RNA–Protein interactions for RNA: ENST00000474952.5

TFAP2A-210, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 5

Gene TFAP2A, Length 1,621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-210ENST00000474952 ZC3H15Q8WU90 426 aaKnown RBP28.14■■■□□ 2.09
TFAP2A-210ENST00000474952 FBXO28Q9NVF7 368 aa28.14■■■□□ 2.09
TFAP2A-210ENST00000474952 PRKG1Q13976 671 aa28.13■■■□□ 2.09
TFAP2A-210ENST00000474952 ZNF280CQ8ND82 737 aa28.13■■■□□ 2.09
TFAP2A-210ENST00000474952 RBSNQ9H1K0 784 aa28.13■■■□□ 2.09
TFAP2A-210ENST00000474952 EMILIN3Q9NT22 766 aa28.13■■■□□ 2.09
TFAP2A-210ENST00000474952 FAM13BQ9NYF5 915 aa28.13■■■□□ 2.09
TFAP2A-210ENST00000474952 TRAF1Q13077 416 aa28.12■■■□□ 2.09
TFAP2A-210ENST00000474952 ARL6IP4Q66PJ3 421 aaKnown RBP28.12■■■□□ 2.09
TFAP2A-210ENST00000474952 KCNH3Q9ULD8 1083 aa28.12■■■□□ 2.09
TFAP2A-210ENST00000474952 BACE1P56817 501 aa28.11■■■□□ 2.09
TFAP2A-210ENST00000474952 DGKZQ13574 1117 aa28.11■■■□□ 2.09
TFAP2A-210ENST00000474952 LETM2Q2VYF4 491 aa28.11■■■□□ 2.09
TFAP2A-210ENST00000474952 TIGD1Q96MW7 591 aa28.11■■■□□ 2.09
TFAP2A-210ENST00000474952 ZHX2Q9Y6X8 837 aa28.11■■■□□ 2.09
TFAP2A-210ENST00000474952 PAPPA2Q9BXP8 1791 aa28.11■■■□□ 2.09
TFAP2A-210ENST00000474952 TAF1DQ9H5J8 278 aaPredicted RBP28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 IQCA1LA6NCM1 817 aa28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 USP17L15C9J2P7 530 aa28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 USP17L13C9JLJ4 530 aa28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 USP17L11C9JVI0 530 aa28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 USP17L18D6R9N7 530 aa28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 USP17L22D6RA61 530 aa28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 USP17L17D6RBQ6 530 aa28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 USP17L19D6RCP7 530 aa28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 USP17L20D6RJB6 530 aa28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 CCNT1O60563 726 aaKnown RBP28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 VCAM1P19320 739 aa28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 USP17L24Q0WX57 530 aa28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 ORC2Q13416 577 aaPredicted RBP28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 CCDC174Q6PII3 467 aa28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 USP17L6PQ6QN14 398 aa28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 SDF4Q9BRK5 362 aa28.1■■■□□ 2.09
TFAP2A-210ENST00000474952 WDR90Q96KV7 1748 aa28.09■■■□□ 2.09
TFAP2A-210ENST00000474952 SRCAPQ6ZRS2 3230 aa28.09■■■□□ 2.09
TFAP2A-210ENST00000474952 VWA3AA6NCI4 1184 aa28.09■■■□□ 2.09
TFAP2A-210ENST00000474952 CCDC192P0DO97 292 aa28.09■■■□□ 2.09
TFAP2A-210ENST00000474952 XRCC6P12956 609 aaKnown RBP eCLIP28.09■■■□□ 2.09
TFAP2A-210ENST00000474952 TAL1P17542 331 aaPredicted RBP28.09■■■□□ 2.09
TFAP2A-210ENST00000474952 MAP3K9P80192 1104 aa28.09■■■□□ 2.09
TFAP2A-210ENST00000474952 IL17AQ16552 155 aa28.09■■■□□ 2.09
TFAP2A-210ENST00000474952 SAMD1Q6SPF0 538 aaPredicted RBP28.09■■■□□ 2.09
TFAP2A-210ENST00000474952 SLF1Q9BQI6 1058 aa28.09■■■□□ 2.09
TFAP2A-210ENST00000474952 TMEM60Q9H2L4 133 aa28.09■■■□□ 2.09
TFAP2A-210ENST00000474952 POTECB2RU33 542 aa28.08■■■□□ 2.09
TFAP2A-210ENST00000474952 LAD1O00515 517 aa28.08■■■□□ 2.09
TFAP2A-210ENST00000474952 MEIS2O14770 477 aa28.08■■■□□ 2.09
TFAP2A-210ENST00000474952 PRPF38AQ8NAV1 312 aaKnown RBP28.08■■■□□ 2.09
TFAP2A-210ENST00000474952 OTOFQ9HC10 1997 aa28.08■■■□□ 2.09
TFAP2A-210ENST00000474952 EDIL3O43854 480 aa28.07■■■□□ 2.08
TFAP2A-210ENST00000474952 PPP1R12BO60237 982 aaPredicted RBP28.07■■■□□ 2.08
TFAP2A-210ENST00000474952 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.07■■■□□ 2.08
TFAP2A-210ENST00000474952 USP49Q70CQ1 688 aa28.07■■■□□ 2.08
TFAP2A-210ENST00000474952 TANGO6Q9C0B7 1094 aa28.07■■■□□ 2.08
TFAP2A-210ENST00000474952 C19orf81C9J6K1 198 aa28.07■■■□□ 2.08
TFAP2A-210ENST00000474952 OPLAHO14841 1288 aa28.07■■■□□ 2.08
TFAP2A-210ENST00000474952 TYRO3Q06418 890 aa28.07■■■□□ 2.08
TFAP2A-210ENST00000474952 EAPPQ56P03 285 aaPredicted RBP28.07■■■□□ 2.08
TFAP2A-210ENST00000474952 MCTP2Q6DN12 878 aa28.07■■■□□ 2.08
TFAP2A-210ENST00000474952 CDCA5Q96FF9 252 aa28.07■■■□□ 2.08
TFAP2A-210ENST00000474952 C12orf42Q96LP6 360 aa28.07■■■□□ 2.08
TFAP2A-210ENST00000474952 RPAP3Q9H6T3 665 aaPredicted RBP28.07■■■□□ 2.08
TFAP2A-210ENST00000474952 SNCAIPQ9Y6H5 919 aa28.07■■■□□ 2.08
TFAP2A-210ENST00000474952 MYH7BA7E2Y1 1941 aa28.06■■■□□ 2.08
TFAP2A-210ENST00000474952 NEMFO60524 1076 aa28.06■■■□□ 2.08
TFAP2A-210ENST00000474952 PRPHP41219 470 aa28.06■■■□□ 2.08
TFAP2A-210ENST00000474952 AP3B2Q13367 1082 aa28.06■■■□□ 2.08
TFAP2A-210ENST00000474952 VGLL4Q14135 290 aa28.06■■■□□ 2.08
TFAP2A-210ENST00000474952 SYMPKQ92797 1274 aaKnown RBP28.06■■■□□ 2.08
TFAP2A-210ENST00000474952 EPSTI1Q96J88 318 aa28.06■■■□□ 2.08
TFAP2A-210ENST00000474952 SMCHD1A6NHR9 2005 aa28.06■■■□□ 2.08
TFAP2A-210ENST00000474952 LONP1P36776 959 aaKnown RBP28.05■■■□□ 2.08
TFAP2A-210ENST00000474952 SASS6Q6UVJ0 657 aa28.05■■■□□ 2.08
TFAP2A-210ENST00000474952 DTHD1Q6ZMT9 781 aa28.05■■■□□ 2.08
TFAP2A-210ENST00000474952 ANO3Q9BYT9 981 aa28.05■■■□□ 2.08
TFAP2A-210ENST00000474952 AFG3L2Q9Y4W6 797 aa28.05■■■□□ 2.08
TFAP2A-210ENST00000474952 PARP14Q460N5 1801 aa28.04■■■□□ 2.08
TFAP2A-210ENST00000474952 OR52Z1P0C646 297 aa28.04■■■□□ 2.08
TFAP2A-210ENST00000474952 LONRF3Q496Y0 759 aa28.04■■■□□ 2.08
TFAP2A-210ENST00000474952 KRBA2Q6ZNG9 492 aa28.04■■■□□ 2.08
TFAP2A-210ENST00000474952 PNMA8AQ86V59 439 aaPredicted RBP28.04■■■□□ 2.08
TFAP2A-210ENST00000474952 LDHDQ86WU2 507 aa28.04■■■□□ 2.08
TFAP2A-210ENST00000474952 TEX2Q8IWB9 1127 aa28.04■■■□□ 2.08
TFAP2A-210ENST00000474952 PIK3CDO00329 1044 aa28.03■■■□□ 2.08
TFAP2A-210ENST00000474952 POLR2DO15514 142 aaKnown RBP28.03■■■□□ 2.08
TFAP2A-210ENST00000474952 FLOT1O75955 427 aa28.03■■■□□ 2.08
TFAP2A-210ENST00000474952 NF2P35240 595 aa28.03■■■□□ 2.08
TFAP2A-210ENST00000474952 IREB2P48200 963 aaKnown RBP28.03■■■□□ 2.08
TFAP2A-210ENST00000474952 HMGCS2P54868 508 aa28.03■■■□□ 2.08
TFAP2A-210ENST00000474952 PPP1R9AQ9ULJ8 1098 aa28.03■■■□□ 2.08
TFAP2A-210ENST00000474952 MRPL11Q9Y3B7 192 aaKnown RBP28.03■■■□□ 2.08
TFAP2A-210ENST00000474952 CSADQ9Y600 493 aa28.03■■■□□ 2.08
TFAP2A-210ENST00000474952 ABCB11O95342 1321 aa28.03■■■□□ 2.08
TFAP2A-210ENST00000474952 TDP2O95551 362 aa28.03■■■□□ 2.08
TFAP2A-210ENST00000474952 ICAM1P05362 532 aa28.03■■■□□ 2.08
TFAP2A-210ENST00000474952 RNF214Q8ND24 703 aa28.03■■■□□ 2.08
TFAP2A-210ENST00000474952 P2RX7Q99572 595 aaKnown RBP28.03■■■□□ 2.08
TFAP2A-210ENST00000474952 PANK2Q9BZ23 570 aa28.03■■■□□ 2.08
TFAP2A-210ENST00000474952 FOSP01100 380 aaPredicted RBP28.02■■■□□ 2.08
TFAP2A-210ENST00000474952 PPP4R3AQ6IN85 833 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms