RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 TINF2Q9BSI4 451 aa16.8■□□□□ 0.28
ABCF3-211ENST00000475728 USP26Q9BXU7 913 aa16.8■□□□□ 0.28
ABCF3-211ENST00000475728 JMJD4Q9H9V9 463 aa16.8■□□□□ 0.28
ABCF3-211ENST00000475728 SENP2Q9HC62 589 aa16.8■□□□□ 0.28
ABCF3-211ENST00000475728 VAT1LQ9HCJ6 419 aa16.8■□□□□ 0.28
ABCF3-211ENST00000475728 A1CFQ9NQ94 594 aaKnown RBP16.8■□□□□ 0.28
ABCF3-211ENST00000475728 CNPY2Q9Y2B0 182 aa16.8■□□□□ 0.28
ABCF3-211ENST00000475728 ABCB11O95342 1321 aa16.79■□□□□ 0.28
ABCF3-211ENST00000475728 SYNGAP1Q96PV0 1343 aa16.79■□□□□ 0.28
ABCF3-211ENST00000475728 SMARCA1P28370 1054 aa16.79■□□□□ 0.28
ABCF3-211ENST00000475728 ADCK5Q3MIX3 580 aa16.79■□□□□ 0.28
ABCF3-211ENST00000475728 NSMFQ6X4W1 530 aa16.79■□□□□ 0.28
ABCF3-211ENST00000475728 FBXO11Q86XK2 927 aa16.79■□□□□ 0.28
ABCF3-211ENST00000475728 CPVLQ9H3G5 476 aa16.79■□□□□ 0.28
ABCF3-211ENST00000475728 GPHNQ9NQX3 736 aaPredicted RBP16.79■□□□□ 0.28
ABCF3-211ENST00000475728 CYBAP13498 195 aa16.78■□□□□ 0.28
ABCF3-211ENST00000475728 CNGA1P29973 690 aa16.78■□□□□ 0.28
ABCF3-211ENST00000475728 QRICH1Q2TAL8 776 aa16.78■□□□□ 0.28
ABCF3-211ENST00000475728 MUM1L1Q5H9M0 696 aa16.78■□□□□ 0.28
ABCF3-211ENST00000475728 MAMDC4Q6UXC1 1216 aa16.78■□□□□ 0.28
ABCF3-211ENST00000475728 MCF2L2Q86YR7 1114 aa16.78■□□□□ 0.28
ABCF3-211ENST00000475728 FAM133AQ8N9E0 248 aa16.78■□□□□ 0.28
ABCF3-211ENST00000475728 ANKLE1Q8NAG6 615 aa16.78■□□□□ 0.28
ABCF3-211ENST00000475728 RGS22Q8NE09 1264 aa16.78■□□□□ 0.28
ABCF3-211ENST00000475728 MTMR8Q96EF0 704 aa16.78■□□□□ 0.28
ABCF3-211ENST00000475728 AMNQ9BXJ7 453 aa16.78■□□□□ 0.28
ABCF3-211ENST00000475728 LRRC2Q9BYS8 371 aa16.78■□□□□ 0.28
ABCF3-211ENST00000475728 CRISPLD2Q9H0B8 497 aa16.78■□□□□ 0.28
ABCF3-211ENST00000475728 RIOX1Q9H6W3 641 aa16.78■□□□□ 0.28
ABCF3-211ENST00000475728 CYP39A1Q9NYL5 469 aa16.78■□□□□ 0.28
ABCF3-211ENST00000475728 ADD3Q9UEY8 706 aaKnown RBP16.78■□□□□ 0.28
ABCF3-211ENST00000475728 MRPL11Q9Y3B7 192 aaKnown RBP16.78■□□□□ 0.28
ABCF3-211ENST00000475728 LOC102724159A0A0B4J2E5 919 aa16.77■□□□□ 0.28
ABCF3-211ENST00000475728 ASB14A6NK59 587 aa16.77■□□□□ 0.28
ABCF3-211ENST00000475728 ZBTB5O15062 677 aa16.77■□□□□ 0.28
ABCF3-211ENST00000475728 CCND3P30281 292 aaPredicted RBP16.77■□□□□ 0.28
ABCF3-211ENST00000475728 RCAN1P53805 252 aa16.77■□□□□ 0.28
ABCF3-211ENST00000475728 PWP2Q15269 919 aaKnown RBP16.77■□□□□ 0.28
ABCF3-211ENST00000475728 USH1GQ495M9 461 aa16.77■□□□□ 0.28
ABCF3-211ENST00000475728 MPHOSPH6Q99547 160 aaKnown RBP16.77■□□□□ 0.28
ABCF3-211ENST00000475728 SPZ1Q9BXG8 430 aa16.77■□□□□ 0.28
ABCF3-211ENST00000475728 CENPFP49454 3210 aa16.76■□□□□ 0.27
ABCF3-211ENST00000475728 PTPDC1A2A3K4 754 aa16.76■□□□□ 0.27
ABCF3-211ENST00000475728 NFIBO00712 420 aa16.76■□□□□ 0.27
ABCF3-211ENST00000475728 SEPT4O43236 478 aa16.76■□□□□ 0.27
ABCF3-211ENST00000475728 RPS6KB1P23443 525 aa16.76■□□□□ 0.27
ABCF3-211ENST00000475728 BAATQ14032 418 aaPredicted RBP16.76■□□□□ 0.27
ABCF3-211ENST00000475728 APOA5Q6Q788 366 aa16.76■□□□□ 0.27
ABCF3-211ENST00000475728 RNF207Q6ZRF8 634 aa16.76■□□□□ 0.27
ABCF3-211ENST00000475728 FANCBQ8NB91 859 aa16.76■□□□□ 0.27
ABCF3-211ENST00000475728 CLEC4DQ8WXI8 215 aa16.76■□□□□ 0.27
ABCF3-211ENST00000475728 SHISA4Q96DD7 197 aa16.76■□□□□ 0.27
ABCF3-211ENST00000475728 RRP36Q96EU6 259 aaKnown RBP16.76■□□□□ 0.27
ABCF3-211ENST00000475728 MYL10Q9BUA6 226 aa16.76■□□□□ 0.27
ABCF3-211ENST00000475728 TM6SF1Q9BZW5 370 aa16.76■□□□□ 0.27
ABCF3-211ENST00000475728 RBM28Q9NW13 759 aaKnown RBP16.76■□□□□ 0.27
ABCF3-211ENST00000475728 DDX20Q9UHI6 824 aaKnown RBP16.76■□□□□ 0.27
ABCF3-211ENST00000475728 OGDHLQ9ULD0 1010 aa16.76■□□□□ 0.27
ABCF3-211ENST00000475728 PNMA6FA0A0J9YX94 578 aa16.75■□□□□ 0.27
ABCF3-211ENST00000475728 B4DLN1 442 aa16.75■□□□□ 0.27
ABCF3-211ENST00000475728 ZBTB43O43298 467 aa16.75■□□□□ 0.27
ABCF3-211ENST00000475728 FARP2O94887 1054 aaPredicted RBP16.75■□□□□ 0.27
ABCF3-211ENST00000475728 CASTP20810 708 aaKnown RBP16.75■□□□□ 0.27
ABCF3-211ENST00000475728 MRPL12P52815 198 aaKnown RBP16.75■□□□□ 0.27
ABCF3-211ENST00000475728 CNTN2Q02246 1040 aa16.75■□□□□ 0.27
ABCF3-211ENST00000475728 PPP2R5BQ15173 497 aa16.75■□□□□ 0.27
ABCF3-211ENST00000475728 MICU3Q86XE3 530 aa16.75■□□□□ 0.27
ABCF3-211ENST00000475728 HOMER1Q86YM7 354 aa16.75■□□□□ 0.27
ABCF3-211ENST00000475728 FBXL16Q8N461 479 aa16.75■□□□□ 0.27
ABCF3-211ENST00000475728 SAMD3Q8N6K7 520 aa16.75■□□□□ 0.27
ABCF3-211ENST00000475728 ABHD16BQ9H3Z7 469 aa16.75■□□□□ 0.27
ABCF3-211ENST00000475728 SEC63Q9UGP8 760 aaKnown RBP16.75■□□□□ 0.27
ABCF3-211ENST00000475728 COLQQ9Y215 455 aaPredicted RBP16.75■□□□□ 0.27
ABCF3-211ENST00000475728 AKR1A1P14550 325 aa16.74■□□□□ 0.27
ABCF3-211ENST00000475728 ANAPC15P60006 121 aa16.74■□□□□ 0.27
ABCF3-211ENST00000475728 COL9A3Q14050 684 aaPredicted RBP16.74■□□□□ 0.27
ABCF3-211ENST00000475728 LHX8Q68G74 356 aa16.74■□□□□ 0.27
ABCF3-211ENST00000475728 ARMCX2Q7L311 632 aa16.74■□□□□ 0.27
ABCF3-211ENST00000475728 TRPV1Q8NER1 839 aa16.74■□□□□ 0.27
ABCF3-211ENST00000475728 DNERQ8NFT8 737 aa16.74■□□□□ 0.27
ABCF3-211ENST00000475728 TCEANC2Q96MN5 208 aa16.74■□□□□ 0.27
ABCF3-211ENST00000475728 PIGSQ96S52 555 aa16.74■□□□□ 0.27
ABCF3-211ENST00000475728 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.74■□□□□ 0.27
ABCF3-211ENST00000475728 MAP3K20Q9NYL2 800 aaKnown RBP16.74■□□□□ 0.27
ABCF3-211ENST00000475728 PCDHA1Q9Y5I3 950 aa16.74■□□□□ 0.27
ABCF3-211ENST00000475728 CYP46A1Q9Y6A2 500 aa16.74■□□□□ 0.27
ABCF3-211ENST00000475728 KLF18A0A0U1RQI7 1052 aa16.73■□□□□ 0.27
ABCF3-211ENST00000475728 CCDC196A0A1B0GTZ2 297 aa16.73■□□□□ 0.27
ABCF3-211ENST00000475728 SOWAHBA6NEL2 793 aa16.73■□□□□ 0.27
ABCF3-211ENST00000475728 CYTH3O43739 400 aa16.73■□□□□ 0.27
ABCF3-211ENST00000475728 TAL1P17542 331 aaPredicted RBP16.73■□□□□ 0.27
ABCF3-211ENST00000475728 CALML3P27482 149 aa16.73■□□□□ 0.27
ABCF3-211ENST00000475728 RPS6P62753 249 aaKnown RBP16.73■□□□□ 0.27
ABCF3-211ENST00000475728 RTN1Q16799 776 aa16.73■□□□□ 0.27
ABCF3-211ENST00000475728 PRAMEF19Q5SWL8 479 aa16.73■□□□□ 0.27
ABCF3-211ENST00000475728 Q6ZUG5 572 aa16.73■□□□□ 0.27
ABCF3-211ENST00000475728 RUFY3Q7L099 469 aa16.73■□□□□ 0.27
ABCF3-211ENST00000475728 ARRDC4Q8NCT1 418 aa16.73■□□□□ 0.27
ABCF3-211ENST00000475728 FGD4Q96M96 766 aa16.73■□□□□ 0.27
ABCF3-211ENST00000475728 ZSWIM6Q9HCJ5 1215 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms