RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 NPHP3-ACAD11A0A0J9YXS1 232 aa8.44□□□□□ -1.06
TM9SF3-204ENST00000475401 A0A1W2PQ45 241 aaPredicted RBP8.44□□□□□ -1.06
TM9SF3-204ENST00000475401 A0A1W2PQY0 241 aa8.44□□□□□ -1.06
TM9SF3-204ENST00000475401 FAM221BA6H8Z2 402 aa8.44□□□□□ -1.06
TM9SF3-204ENST00000475401 WTIPA6NIX2 430 aaPredicted RBP8.44□□□□□ -1.06
TM9SF3-204ENST00000475401 ECI1P42126 302 aa8.44□□□□□ -1.06
TM9SF3-204ENST00000475401 NR0B2Q15466 257 aa8.44□□□□□ -1.06
TM9SF3-204ENST00000475401 GALNT18Q6P9A2 607 aa8.44□□□□□ -1.06
TM9SF3-204ENST00000475401 SPATC1Q76KD6 591 aa8.44□□□□□ -1.06
TM9SF3-204ENST00000475401 KCTD13Q8WZ19 329 aa8.44□□□□□ -1.06
TM9SF3-204ENST00000475401 DNAJC7Q99615 494 aa8.44□□□□□ -1.06
TM9SF3-204ENST00000475401 CDC6Q99741 560 aa8.44□□□□□ -1.06
TM9SF3-204ENST00000475401 MCMBPQ9BTE3 642 aa8.44□□□□□ -1.06
TM9SF3-204ENST00000475401 G6PC3Q9BUM1 346 aa8.44□□□□□ -1.06
TM9SF3-204ENST00000475401 C19orf73Q9NVV2 129 aa8.44□□□□□ -1.06
TM9SF3-204ENST00000475401 KDM2BQ8NHM5 1336 aa8.44□□□□□ -1.06
TM9SF3-204ENST00000475401 FADS2P1A8MWK0 482 aa8.43□□□□□ -1.06
TM9SF3-204ENST00000475401 TBX1O43435 398 aa8.43□□□□□ -1.06
TM9SF3-204ENST00000475401 SNX17Q15036 470 aa8.43□□□□□ -1.06
TM9SF3-204ENST00000475401 GPR160Q9UJ42 338 aa8.43□□□□□ -1.06
TM9SF3-204ENST00000475401 ERVFC1P60507 584 aa8.42□□□□□ -1.06
TM9SF3-204ENST00000475401 LAPTM5Q13571 262 aa8.42□□□□□ -1.06
TM9SF3-204ENST00000475401 KCNMB1Q16558 191 aa8.42□□□□□ -1.06
TM9SF3-204ENST00000475401 TMEM67Q5HYA8 995 aa8.42□□□□□ -1.06
TM9SF3-204ENST00000475401 IQCEQ6IPM2 695 aa8.42□□□□□ -1.06
TM9SF3-204ENST00000475401 COPS5Q92905 334 aa8.42□□□□□ -1.06
TM9SF3-204ENST00000475401 IER2Q9BTL4 223 aa8.42□□□□□ -1.06
TM9SF3-204ENST00000475401 A0A1W2PQJ5 194 aa8.41□□□□□ -1.06
TM9SF3-204ENST00000475401 NRDCO43847 1150 aa8.41□□□□□ -1.06
TM9SF3-204ENST00000475401 THBDP07204 575 aa8.41□□□□□ -1.06
TM9SF3-204ENST00000475401 PLS3P13797 630 aa8.41□□□□□ -1.06
TM9SF3-204ENST00000475401 L1CAMP32004 1257 aa8.41□□□□□ -1.06
TM9SF3-204ENST00000475401 ZC3H12BQ5HYM0 836 aaKnown RBP8.41□□□□□ -1.06
TM9SF3-204ENST00000475401 NSMFQ6X4W1 530 aa8.41□□□□□ -1.06
TM9SF3-204ENST00000475401 ZSWIM9Q86XI8 627 aa8.41□□□□□ -1.06
TM9SF3-204ENST00000475401 C19orf44Q9H6X5 657 aa8.41□□□□□ -1.06
TM9SF3-204ENST00000475401 GPRC5CQ9NQ84 441 aa8.41□□□□□ -1.06
TM9SF3-204ENST00000475401 CLEC1BQ9P126 229 aa8.41□□□□□ -1.06
TM9SF3-204ENST00000475401 EBF1Q9UH73 591 aa8.41□□□□□ -1.06
TM9SF3-204ENST00000475401 MEFVO15553 781 aaPredicted RBP8.4□□□□□ -1.06
TM9SF3-204ENST00000475401 PRODHO43272 600 aa8.4□□□□□ -1.06
TM9SF3-204ENST00000475401 SCG5P05408 212 aa8.4□□□□□ -1.06
TM9SF3-204ENST00000475401 FGFR1P11362 822 aa8.4□□□□□ -1.06
TM9SF3-204ENST00000475401 TRHRP34981 398 aaPredicted RBP8.4□□□□□ -1.06
TM9SF3-204ENST00000475401 ARL4AP40617 200 aa8.4□□□□□ -1.06
TM9SF3-204ENST00000475401 GFRA1P56159 465 aa8.4□□□□□ -1.06
TM9SF3-204ENST00000475401 MAP4K2Q12851 820 aa8.4□□□□□ -1.06
TM9SF3-204ENST00000475401 LONRF2Q1L5Z9 754 aa8.4□□□□□ -1.06
TM9SF3-204ENST00000475401 E4F1Q66K89 784 aaPredicted RBP8.4□□□□□ -1.06
TM9SF3-204ENST00000475401 SLCO6A1Q86UG4 719 aa8.4□□□□□ -1.06
TM9SF3-204ENST00000475401 ZBTB38Q8NAP3 1195 aaPredicted RBP8.4□□□□□ -1.06
TM9SF3-204ENST00000475401 ASIC4Q96FT7 647 aa8.4□□□□□ -1.06
TM9SF3-204ENST00000475401 SLC26A8Q96RN1 970 aa8.4□□□□□ -1.06
TM9SF3-204ENST00000475401 ARHGEF4Q9NR80 690 aa8.4□□□□□ -1.06
TM9SF3-204ENST00000475401 DIAPH1O60610 1272 aaKnown RBP8.39□□□□□ -1.07
TM9SF3-204ENST00000475401 PABPC1P11940 636 aaKnown RBP8.39□□□□□ -1.07
TM9SF3-204ENST00000475401 TAL1P17542 331 aaPredicted RBP8.39□□□□□ -1.07
TM9SF3-204ENST00000475401 ITGB5P18084 799 aa8.39□□□□□ -1.07
TM9SF3-204ENST00000475401 GRIA2P42262 883 aa8.39□□□□□ -1.07
TM9SF3-204ENST00000475401 HSF5Q4G112 596 aaPredicted RBP8.39□□□□□ -1.07
TM9SF3-204ENST00000475401 PPIL6Q8IXY8 311 aa8.39□□□□□ -1.07
TM9SF3-204ENST00000475401 TMEM145Q8NBT3 493 aa8.39□□□□□ -1.07
TM9SF3-204ENST00000475401 TMEM52Q8NDY8 209 aa8.39□□□□□ -1.07
TM9SF3-204ENST00000475401 THAP3Q8WTV1 239 aaPredicted RBP8.39□□□□□ -1.07
TM9SF3-204ENST00000475401 FAM168AQ92567 244 aa8.39□□□□□ -1.07
TM9SF3-204ENST00000475401 MYO1BO43795 1136 aa8.38□□□□□ -1.07
TM9SF3-204ENST00000475401 NPHS1O60500 1241 aa8.38□□□□□ -1.07
TM9SF3-204ENST00000475401 PSPNO60542 156 aa8.38□□□□□ -1.07
TM9SF3-204ENST00000475401 GLI1P08151 1106 aa8.38□□□□□ -1.07
TM9SF3-204ENST00000475401 KCNAB2Q13303 367 aa8.38□□□□□ -1.07
TM9SF3-204ENST00000475401 SF1Q15637 639 aaKnown RBP8.38□□□□□ -1.07
TM9SF3-204ENST00000475401 MPZL3Q6UWV2 235 aa8.38□□□□□ -1.07
TM9SF3-204ENST00000475401 CPNE8Q86YQ8 564 aa8.38□□□□□ -1.07
TM9SF3-204ENST00000475401 SCUBE1Q8IWY4 988 aa8.38□□□□□ -1.07
TM9SF3-204ENST00000475401 NUP43Q8NFH3 380 aa8.38□□□□□ -1.07
TM9SF3-204ENST00000475401 DIO2Q92813 273 aa8.38□□□□□ -1.07
TM9SF3-204ENST00000475401 JMJD8Q96S16 334 aa8.38□□□□□ -1.07
TM9SF3-204ENST00000475401 MMP19Q99542 508 aa8.38□□□□□ -1.07
TM9SF3-204ENST00000475401 PAPLNO95428 1278 aa8.37□□□□□ -1.07
TM9SF3-204ENST00000475401 APPP05067 770 aa8.37□□□□□ -1.07
TM9SF3-204ENST00000475401 PRKCAP17252 672 aa8.37□□□□□ -1.07
TM9SF3-204ENST00000475401 CORO7P57737 925 aa8.37□□□□□ -1.07
TM9SF3-204ENST00000475401 ACBD5Q5T8D3 534 aaPredicted RBP8.37□□□□□ -1.07
TM9SF3-204ENST00000475401 FYB2Q5VWT5 728 aa8.37□□□□□ -1.07
TM9SF3-204ENST00000475401 ZSWIM2Q8NEG5 633 aa8.37□□□□□ -1.07
TM9SF3-204ENST00000475401 NPLOC4Q8TAT6 608 aa8.37□□□□□ -1.07
TM9SF3-204ENST00000475401 FRS2Q8WU20 508 aa8.37□□□□□ -1.07
TM9SF3-204ENST00000475401 SLC6A17Q9H1V8 727 aa8.37□□□□□ -1.07
TM9SF3-204ENST00000475401 CRTAC1Q9NQ79 661 aa8.37□□□□□ -1.07
TM9SF3-204ENST00000475401 FAM53CQ9NYF3 392 aa8.37□□□□□ -1.07
TM9SF3-204ENST00000475401 IMPACTQ9P2X3 320 aa8.37□□□□□ -1.07
TM9SF3-204ENST00000475401 ADCY3O60266 1144 aa8.36□□□□□ -1.07
TM9SF3-204ENST00000475401 FAM153BP0C7A2 387 aa8.36□□□□□ -1.07
TM9SF3-204ENST00000475401 LTBRP36941 435 aa8.36□□□□□ -1.07
TM9SF3-204ENST00000475401 SUMO1P63165 101 aaKnown RBP8.36□□□□□ -1.07
TM9SF3-204ENST00000475401 CYP4F8P98187 520 aa8.36□□□□□ -1.07
TM9SF3-204ENST00000475401 PRSS53Q2L4Q9 553 aa8.36□□□□□ -1.07
TM9SF3-204ENST00000475401 TIGD5Q53EQ6 642 aa8.36□□□□□ -1.07
TM9SF3-204ENST00000475401 C2orf27AQ580R0 203 aa8.36□□□□□ -1.07
TM9SF3-204ENST00000475401 XP32Q5T750 250 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms