RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 ANO1Q5XXA6 986 aa13.35□□□□□ -0.27
NUDCD3-206ENST00000475952 TTBK2Q6IQ55 1244 aa13.35□□□□□ -0.27
NUDCD3-206ENST00000475952 MAMDC4Q6UXC1 1216 aa13.35□□□□□ -0.27
NUDCD3-206ENST00000475952 PNMA1Q8ND90 353 aa13.35□□□□□ -0.27
NUDCD3-206ENST00000475952 LBHD1Q9BQE6 289 aaPredicted RBP13.35□□□□□ -0.27
NUDCD3-206ENST00000475952 GPCPD1Q9NPB8 672 aa13.35□□□□□ -0.27
NUDCD3-206ENST00000475952 A1CFQ9NQ94 594 aaKnown RBP13.35□□□□□ -0.27
NUDCD3-206ENST00000475952 U3KPZ7 1027 aaPredicted RBP13.35□□□□□ -0.27
NUDCD3-206ENST00000475952 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
NUDCD3-206ENST00000475952 SNAP25P60880 206 aa13.34□□□□□ -0.27
NUDCD3-206ENST00000475952 GJC2Q5T442 439 aaPredicted RBP13.34□□□□□ -0.27
NUDCD3-206ENST00000475952 RALYLQ86SE5 291 aaKnown RBP13.34□□□□□ -0.27
NUDCD3-206ENST00000475952 ENAHQ8N8S7 591 aaPredicted RBP13.34□□□□□ -0.27
NUDCD3-206ENST00000475952 SENP6Q9GZR1 1112 aaPredicted RBP13.34□□□□□ -0.27
NUDCD3-206ENST00000475952 SEMA6BQ9H3T3 888 aa13.34□□□□□ -0.27
NUDCD3-206ENST00000475952 XPNPEP3Q9NQH7 507 aa13.34□□□□□ -0.27
NUDCD3-206ENST00000475952 ZSWIM5Q9P217 1185 aa13.34□□□□□ -0.27
NUDCD3-206ENST00000475952 ZHX1Q9UKY1 873 aaPredicted RBP13.34□□□□□ -0.27
NUDCD3-206ENST00000475952 WDR19Q8NEZ3 1342 aa13.34□□□□□ -0.27
NUDCD3-206ENST00000475952 XIRP2A4UGR9 3374 aa13.34□□□□□ -0.27
NUDCD3-206ENST00000475952 CYP21A2P08686 494 aa13.33□□□□□ -0.28
NUDCD3-206ENST00000475952 ZNF865P0CJ78 1059 aaPredicted RBP13.33□□□□□ -0.28
NUDCD3-206ENST00000475952 ASPRV1Q53RT3 343 aa13.33□□□□□ -0.28
NUDCD3-206ENST00000475952 IFIT1BQ5T764 474 aaKnown RBP13.33□□□□□ -0.28
NUDCD3-206ENST00000475952 KIAA1211Q6ZU35 1233 aa13.33□□□□□ -0.28
NUDCD3-206ENST00000475952 ARMCX2Q7L311 632 aa13.33□□□□□ -0.28
NUDCD3-206ENST00000475952 RNF180Q86T96 592 aa13.33□□□□□ -0.28
NUDCD3-206ENST00000475952 FAM133AQ8N9E0 248 aa13.33□□□□□ -0.28
NUDCD3-206ENST00000475952 MYLIPQ8WY64 445 aa13.33□□□□□ -0.28
NUDCD3-206ENST00000475952 ANKS1AQ92625 1134 aa13.33□□□□□ -0.28
NUDCD3-206ENST00000475952 TTYH1Q9H313 450 aaPredicted RBP13.33□□□□□ -0.28
NUDCD3-206ENST00000475952 ABHD16BQ9H3Z7 469 aa13.33□□□□□ -0.28
NUDCD3-206ENST00000475952 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.33□□□□□ -0.28
NUDCD3-206ENST00000475952 ERICH2A1L162 156 aa13.32□□□□□ -0.28
NUDCD3-206ENST00000475952 SNAI1O95863 264 aaPredicted RBP13.32□□□□□ -0.28
NUDCD3-206ENST00000475952 TAL1P17542 331 aaPredicted RBP13.32□□□□□ -0.28
NUDCD3-206ENST00000475952 PTH1RQ03431 593 aa13.32□□□□□ -0.28
NUDCD3-206ENST00000475952 MUM1L1Q5H9M0 696 aa13.32□□□□□ -0.28
NUDCD3-206ENST00000475952 C9orf50Q5SZB4 431 aa13.32□□□□□ -0.28
NUDCD3-206ENST00000475952 NSMFQ6X4W1 530 aa13.32□□□□□ -0.28
NUDCD3-206ENST00000475952 CCDC144CPQ8IYA2 1237 aa13.32□□□□□ -0.28
NUDCD3-206ENST00000475952 NCOA7Q8NI08 942 aa13.32□□□□□ -0.28
NUDCD3-206ENST00000475952 FGD4Q96M96 766 aa13.32□□□□□ -0.28
NUDCD3-206ENST00000475952 CHD7Q9P2D1 2997 aa13.32□□□□□ -0.28
NUDCD3-206ENST00000475952 FAM184BQ9ULE4 1060 aa13.32□□□□□ -0.28
NUDCD3-206ENST00000475952 ASB14A6NK59 587 aa13.31□□□□□ -0.28
NUDCD3-206ENST00000475952 PARP1P09874 1014 aaKnown RBP13.31□□□□□ -0.28
NUDCD3-206ENST00000475952 GOLGA8HP0CJ92 632 aa13.31□□□□□ -0.28
NUDCD3-206ENST00000475952 COL9A1P20849 921 aa13.31□□□□□ -0.28
NUDCD3-206ENST00000475952 ATN1P54259 1190 aaPredicted RBP13.31□□□□□ -0.28
NUDCD3-206ENST00000475952 CNTN2Q02246 1040 aa13.31□□□□□ -0.28
NUDCD3-206ENST00000475952 ACVR2BQ13705 512 aa13.31□□□□□ -0.28
NUDCD3-206ENST00000475952 SART3Q15020 963 aaKnown RBP13.31□□□□□ -0.28
NUDCD3-206ENST00000475952 LRRC41Q15345 812 aa13.31□□□□□ -0.28
NUDCD3-206ENST00000475952 SHHQ15465 462 aa13.31□□□□□ -0.28
NUDCD3-206ENST00000475952 BMP2KLQ5H9B9 411 aa13.31□□□□□ -0.28
NUDCD3-206ENST00000475952 CYP39A1Q9NYL5 469 aa13.31□□□□□ -0.28
NUDCD3-206ENST00000475952 ADD3Q9UEY8 706 aaKnown RBP13.31□□□□□ -0.28
NUDCD3-206ENST00000475952 SYNRGQ9UMZ2 1314 aa13.31□□□□□ -0.28
NUDCD3-206ENST00000475952 MYO9BQ13459 2157 aa13.3□□□□□ -0.28
NUDCD3-206ENST00000475952 E7EWF7 191 aa13.3□□□□□ -0.28
NUDCD3-206ENST00000475952 DHX16O60231 1041 aaKnown RBP13.3□□□□□ -0.28
NUDCD3-206ENST00000475952 FOSL2P15408 326 aa13.3□□□□□ -0.28
NUDCD3-206ENST00000475952 RTP1P59025 263 aa13.3□□□□□ -0.28
NUDCD3-206ENST00000475952 CDC37Q16543 378 aaPredicted RBP13.3□□□□□ -0.28
NUDCD3-206ENST00000475952 CYB5R4Q7L1T6 521 aa13.3□□□□□ -0.28
NUDCD3-206ENST00000475952 SYMPKQ92797 1274 aaKnown RBP13.3□□□□□ -0.28
NUDCD3-206ENST00000475952 MAP4K1Q92918 833 aa13.3□□□□□ -0.28
NUDCD3-206ENST00000475952 LENG1Q96BZ8 264 aaPredicted RBP13.3□□□□□ -0.28
NUDCD3-206ENST00000475952 MPHOSPH6Q99547 160 aaKnown RBP13.3□□□□□ -0.28
NUDCD3-206ENST00000475952 SPC25Q9HBM1 224 aa13.3□□□□□ -0.28
NUDCD3-206ENST00000475952 RBM8AQ9Y5S9 174 aaKnown RBP13.3□□□□□ -0.28
NUDCD3-206ENST00000475952 LOC102724159A0A0B4J2E5 919 aa13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 PTPDC1A2A3K4 754 aa13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 SOWAHBA6NEL2 793 aa13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 NFIBO00712 420 aa13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 ADAMTS4O75173 837 aa13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 DUSP11O75319 330 aaKnown RBP13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 PGK1P00558 417 aa13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 NEFLP07196 543 aa13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 SMAD3P84022 425 aaKnown RBP13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 PWP2Q15269 919 aaKnown RBP13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 SEC23AQ15436 765 aa13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 CCDC144BQ3MJ40 725 aa13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 USH1GQ495M9 461 aa13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 CASC1Q6TDU7 716 aa13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 RNF207Q6ZRF8 634 aa13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 CCDC136Q96JN2 1154 aa13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 ESYT1Q9BSJ8 1104 aa13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 PRKAG2Q9UGJ0 569 aa13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 PHF24Q9UPV7 400 aa13.29□□□□□ -0.28
NUDCD3-206ENST00000475952 TRANK1O15050 2925 aa13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 IFIT3O14879 490 aaKnown RBP13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 ADCYAP1R1P41586 468 aa13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 ALDH5A1P51649 535 aaPredicted RBP13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 BAATQ14032 418 aaPredicted RBP13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 WTAPQ15007 396 aa13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 SNX17Q15036 470 aa13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 SLC39A5Q6ZMH5 540 aa13.28□□□□□ -0.28
NUDCD3-206ENST00000475952 ADGRF4Q8IZF3 695 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms