RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, human

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DOB-208	ENST00000475235	KAT14	Q9H8E8	782 aa		13.47	□□□□□ -0.25
HLA-DOB-208	ENST00000475235	HOMER2	Q9NSB8	354 aa		13.47	□□□□□ -0.25
HLA-DOB-208	ENST00000475235	RNF146	Q9NTX7	359 aa		13.47	□□□□□ -0.25
HLA-DOB-208	ENST00000475235	ICAM1	P05362	532 aa		13.46	□□□□□ -0.25
HLA-DOB-208	ENST00000475235	ZNF543	Q08ER8	600 aa		13.46	□□□□□ -0.25
HLA-DOB-208	ENST00000475235	NBPF20	Q3BBV1	942 aa		13.46	□□□□□ -0.25
HLA-DOB-208	ENST00000475235	CCDC174	Q6PII3	467 aa		13.46	□□□□□ -0.25
HLA-DOB-208	ENST00000475235	RASGRP2	Q7LDG7	609 aa		13.46	□□□□□ -0.25
HLA-DOB-208	ENST00000475235	AGBL1	Q96MI9	1066 aa		13.46	□□□□□ -0.25
HLA-DOB-208	ENST00000475235	TRERF1	Q96PN7	1200 aa		13.46	□□□□□ -0.25
HLA-DOB-208	ENST00000475235	ZSWIM5	Q9P217	1185 aa		13.46	□□□□□ -0.25
HLA-DOB-208	ENST00000475235	CCPG1	Q9ULG6	757 aa		13.46	□□□□□ -0.25
HLA-DOB-208	ENST00000475235	PFAS	O15067	1338 aa		13.46	□□□□□ -0.25
HLA-DOB-208	ENST00000475235	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.46	□□□□□ -0.25
HLA-DOB-208	ENST00000475235	RARB	P10826	455 aa		13.45	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	ALAS1	P13196	640 aa		13.45	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	AKR1A1	P14550	325 aa		13.45	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	SLC16A2	P36021	539 aa		13.45	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	PRAMEF19	Q5SWL8	479 aa		13.45	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	UTP14C	Q5TAP6	766 aa	Known RBP	13.45	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	TAF3	Q5VWG9	929 aa		13.45	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	TTBK2	Q6IQ55	1244 aa		13.45	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.45	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	PNMA1	Q8ND90	353 aa		13.45	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	GPCPD1	Q9NPB8	672 aa		13.45	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	TNKS	O95271	1327 aa		13.45	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	MYH4	Q9Y623	1939 aa		13.45	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	PDE4DIP	Q5VU43	2346 aa		13.45	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	KBTBD13	C9JR72	458 aa		13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	POTEB2	H3BUK9	544 aa		13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	KIAA1211	Q6ZU35	1233 aa		13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	ENAH	Q8N8S7	591 aa	Predicted RBP	13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	A1CF	Q9NQ94	594 aa	Known RBP	13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	CYP21A2	P08686	494 aa		13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	SNAP25	P60880	206 aa		13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	PTH1R	Q03431	593 aa		13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	ASPRV1	Q53RT3	343 aa		13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	IFIT1B	Q5T764	474 aa	Known RBP	13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	RALYL	Q86SE5	291 aa	Known RBP	13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	FAM133A	Q8N9E0	248 aa		13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	MAP4K1	Q92918	833 aa		13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	ABHD16B	Q9H3Z7	469 aa		13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	XPNPEP3	Q9NQH7	507 aa		13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	TMEM51	Q9NW97	253 aa		13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	FAM184B	Q9ULE4	1060 aa		13.44	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	WDR19	Q8NEZ3	1342 aa		13.43	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	ASB14	A6NK59	587 aa		13.43	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	SNAI1	O95863	264 aa	Predicted RBP	13.43	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	BMP2KL	Q5H9B9	411 aa		13.43	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	ANO1	Q5XXA6	986 aa		13.43	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	RNF180	Q86T96	592 aa		13.43	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	C7orf61	Q8IZ16	206 aa		13.43	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.43	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.43	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.43	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	COL11A1	P12107	1806 aa	Predicted RBP	13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	ERICH2	A1L162	156 aa		13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	PARP1	P09874	1014 aa	Known RBP	13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	TAL1	P17542	331 aa	Predicted RBP	13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	ACVR2B	Q13705	512 aa		13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	SART3	Q15020	963 aa	Known RBP	13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	MUM1L1	Q5H9M0	696 aa		13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	HABP4	Q5JVS0	413 aa	Known RBP	13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	GJC2	Q5T442	439 aa	Predicted RBP	13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	NSMF	Q6X4W1	530 aa		13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	ARMCX2	Q7L311	632 aa		13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	NCOA7	Q8NI08	942 aa		13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	FGD4	Q96M96	766 aa		13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	ZNF830	Q96NB3	372 aa	Predicted RBP	13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	CYP39A1	Q9NYL5	469 aa		13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	COLQ	Q9Y215	455 aa	Predicted RBP	13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	LAMA4	Q16363	1823 aa		13.42	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	GOLGA8H	P0CJ92	632 aa		13.41	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	CNTN2	Q02246	1040 aa		13.41	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	LRRC41	Q15345	812 aa		13.41	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	CCDC144CP	Q8IYA2	1237 aa		13.41	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	MAF1	Q9H063	256 aa		13.41	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	ADD3	Q9UEY8	706 aa	Known RBP	13.41	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	RBM8A	Q9Y5S9	174 aa	Known RBP	13.41	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	LOC102724159	A0A0B4J2E5	919 aa		13.4	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	SOWAHB	A6NEL2	793 aa		13.4	□□□□□ -0.26
HLA-DOB-208	ENST00000475235		E7EWF7	191 aa		13.4	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	DUSP11	O75319	330 aa	Known RBP	13.4	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	PWP2	Q15269	919 aa	Known RBP	13.4	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	SEC23A	Q15436	765 aa		13.4	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	LRRC26	Q2I0M4	334 aa		13.4	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	CASC1	Q6TDU7	716 aa		13.4	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	CYB5R4	Q7L1T6	521 aa		13.4	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	ESYT1	Q9BSJ8	1104 aa		13.4	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	SPC25	Q9HBM1	224 aa		13.4	□□□□□ -0.26
HLA-DOB-208	ENST00000475235	TTC36	A6NLP5	189 aa		13.39	□□□□□ -0.27
HLA-DOB-208	ENST00000475235	IFIT3	O14879	490 aa	Known RBP	13.39	□□□□□ -0.27
HLA-DOB-208	ENST00000475235	CDC37	Q16543	378 aa	Predicted RBP	13.39	□□□□□ -0.27
HLA-DOB-208	ENST00000475235	MAP7D2	Q96T17	732 aa		13.39	□□□□□ -0.27
HLA-DOB-208	ENST00000475235	MPHOSPH6	Q99547	160 aa	Known RBP	13.39	□□□□□ -0.27
HLA-DOB-208	ENST00000475235	UBA5	Q9GZZ9	404 aa		13.39	□□□□□ -0.27
HLA-DOB-208	ENST00000475235	PHF24	Q9UPV7	400 aa		13.39	□□□□□ -0.27
HLA-DOB-208	ENST00000475235	PTPDC1	A2A3K4	754 aa		13.39	□□□□□ -0.27
HLA-DOB-208	ENST00000475235	NFIB	O00712	420 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms