RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 FBXO22Q8NEZ5 403 aa12.15□□□□□ -0.46
CCHCR1-212ENST00000475684 MRPL38Q96DV4 380 aaKnown RBP12.15□□□□□ -0.46
CCHCR1-212ENST00000475684 RAD9AQ99638 391 aa12.15□□□□□ -0.46
CCHCR1-212ENST00000475684 KATNBL1Q9H079 304 aa12.15□□□□□ -0.46
CCHCR1-212ENST00000475684 HDAC5Q9UQL6 1122 aa12.15□□□□□ -0.46
CCHCR1-212ENST00000475684 TRPC6Q9Y210 931 aa12.15□□□□□ -0.46
CCHCR1-212ENST00000475684 GNEQ9Y223 722 aaKnown RBP12.15□□□□□ -0.46
CCHCR1-212ENST00000475684 SCN5AQ14524 2016 aa12.15□□□□□ -0.47
CCHCR1-212ENST00000475684 H0Y858 1186 aa12.14□□□□□ -0.47
CCHCR1-212ENST00000475684 RAD21O60216 631 aa12.14□□□□□ -0.47
CCHCR1-212ENST00000475684 IGSF3O75054 1194 aa12.14□□□□□ -0.47
CCHCR1-212ENST00000475684 PTGS1P23219 599 aa12.14□□□□□ -0.47
CCHCR1-212ENST00000475684 FXR2P51116 673 aaKnown RBP eCLIP12.14□□□□□ -0.47
CCHCR1-212ENST00000475684 FGD4Q96M96 766 aa12.14□□□□□ -0.47
CCHCR1-212ENST00000475684 ALG13Q9NP73 1137 aaKnown RBP12.14□□□□□ -0.47
CCHCR1-212ENST00000475684 PIH1D3Q9NQM4 214 aaKnown RBP12.14□□□□□ -0.47
CCHCR1-212ENST00000475684 TLR9Q9NR96 1032 aa12.14□□□□□ -0.47
CCHCR1-212ENST00000475684 PARP14Q460N5 1801 aa12.14□□□□□ -0.47
CCHCR1-212ENST00000475684 PROB1E7EW31 1015 aa12.13□□□□□ -0.47
CCHCR1-212ENST00000475684 SRGAP3O43295 1099 aa12.13□□□□□ -0.47
CCHCR1-212ENST00000475684 GJB5O95377 273 aa12.13□□□□□ -0.47
CCHCR1-212ENST00000475684 SMPD1P17405 629 aa12.13□□□□□ -0.47
CCHCR1-212ENST00000475684 ZAP70P43403 619 aa12.13□□□□□ -0.47
CCHCR1-212ENST00000475684 DEFB103AP81534 67 aa12.13□□□□□ -0.47
CCHCR1-212ENST00000475684 EVX2Q03828 476 aa12.13□□□□□ -0.47
CCHCR1-212ENST00000475684 TIGD5Q53EQ6 642 aa12.13□□□□□ -0.47
CCHCR1-212ENST00000475684 FAM47CQ5HY64 1035 aa12.13□□□□□ -0.47
CCHCR1-212ENST00000475684 CCDC158Q5M9N0 1113 aa12.13□□□□□ -0.47
CCHCR1-212ENST00000475684 FAM83BQ5T0W9 1011 aa12.13□□□□□ -0.47
CCHCR1-212ENST00000475684 BANK1Q8NDB2 785 aa12.13□□□□□ -0.47
CCHCR1-212ENST00000475684 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.13□□□□□ -0.47
CCHCR1-212ENST00000475684 C17orf80Q9BSJ5 609 aa12.13□□□□□ -0.47
CCHCR1-212ENST00000475684 CLDND1Q9NY35 253 aa12.13□□□□□ -0.47
CCHCR1-212ENST00000475684 PRR23AA6NEV1 266 aa12.12□□□□□ -0.47
CCHCR1-212ENST00000475684 STXBP3O00186 592 aa12.12□□□□□ -0.47
CCHCR1-212ENST00000475684 IDH1O75874 414 aaKnown RBP12.12□□□□□ -0.47
CCHCR1-212ENST00000475684 VCPP55072 806 aaKnown RBP12.12□□□□□ -0.47
CCHCR1-212ENST00000475684 SMAD2Q15796 467 aaKnown RBP12.12□□□□□ -0.47
CCHCR1-212ENST00000475684 CLUL1Q15846 466 aa12.12□□□□□ -0.47
CCHCR1-212ENST00000475684 TCEAL5Q5H9L2 206 aa12.12□□□□□ -0.47
CCHCR1-212ENST00000475684 FAM117BQ6P1L5 589 aa12.12□□□□□ -0.47
CCHCR1-212ENST00000475684 CPXCR1Q8N123 301 aa12.12□□□□□ -0.47
CCHCR1-212ENST00000475684 FSD1Q9BTV5 496 aa12.12□□□□□ -0.47
CCHCR1-212ENST00000475684 MCM9Q9NXL9 1143 aa12.12□□□□□ -0.47
CCHCR1-212ENST00000475684 CTDP1Q9Y5B0 961 aaPredicted RBP12.12□□□□□ -0.47
CCHCR1-212ENST00000475684 COL4A6Q14031 1691 aa12.12□□□□□ -0.47
CCHCR1-212ENST00000475684 ZDBF2Q9HCK1 2354 aa12.12□□□□□ -0.47
CCHCR1-212ENST00000475684 SPTBN4Q9H254 2564 aa12.12□□□□□ -0.47
CCHCR1-212ENST00000475684 DMDP11532 3685 aa12.11□□□□□ -0.47
CCHCR1-212ENST00000475684 ZFHX4Q86UP3 3567 aa12.11□□□□□ -0.47
CCHCR1-212ENST00000475684 EEF2P13639 858 aaKnown RBP12.11□□□□□ -0.47
CCHCR1-212ENST00000475684 AKR1B1P15121 316 aa12.11□□□□□ -0.47
CCHCR1-212ENST00000475684 AVPR2P30518 371 aa12.11□□□□□ -0.47
CCHCR1-212ENST00000475684 ZXDAP98168 799 aa12.11□□□□□ -0.47
CCHCR1-212ENST00000475684 CNTN2Q02246 1040 aa12.11□□□□□ -0.47
CCHCR1-212ENST00000475684 BFSP2Q13515 415 aa12.11□□□□□ -0.47
CCHCR1-212ENST00000475684 IQSEC1Q6DN90 963 aa12.11□□□□□ -0.47
CCHCR1-212ENST00000475684 PIP4P2Q8N4L2 257 aa12.11□□□□□ -0.47
CCHCR1-212ENST00000475684 SLF1Q9BQI6 1058 aa12.11□□□□□ -0.47
CCHCR1-212ENST00000475684 GOPCQ9HD26 462 aa12.11□□□□□ -0.47
CCHCR1-212ENST00000475684 POLR3EQ9NVU0 708 aa12.11□□□□□ -0.47
CCHCR1-212ENST00000475684 Q9Y3F1 56 aa12.11□□□□□ -0.47
CCHCR1-212ENST00000475684 PTPRSQ13332 1948 aa12.11□□□□□ -0.47
CCHCR1-212ENST00000475684 KMT2EQ8IZD2 1858 aa12.1□□□□□ -0.47
CCHCR1-212ENST00000475684 MBTPS2O43462 519 aa12.1□□□□□ -0.47
CCHCR1-212ENST00000475684 ZBED4O75132 1171 aa12.1□□□□□ -0.47
CCHCR1-212ENST00000475684 MYL3P08590 195 aa12.1□□□□□ -0.47
CCHCR1-212ENST00000475684 COL19A1Q14993 1142 aa12.1□□□□□ -0.47
CCHCR1-212ENST00000475684 TMEM63BQ5T3F8 832 aa12.1□□□□□ -0.47
CCHCR1-212ENST00000475684 PPP1R13LQ8WUF5 828 aa12.1□□□□□ -0.47
CCHCR1-212ENST00000475684 SSH1Q8WYL5 1049 aa12.1□□□□□ -0.47
CCHCR1-212ENST00000475684 NSUN3Q9H649 340 aaKnown RBP12.1□□□□□ -0.47
CCHCR1-212ENST00000475684 GPHNQ9NQX3 736 aaPredicted RBP12.1□□□□□ -0.47
CCHCR1-212ENST00000475684 PDGFCQ9NRA1 345 aa12.1□□□□□ -0.47
CCHCR1-212ENST00000475684 SWAP70Q9UH65 585 aa12.1□□□□□ -0.47
CCHCR1-212ENST00000475684 FBXO40Q9UH90 709 aa12.1□□□□□ -0.47
CCHCR1-212ENST00000475684 NOD1Q9Y239 953 aa12.1□□□□□ -0.47
CCHCR1-212ENST00000475684 SIP14410 1827 aa12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 PLXNA3P51805 1871 aa12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 MED19A0JLT2 244 aaPredicted RBP12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 ASB14A6NK59 587 aa12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 ATP2A1O14983 1001 aa12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 NCK2O43639 380 aa12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 KDM4AO75164 1064 aa12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 RGS20O76081 388 aa12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 LTBRP36941 435 aa12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 PURAQ00577 322 aaKnown RBP12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 G3BP1Q13283 466 aaKnown RBP eCLIP12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 GPM6BQ13491 265 aa12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 LRRFIP1Q32MZ4 808 aaKnown RBP12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 NBPF20Q3BBV1 942 aa12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 EPC2Q52LR7 807 aa12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 CNKSR3Q6P9H4 555 aa12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 RPAINQ86UA6 219 aa12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 PRPF38AQ8NAV1 312 aaKnown RBP12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 DYNLL2Q96FJ2 89 aa12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 NUP88Q99567 741 aaPredicted RBP12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 DBNDD2Q9BQY9 259 aa12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 RAVER2Q9HCJ3 691 aaKnown RBP12.09□□□□□ -0.47
CCHCR1-212ENST00000475684 INSL6Q9Y581 213 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms