Y5Z0 518 aa5.44□□□□□ -1.54
VPS13D-207ENST00000476169 C2orf71A6NGG8 1288 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 FAM170BA6NMN3 283 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 AQP7O14520 342 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 AURKAO14965 403 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 MEFVO15553 781 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-207ENST00000476169 KPNA6O60684 536 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 THBDP07204 575 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 CYP4F3Q08477 520 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 ITKQ08881 620 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 DENND5AQ6IQ26 1287 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 SLC4A10Q6U841 1118 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 KCNT2Q6UVM3 1135 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 KSR2Q6VAB6 950 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 ZNF765Q7L2R6 523 aa5.43□□□□□ -1.54
VPS13D-207ENST00000476169 C14orf80Q86SX3 495 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms