RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 RTEL1Q9NZ71 1219 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 INPP5FQ9Y2H2 1132 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 H0YC42 278 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 TGDSO95455 350 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 CD4P01730 458 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 LDHBP07195 334 aaKnown RBP3.89□□□□□ -1.79
UBR3-208ENST00000474426 MAPK1P28482 360 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 BCAMP50895 628 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 FAPQ12884 760 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 PLCB4Q15147 1175 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 TLDC1Q6P9B6 456 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 GBP6Q6ZN66 633 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 RUFY3Q7L099 469 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 TMC4Q7Z404 712 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 KIFC2Q96AC6 838 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 PURBQ96QR8 312 aaKnown RBP3.89□□□□□ -1.79
UBR3-208ENST00000474426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.89□□□□□ -1.79
UBR3-208ENST00000474426 OXCT2Q9BYC2 517 aaPredicted RBP3.89□□□□□ -1.79
UBR3-208ENST00000474426 ALG2Q9H553 416 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 ELAC1Q9H777 363 aaKnown RBP3.89□□□□□ -1.79
UBR3-208ENST00000474426 AATFQ9NY61 560 aaKnown RBP eCLIP3.89□□□□□ -1.79
UBR3-208ENST00000474426 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.89□□□□□ -1.79
UBR3-208ENST00000474426 FNIP2Q9P278 1114 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 STRIP2Q9ULQ0 834 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 GOLGA6L19H0YKK7 550 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 NDUFAB1O14561 156 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 POLR3GO15318 223 aaPredicted RBP3.89□□□□□ -1.79
UBR3-208ENST00000474426 ZBTB14O43829 449 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 CEP104O60308 925 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 COBLO75128 1261 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 MT-ND3P03897 115 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 IFIT1P09914 478 aaKnown RBP3.89□□□□□ -1.79
UBR3-208ENST00000474426 ETFBP38117 255 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 FUT2Q10981 343 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 PPA1Q15181 289 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 PPP1R7Q15435 360 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 EAPPQ56P03 285 aaPredicted RBP3.89□□□□□ -1.79
UBR3-208ENST00000474426 NKAPQ8N5F7 415 aaKnown RBP3.89□□□□□ -1.79
UBR3-208ENST00000474426 SDCCAG3Q96C92 435 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 STRBPQ96SI9 672 aaKnown RBP3.89□□□□□ -1.79
UBR3-208ENST00000474426 NSRP1Q9H0G5 558 aaKnown RBP3.89□□□□□ -1.79
UBR3-208ENST00000474426 GRPEL1Q9HAV7 217 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 CRLF2Q9HC73 371 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 PLCB1Q9NQ66 1216 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 CYLDQ9NQC7 956 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 PHF24Q9UPV7 400 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 TRAF3IP3Q9Y228 551 aa3.89□□□□□ -1.79
UBR3-208ENST00000474426 GPR75-ASB3A0A0A6YYF3 556 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 EIF3CLB5ME19 914 aaKnown RBP3.88□□□□□ -1.79
UBR3-208ENST00000474426 ABLIM1O14639 778 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 NCK2O43639 380 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 KRT1P04264 644 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 TROVE2P10155 538 aaKnown RBP eCLIP3.88□□□□□ -1.79
UBR3-208ENST00000474426 PRKAR2AP13861 404 aaKnown RBP3.88□□□□□ -1.79
UBR3-208ENST00000474426 ANXA13P27216 316 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 PDE4AP27815 886 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 POLR2BP30876 1174 aaKnown RBP3.88□□□□□ -1.79
UBR3-208ENST00000474426 CCNA1P78396 465 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 PHEXP78562 749 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 KCNC4Q03721 635 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 ADALQ6DHV7 355 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 XKR5Q6UX68 686 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 FAM47EQ6ZV65 393 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 MICALCLQ6ZW33 695 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 GALNT13Q8IUC8 556 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 NRSN1Q8IZ57 195 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 PPP1R14CQ8TAE6 165 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 MDM1Q8TC05 714 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 PPP1R14BQ96C90 147 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 EIF3CQ99613 913 aaKnown RBP3.88□□□□□ -1.79
UBR3-208ENST00000474426 GPATCH1Q9BRR8 931 aaKnown RBP3.88□□□□□ -1.79
UBR3-208ENST00000474426 PARD6BQ9BYG5 372 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 RABEP2Q9H5N1 569 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 NRDE2Q9H7Z3 1164 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 HELLSQ9NRZ9 838 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 MOCS1Q9NZB8 636 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 MTUS1Q9ULD2 1270 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 ERC2O15083 957 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 ASAP2O43150 1006 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 DIAPH2O60879 1101 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 ETV3P41162 512 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 TM4SF4P48230 202 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 MRPL12P52815 198 aaKnown RBP3.88□□□□□ -1.79
UBR3-208ENST00000474426 PLIN5Q00G26 463 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 NFIAQ12857 509 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 ZNF211Q13398 564 aaPredicted RBP3.88□□□□□ -1.79
UBR3-208ENST00000474426 GALEQ14376 348 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 SLC45A4Q5BKX6 768 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 PCNX4Q63HM2 1172 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 MFSD6Q6ZSS7 791 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 RNF168Q8IYW5 571 aaPredicted RBP3.88□□□□□ -1.79
UBR3-208ENST00000474426 C2orf69Q8N8R5 385 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 TRIM58Q8NG06 486 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 KIF18AQ8NI77 898 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 CCDC114Q96M63 670 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 CDH19Q9H159 772 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 CLSTN2Q9H4D0 955 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 MMRN2Q9H8L6 949 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 BCL2L12Q9HB09 334 aa3.88□□□□□ -1.79
UBR3-208ENST00000474426 NLRC4Q9NPP4 1024 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms