RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 LAS1LQ9Y4W2 734 aaKnown RBP5.32□□□□□ -1.56
VPS13D-206ENST00000476045 MED23Q9ULK4 1368 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 COL4A1P02462 1669 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 XDHP47989 1333 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 MEGF11A6BM72 1044 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 IRS4O14654 1257 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-206ENST00000476045 APAF1O14727 1248 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 HCLS1P14317 486 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-206ENST00000476045 CTCFP49711 727 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-206ENST00000476045 RRP1P56182 461 aaKnown RBP5.31□□□□□ -1.56
VPS13D-206ENST00000476045 HTRA3P83110 453 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 MAP2K1Q02750 393 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-206ENST00000476045 OLFM4Q6UX06 510 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-206ENST00000476045 ACAD11Q709F0 780 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 CCNJLQ8IV13 435 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 GLYCTKQ8IVS8 523 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 CNTROBQ8N137 903 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 UBASH3BQ8TF42 649 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 DPF2Q92785 391 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 ALKBH8Q96BT7 664 aaKnown RBP5.31□□□□□ -1.56
VPS13D-206ENST00000476045 TCF12Q99081 682 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 CDC5LQ99459 802 aaKnown RBP5.31□□□□□ -1.56
VPS13D-206ENST00000476045 BCL2L13Q9BXK5 485 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 MYH16Q9H6N6 1097 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 LATS2Q9NRM7 1088 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 CWC25Q9NXE8 425 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-206ENST00000476045 RCAN3Q9UKA8 241 aa5.31□□□□□ -1.56
VPS13D-206ENST00000476045 ABT1Q9ULW3 272 aaKnown RBP5.31□□□□□ -1.56
VPS13D-206ENST00000476045 MYO3BQ8WXR4 1341 aa5.3□□□□□ -1.56
VPS13D-206ENST00000476045 H7C1D1 291 aa5.3□□□□□ -1.56
VPS13D-206ENST00000476045 EIF4EBP3O60516 100 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-206ENST00000476045 PDE8AO60658 829 aa5.3□□□□□ -1.56
VPS13D-206ENST00000476045 TRPA1O75762 1119 aa5.3□□□□□ -1.56
VPS13D-206ENST00000476045 FSTP19883 344 aa5.3□□□□□ -1.56
VPS13D-206ENST00000476045 GMPSP49915 693 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-206ENST00000476045 CXCL9Q07325 125 aa5.3□□□□□ -1.56
VPS13D-206ENST00000476045 KRT24Q2M2I5 525 aa5.3□□□□□ -1.56
VPS13D-206ENST00000476045 KIAA0319Q5VV43 1072 aa5.3□□□□□ -1.56
VPS13D-206ENST00000476045 ANKRD34AQ69YU3 496 aa5.3□□□□□ -1.56
VPS13D-206ENST00000476045 MYRFLQ96LU7 910 aa5.3□□□□□ -1.56
VPS13D-206ENST00000476045 METTL22Q9BUU2 404 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-206ENST00000476045 RBCK1Q9BYM8 510 aa5.3□□□□□ -1.56
VPS13D-206ENST00000476045 SUGCTQ9HAC7 445 aa5.3□□□□□ -1.56
VPS13D-206ENST00000476045 PITPNM2Q9BZ72 1349 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 A0A1W2PP55 124 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 SOX1O00570 391 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-206ENST00000476045 GPR182O15218 404 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 GSC2O15499 205 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 DDX3YO15523 660 aaKnown RBP5.29□□□□□ -1.56
VPS13D-206ENST00000476045 NDUFB5O43674 189 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 PLIN1O60240 522 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 ECE2O60344 883 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 UFL1O94874 794 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 ESRRAP11474 423 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-206ENST00000476045 GLB1P16278 677 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 MAP2K2P36507 400 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 EPS15P42566 896 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 CTSWP56202 376 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 RPS8P62241 208 aaKnown RBP5.29□□□□□ -1.56
VPS13D-206ENST00000476045 C19orf57Q0VDD7 668 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 DUOXA2Q1HG44 320 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 DEFB115Q30KQ5 88 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 MAP1SQ66K74 1059 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-206ENST00000476045 KSR2Q6VAB6 950 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 CDC37L1Q7L3B6 337 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 ANKRD18AQ8IVF6 992 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 AGBL3Q8NEM8 1001 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 FAM89AQ96GI7 184 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 CAPNS2Q96L46 248 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 MYD88Q99836 296 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 TMPRSS13Q9BYE2 586 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 RNF208Q9H0X6 261 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 PGAP2Q9UHJ9 254 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 BRPF3Q9ULD4 1205 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 HIF3AQ9Y2N7 669 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 RAXQ9Y2V3 346 aa5.29□□□□□ -1.56
VPS13D-206ENST00000476045 NOP58Q9Y2X3 529 aaKnown RBP5.29□□□□□ -1.56
VPS13D-206ENST00000476045 WDR33Q9C0J8 1336 aaKnown RBP5.28□□□□□ -1.56
VPS13D-206ENST00000476045 OTOFQ9HC10 1997 aa5.28□□□□□ -1.56
VPS13D-206ENST00000476045 CASP8AP2Q9UKL3 1982 aa5.28□□□□□ -1.56
VPS13D-206ENST00000476045 LOC100289279A0A1B0GTE1 492 aa5.28□□□□□ -1.56
VPS13D-206ENST00000476045 TIAF1O95411 115 aa5.28□□□□□ -1.56
VPS13D-206ENST00000476045 ITPKAP23677 461 aa5.28□□□□□ -1.56
VPS13D-206ENST00000476045 FKBP1BP68106 108 aa5.28□□□□□ -1.56
VPS13D-206ENST00000476045 PTPN12Q05209 780 aaKnown RBP5.28□□□□□ -1.56
VPS13D-206ENST00000476045 NOGQ13253 232 aa5.28□□□□□ -1.56
VPS13D-206ENST00000476045 KIF4BQ2VIQ3 1234 aa5.28□□□□□ -1.56
VPS13D-206ENST00000476045 TWISTNBQ3B726 338 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-206ENST00000476045 HGSNATQ68CP4 663 aa5.28□□□□□ -1.56
VPS13D-206ENST00000476045 WDR63Q8IWG1 891 aa5.28□□□□□ -1.56
VPS13D-206ENST00000476045 RGS22Q8NE09 1264 aa5.28□□□□□ -1.56
VPS13D-206ENST00000476045 TBC1D16Q8TBP0 767 aa5.28□□□□□ -1.56
VPS13D-206ENST00000476045 CELF1Q92879 486 aaKnown RBP5.28□□□□□ -1.56
VPS13D-206ENST00000476045 CRBNQ96SW2 442 aa5.28□□□□□ -1.56
VPS13D-206ENST00000476045 PLA2G12BQ9BX93 195 aa5.28□□□□□ -1.56
VPS13D-206ENST00000476045 ZC3H12CQ9C0D7 883 aaKnown RBP5.28□□□□□ -1.56
VPS13D-206ENST00000476045 DNAJC25Q9H1X3 360 aa5.28□□□□□ -1.56
VPS13D-206ENST00000476045 ZFP64Q9NPA5 681 aa5.28□□□□□ -1.56
VPS13D-206ENST00000476045 MAP3K2Q9Y2U5 619 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms