RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 PSMC6P62333 389 aa8.12□□□□□ -1.11
LSAMP-204ENST00000475403 TNNI3KQ59H18 835 aa8.12□□□□□ -1.11
LSAMP-204ENST00000475403 FAM83BQ5T0W9 1011 aa8.12□□□□□ -1.11
LSAMP-204ENST00000475403 EP400NLQ6ZTU2 488 aa8.12□□□□□ -1.11
LSAMP-204ENST00000475403 CCDC144CPQ8IYA2 1237 aa8.12□□□□□ -1.11
LSAMP-204ENST00000475403 RETREG2Q8NC44 543 aa8.12□□□□□ -1.11
LSAMP-204ENST00000475403 SLF1Q9BQI6 1058 aa8.12□□□□□ -1.11
LSAMP-204ENST00000475403 LMCD1Q9NZU5 365 aa8.12□□□□□ -1.11
LSAMP-204ENST00000475403 ZNF214Q9UL59 606 aaPredicted RBP8.12□□□□□ -1.11
LSAMP-204ENST00000475403 FPGT-TNNI3KV9GXZ4 949 aa8.12□□□□□ -1.11
LSAMP-204ENST00000475403 CACNA1AO00555 2505 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 TNKSO95271 1327 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 E9PSI1 815 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 ZBED4O75132 1171 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 CYP2C9P11712 490 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 XRCC6P12956 609 aaKnown RBP eCLIP8.11□□□□□ -1.11
LSAMP-204ENST00000475403 AKR1B1P15121 316 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 PTPN5P54829 565 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 GABPAQ06546 454 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 MTX1Q13505 466 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 FAM47CQ5HY64 1035 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 TMED8Q6PL24 325 aaPredicted RBP8.11□□□□□ -1.11
LSAMP-204ENST00000475403 HFE2Q6ZVN8 426 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 CPXCR1Q8N123 301 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 SLC43A3Q8NBI5 491 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 AGBL1Q96MI9 1066 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 UPF3BQ9BZI7 483 aaKnown RBP8.11□□□□□ -1.11
LSAMP-204ENST00000475403 ALDH8A1Q9H2A2 487 aaPredicted RBP8.11□□□□□ -1.11
LSAMP-204ENST00000475403 TRMT13Q9NUP7 481 aaKnown RBP8.11□□□□□ -1.11
LSAMP-204ENST00000475403 FBXO40Q9UH90 709 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 NOB1Q9ULX3 412 aaKnown RBP8.11□□□□□ -1.11
LSAMP-204ENST00000475403 ADAMTS5Q9UNA0 930 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 NOD1Q9Y239 953 aa8.11□□□□□ -1.11
LSAMP-204ENST00000475403 SCN5AQ14524 2016 aa8.1□□□□□ -1.11
LSAMP-204ENST00000475403 DNAJC25-GNG10A0A024R161 153 aa8.1□□□□□ -1.11
LSAMP-204ENST00000475403 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.1□□□□□ -1.11
LSAMP-204ENST00000475403 DYNC1LI2O43237 492 aaPredicted RBP8.1□□□□□ -1.11
LSAMP-204ENST00000475403 LPXNO60711 386 aa8.1□□□□□ -1.11
LSAMP-204ENST00000475403 BAIAP3O94812 1187 aa8.1□□□□□ -1.11
LSAMP-204ENST00000475403 ARHGEF15O94989 841 aa8.1□□□□□ -1.11
LSAMP-204ENST00000475403 GNAI2P04899 355 aa8.1□□□□□ -1.11
LSAMP-204ENST00000475403 EEF2P13639 858 aaKnown RBP8.1□□□□□ -1.11
LSAMP-204ENST00000475403 PTMSP20962 102 aa8.1□□□□□ -1.11
LSAMP-204ENST00000475403 REPS2Q8NFH8 660 aa8.1□□□□□ -1.11
LSAMP-204ENST00000475403 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.1□□□□□ -1.11
LSAMP-204ENST00000475403 SDR42E1Q8WUS8 393 aa8.1□□□□□ -1.11
LSAMP-204ENST00000475403 DYNLL2Q96FJ2 89 aa8.1□□□□□ -1.11
LSAMP-204ENST00000475403 ZNF512BQ96KM6 892 aaPredicted RBP8.1□□□□□ -1.11
LSAMP-204ENST00000475403 CCDC17Q96LX7 622 aa8.1□□□□□ -1.11
LSAMP-204ENST00000475403 PHOX2BQ99453 314 aa8.1□□□□□ -1.11
LSAMP-204ENST00000475403 GPR108Q9NPR9 543 aa8.1□□□□□ -1.11
LSAMP-204ENST00000475403 GPHNQ9NQX3 736 aaPredicted RBP8.1□□□□□ -1.11
LSAMP-204ENST00000475403 HOMER2Q9NSB8 354 aa8.1□□□□□ -1.11
LSAMP-204ENST00000475403 TANC1Q9C0D5 1861 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 ZDBF2Q9HCK1 2354 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 GRXCR2A6NFK2 248 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 ASB14A6NK59 587 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 H3BQ06 376 aaPredicted RBP8.09□□□□□ -1.11
LSAMP-204ENST00000475403 CTAGE5O15320 804 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 GFRA3O60609 400 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 CYP2D6P10635 497 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 EVX2Q03828 476 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 BFSP2Q13515 415 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 PTPROQ16827 1216 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.09□□□□□ -1.11
LSAMP-204ENST00000475403 SUGP1Q8IWZ8 645 aaKnown RBP8.09□□□□□ -1.11
LSAMP-204ENST00000475403 CCDC155Q8N6L0 562 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 CHST13Q8NET6 341 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 KIFC2Q96AC6 838 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 TGS1Q96RS0 853 aaKnown RBP8.09□□□□□ -1.11
LSAMP-204ENST00000475403 PRRX2Q99811 253 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 RIOK1Q9BRS2 568 aaKnown RBP8.09□□□□□ -1.11
LSAMP-204ENST00000475403 ANTXR1Q9H6X2 564 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 KANSL2Q9H9L4 492 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 RAVER2Q9HCJ3 691 aaKnown RBP8.09□□□□□ -1.11
LSAMP-204ENST00000475403 GNEQ9Y223 722 aaKnown RBP8.09□□□□□ -1.11
LSAMP-204ENST00000475403 COG6Q9Y2V7 657 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 RIPK3Q9Y572 518 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 ZNF318Q5VUA4 2279 aa8.09□□□□□ -1.11
LSAMP-204ENST00000475403 USP34Q70CQ2 3546 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 ASTN1O14525 1302 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 GRIN2DO15399 1336 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.08□□□□□ -1.12
LSAMP-204ENST00000475403 PNMA6EA0A0J9YXQ4 647 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 LCHNA4D1U4 455 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 PITPNM1O00562 1244 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 MYL3P08590 195 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 SMPD1P17405 629 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 CPT1AP50416 773 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 NKX3-2P78367 333 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 ZP2Q05996 745 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 TTF1Q15361 905 aaPredicted RBP8.08□□□□□ -1.12
LSAMP-204ENST00000475403 TIGD5Q53EQ6 642 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 BRDTQ58F21 947 aaPredicted RBP8.08□□□□□ -1.12
LSAMP-204ENST00000475403 SLC9C2Q5TAH2 1124 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 EEPD1Q7L9B9 569 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 SPRED2Q7Z698 418 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 FBXO16Q8IX29 292 aaPredicted RBP8.08□□□□□ -1.12
LSAMP-204ENST00000475403 PRPF38AQ8NAV1 312 aaKnown RBP8.08□□□□□ -1.12
LSAMP-204ENST00000475403 FBXO22Q8NEZ5 403 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms