RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 GLT1D1Q96MS3 346 aa23.93■■□□□ 1.42
PDLIM4-206ENST00000474421 TOX2Q96NM4 488 aa23.93■■□□□ 1.42
PDLIM4-206ENST00000474421 DSCC1Q9BVC3 393 aa23.93■■□□□ 1.42
PDLIM4-206ENST00000474421 KATNBL1Q9H079 304 aa23.93■■□□□ 1.42
PDLIM4-206ENST00000474421 GPCPD1Q9NPB8 672 aa23.93■■□□□ 1.42
PDLIM4-206ENST00000474421 CTNNA3Q9UI47 895 aa23.93■■□□□ 1.42
PDLIM4-206ENST00000474421 ELP1O95163 1332 aa23.92■■□□□ 1.42
PDLIM4-206ENST00000474421 FRMPD2Q68DX3 1309 aaPredicted RBP23.92■■□□□ 1.42
PDLIM4-206ENST00000474421 ZNF543Q08ER8 600 aa23.92■■□□□ 1.42
PDLIM4-206ENST00000474421 MUM1L1Q5H9M0 696 aa23.92■■□□□ 1.42
PDLIM4-206ENST00000474421 NSMFQ6X4W1 530 aa23.92■■□□□ 1.42
PDLIM4-206ENST00000474421 NEDD4P46934 1319 aa23.91■■□□□ 1.42
PDLIM4-206ENST00000474421 DCDC2CA8MYV0 355 aa23.91■■□□□ 1.42
PDLIM4-206ENST00000474421 PQBP1O60828 265 aaKnown RBP23.91■■□□□ 1.42
PDLIM4-206ENST00000474421 IMMTQ16891 758 aaKnown RBP23.91■■□□□ 1.42
PDLIM4-206ENST00000474421 ANKRD33Q7Z3H0 272 aa23.91■■□□□ 1.42
PDLIM4-206ENST00000474421 BADQ92934 168 aa23.91■■□□□ 1.42
PDLIM4-206ENST00000474421 MROH7Q68CQ1 1323 aa23.9■■□□□ 1.42
PDLIM4-206ENST00000474421 LOC102724159A0A0B4J2E5 919 aa23.9■■□□□ 1.42
PDLIM4-206ENST00000474421 TRIM43BA6NCK2 446 aa23.9■■□□□ 1.42
PDLIM4-206ENST00000474421 KIAA0355O15063 1070 aa23.9■■□□□ 1.42
PDLIM4-206ENST00000474421 SNHG28P0DPA3 235 aa23.9■■□□□ 1.42
PDLIM4-206ENST00000474421 NKX3-2P78367 333 aa23.9■■□□□ 1.42
PDLIM4-206ENST00000474421 TNFAIP2Q03169 654 aa23.9■■□□□ 1.42
PDLIM4-206ENST00000474421 PWP2Q15269 919 aaKnown RBP23.9■■□□□ 1.42
PDLIM4-206ENST00000474421 GNASQ5JWF2 1037 aa23.9■■□□□ 1.42
PDLIM4-206ENST00000474421 GPATCH4Q5T3I0 446 aaKnown RBP23.9■■□□□ 1.42
PDLIM4-206ENST00000474421 NOL8Q76FK4 1167 aaKnown RBP23.9■■□□□ 1.42
PDLIM4-206ENST00000474421 SH3RF1Q7Z6J0 888 aa23.9■■□□□ 1.42
PDLIM4-206ENST00000474421 DEFB123Q8N688 67 aa23.9■■□□□ 1.42
PDLIM4-206ENST00000474421 TRIM43Q96BQ3 446 aaPredicted RBP23.9■■□□□ 1.42
PDLIM4-206ENST00000474421 ADD3Q9UEY8 706 aaKnown RBP23.9■■□□□ 1.42
PDLIM4-206ENST00000474421 MYADML2A6NDP7 307 aa23.89■■□□□ 1.41
PDLIM4-206ENST00000474421 ADCY6O43306 1168 aa23.89■■□□□ 1.41
PDLIM4-206ENST00000474421 ASGR1P07306 291 aa23.89■■□□□ 1.41
PDLIM4-206ENST00000474421 TMEM39AQ9NV64 488 aa23.89■■□□□ 1.41
PDLIM4-206ENST00000474421 KDM4AO75164 1064 aa23.88■■□□□ 1.41
PDLIM4-206ENST00000474421 RAG1P15918 1043 aa23.88■■□□□ 1.41
PDLIM4-206ENST00000474421 IQSEC1Q6DN90 963 aa23.88■■□□□ 1.41
PDLIM4-206ENST00000474421 VTI1AQ96AJ9 217 aa23.88■■□□□ 1.41
PDLIM4-206ENST00000474421 CNNM2Q9H8M5 875 aa23.88■■□□□ 1.41
PDLIM4-206ENST00000474421 VTA1Q9NP79 307 aa23.88■■□□□ 1.41
PDLIM4-206ENST00000474421 LAMA2P24043 3122 aaKnown RBP23.88■■□□□ 1.41
PDLIM4-206ENST00000474421 WDR19Q8NEZ3 1342 aa23.87■■□□□ 1.41
PDLIM4-206ENST00000474421 BAATQ14032 418 aaPredicted RBP23.87■■□□□ 1.41
PDLIM4-206ENST00000474421 MORC4Q8TE76 937 aa23.87■■□□□ 1.41
PDLIM4-206ENST00000474421 ANKS1AQ92625 1134 aa23.87■■□□□ 1.41
PDLIM4-206ENST00000474421 ZKSCAN3Q9BRR0 538 aa23.87■■□□□ 1.41
PDLIM4-206ENST00000474421 KRT23Q9C075 422 aa23.87■■□□□ 1.41
PDLIM4-206ENST00000474421 AP5M1Q9H0R1 490 aa23.87■■□□□ 1.41
PDLIM4-206ENST00000474421 KAT14Q9H8E8 782 aa23.87■■□□□ 1.41
PDLIM4-206ENST00000474421 LRRC37A2A6NM11 1700 aa23.87■■□□□ 1.41
PDLIM4-206ENST00000474421 ASTN1O14525 1302 aa23.86■■□□□ 1.41
PDLIM4-206ENST00000474421 LCTP09848 1927 aa23.86■■□□□ 1.41
PDLIM4-206ENST00000474421 A0A0U1RQG5 324 aaPredicted RBP23.86■■□□□ 1.41
PDLIM4-206ENST00000474421 PTPDC1A2A3K4 754 aa23.86■■□□□ 1.41
PDLIM4-206ENST00000474421 ZEB2O60315 1214 aa23.86■■□□□ 1.41
PDLIM4-206ENST00000474421 FAAP100Q0VG06 881 aa23.86■■□□□ 1.41
PDLIM4-206ENST00000474421 TTC22Q5TAA0 569 aa23.86■■□□□ 1.41
PDLIM4-206ENST00000474421 TLK2Q86UE8 772 aa23.86■■□□□ 1.41
PDLIM4-206ENST00000474421 PNMA1Q8ND90 353 aa23.86■■□□□ 1.41
PDLIM4-206ENST00000474421 ZSCAN10Q96SZ4 725 aaPredicted RBP23.86■■□□□ 1.41
PDLIM4-206ENST00000474421 MPHOSPH6Q99547 160 aaKnown RBP23.86■■□□□ 1.41
PDLIM4-206ENST00000474421 GNEQ9Y223 722 aaKnown RBP23.86■■□□□ 1.41
PDLIM4-206ENST00000474421 Q9Y3F1 56 aa23.86■■□□□ 1.41
PDLIM4-206ENST00000474421 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.85■■□□□ 1.41
PDLIM4-206ENST00000474421 B4E1Z4 1266 aa23.85■■□□□ 1.41
PDLIM4-206ENST00000474421 NFIBO00712 420 aa23.85■■□□□ 1.41
PDLIM4-206ENST00000474421 CABYRO75952 493 aa23.85■■□□□ 1.41
PDLIM4-206ENST00000474421 SHHQ15465 462 aa23.85■■□□□ 1.41
PDLIM4-206ENST00000474421 FAM109BQ6ICB4 259 aaPredicted RBP23.85■■□□□ 1.41
PDLIM4-206ENST00000474421 RAD50Q92878 1312 aa23.84■■□□□ 1.41
PDLIM4-206ENST00000474421 ARVCFO00192 962 aa23.84■■□□□ 1.41
PDLIM4-206ENST00000474421 CTAGE5O15320 804 aa23.84■■□□□ 1.41
PDLIM4-206ENST00000474421 PDE4AP27815 886 aa23.84■■□□□ 1.41
PDLIM4-206ENST00000474421 CDK7P50613 346 aa23.84■■□□□ 1.41
PDLIM4-206ENST00000474421 ALDH5A1P51649 535 aaPredicted RBP23.84■■□□□ 1.41
PDLIM4-206ENST00000474421 FSCN1Q16658 493 aaKnown RBP23.84■■□□□ 1.41
PDLIM4-206ENST00000474421 TAPT1Q6NXT6 567 aa23.84■■□□□ 1.41
PDLIM4-206ENST00000474421 RNF207Q6ZRF8 634 aa23.84■■□□□ 1.41
PDLIM4-206ENST00000474421 FBXO16Q8IX29 292 aaPredicted RBP23.84■■□□□ 1.41
PDLIM4-206ENST00000474421 RUFY2Q8WXA3 655 aa23.84■■□□□ 1.41
PDLIM4-206ENST00000474421 CLEC4DQ8WXI8 215 aa23.84■■□□□ 1.41
PDLIM4-206ENST00000474421 UBAC1Q9BSL1 405 aa23.84■■□□□ 1.41
PDLIM4-206ENST00000474421 SEZ6LQ9BYH1 1024 aa23.84■■□□□ 1.41
PDLIM4-206ENST00000474421 MAF1Q9H063 256 aa23.84■■□□□ 1.41
PDLIM4-206ENST00000474421 ZSWIM5Q9P217 1185 aa23.84■■□□□ 1.41
PDLIM4-206ENST00000474421 B4DLN1 442 aa23.83■■□□□ 1.41
PDLIM4-206ENST00000474421 SMPD1P17405 629 aa23.83■■□□□ 1.41
PDLIM4-206ENST00000474421 MRPL12P52815 198 aaKnown RBP23.83■■□□□ 1.41
PDLIM4-206ENST00000474421 IRX5P78411 483 aaPredicted RBP23.83■■□□□ 1.41
PDLIM4-206ENST00000474421 ASPRV1Q53RT3 343 aa23.83■■□□□ 1.41
PDLIM4-206ENST00000474421 Q7L0L9 218 aa23.83■■□□□ 1.41
PDLIM4-206ENST00000474421 EEPD1Q7L9B9 569 aa23.83■■□□□ 1.41
PDLIM4-206ENST00000474421 ENAHQ8N8S7 591 aaPredicted RBP23.83■■□□□ 1.41
PDLIM4-206ENST00000474421 MTMR10Q9NXD2 777 aa23.83■■□□□ 1.41
PDLIM4-206ENST00000474421 COL6A3P12111 3177 aa23.83■■□□□ 1.41
PDLIM4-206ENST00000474421 TLR3O15455 904 aaKnown RBP23.82■■□□□ 1.4
PDLIM4-206ENST00000474421 DYNC1LI2O43237 492 aaPredicted RBP23.82■■□□□ 1.4
PDLIM4-206ENST00000474421 GOLGA8HP0CJ92 632 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 266.1 ms