RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 NKX3-2P78367 333 aa18.56■□□□□ 0.56
CDPF1-205ENST00000474256 KCNA10Q16322 511 aa18.56■□□□□ 0.56
CDPF1-205ENST00000474256 IMMTQ16891 758 aaKnown RBP18.56■□□□□ 0.56
CDPF1-205ENST00000474256 TTC22Q5TAA0 569 aa18.56■□□□□ 0.56
CDPF1-205ENST00000474256 ANKS1AQ92625 1134 aa18.56■□□□□ 0.56
CDPF1-205ENST00000474256 ZKSCAN3Q9BRR0 538 aa18.56■□□□□ 0.56
CDPF1-205ENST00000474256 UPF3AQ9H1J1 476 aaKnown RBP18.56■□□□□ 0.56
CDPF1-205ENST00000474256 PRDM5Q9NQX1 630 aaPredicted RBP18.56■□□□□ 0.56
CDPF1-205ENST00000474256 CTNNA3Q9UI47 895 aa18.56■□□□□ 0.56
CDPF1-205ENST00000474256 TRIM43BA6NCK2 446 aa18.55■□□□□ 0.56
CDPF1-205ENST00000474256 IRX5P78411 483 aaPredicted RBP18.55■□□□□ 0.56
CDPF1-205ENST00000474256 IRX6P78412 446 aaPredicted RBP18.55■□□□□ 0.56
CDPF1-205ENST00000474256 CCDC178Q5BJE1 867 aa18.55■□□□□ 0.56
CDPF1-205ENST00000474256 NSMFQ6X4W1 530 aa18.55■□□□□ 0.56
CDPF1-205ENST00000474256 SH3RF1Q7Z6J0 888 aa18.55■□□□□ 0.56
CDPF1-205ENST00000474256 IQCA1Q86XH1 822 aa18.55■□□□□ 0.56
CDPF1-205ENST00000474256 NUP133Q8WUM0 1156 aa18.55■□□□□ 0.56
CDPF1-205ENST00000474256 TRIM43Q96BQ3 446 aaPredicted RBP18.55■□□□□ 0.56
CDPF1-205ENST00000474256 SPC25Q9HBM1 224 aa18.55■□□□□ 0.56
CDPF1-205ENST00000474256 STARD7Q9NQZ5 370 aa18.55■□□□□ 0.56
CDPF1-205ENST00000474256 PNMA2Q9UL42 364 aa18.55■□□□□ 0.56
CDPF1-205ENST00000474256 CTAGE5O15320 804 aa18.54■□□□□ 0.56
CDPF1-205ENST00000474256 C6orf222P0C671 652 aaPredicted RBP18.54■□□□□ 0.56
CDPF1-205ENST00000474256 GPATCH4Q5T3I0 446 aaKnown RBP18.54■□□□□ 0.56
CDPF1-205ENST00000474256 ANKRD33Q7Z3H0 272 aa18.54■□□□□ 0.56
CDPF1-205ENST00000474256 PCSK9Q8NBP7 692 aaKnown RBP18.54■□□□□ 0.56
CDPF1-205ENST00000474256 MORC4Q8TE76 937 aa18.54■□□□□ 0.56
CDPF1-205ENST00000474256 TOX2Q96NM4 488 aa18.54■□□□□ 0.56
CDPF1-205ENST00000474256 PURBQ96QR8 312 aaKnown RBP18.54■□□□□ 0.56
CDPF1-205ENST00000474256 ZSCAN10Q96SZ4 725 aaPredicted RBP18.54■□□□□ 0.56
CDPF1-205ENST00000474256 ZSWIM5Q9P217 1185 aa18.54■□□□□ 0.56
CDPF1-205ENST00000474256 ELP1O95163 1332 aa18.53■□□□□ 0.56
CDPF1-205ENST00000474256 WDR19Q8NEZ3 1342 aa18.53■□□□□ 0.56
CDPF1-205ENST00000474256 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.53■□□□□ 0.56
CDPF1-205ENST00000474256 B4E1Z4 1266 aa18.53■□□□□ 0.56
CDPF1-205ENST00000474256 NFIBO00712 420 aa18.53■□□□□ 0.56
CDPF1-205ENST00000474256 CLTBP09497 229 aa18.53■□□□□ 0.56
CDPF1-205ENST00000474256 TNFAIP2Q03169 654 aa18.53■□□□□ 0.56
CDPF1-205ENST00000474256 BAATQ14032 418 aaPredicted RBP18.53■□□□□ 0.56
CDPF1-205ENST00000474256 PNMA1Q8ND90 353 aa18.53■□□□□ 0.56
CDPF1-205ENST00000474256 CLEC4DQ8WXI8 215 aa18.53■□□□□ 0.56
CDPF1-205ENST00000474256 BADQ92934 168 aa18.53■□□□□ 0.56
CDPF1-205ENST00000474256 GNEQ9Y223 722 aaKnown RBP18.53■□□□□ 0.56
CDPF1-205ENST00000474256 DDX49Q9Y6V7 483 aaKnown RBP18.53■□□□□ 0.56
CDPF1-205ENST00000474256 RAD50Q92878 1312 aa18.52■□□□□ 0.56
CDPF1-205ENST00000474256 PQBP1O60828 265 aaKnown RBP18.52■□□□□ 0.56
CDPF1-205ENST00000474256 ASGR1P07306 291 aa18.52■□□□□ 0.56
CDPF1-205ENST00000474256 GOLGA8HP0CJ92 632 aa18.52■□□□□ 0.56
CDPF1-205ENST00000474256 ITGB8P26012 769 aa18.52■□□□□ 0.56
CDPF1-205ENST00000474256 GNASQ5JWF2 1037 aa18.52■□□□□ 0.56
CDPF1-205ENST00000474256 TAPT1Q6NXT6 567 aa18.52■□□□□ 0.56
CDPF1-205ENST00000474256 ENAHQ8N8S7 591 aaPredicted RBP18.52■□□□□ 0.56
CDPF1-205ENST00000474256 GLT1D1Q96MS3 346 aa18.52■□□□□ 0.56
CDPF1-205ENST00000474256 KRT23Q9C075 422 aa18.52■□□□□ 0.56
CDPF1-205ENST00000474256 KAT14Q9H8E8 782 aa18.52■□□□□ 0.56
CDPF1-205ENST00000474256 LOC102724159A0A0B4J2E5 919 aa18.51■□□□□ 0.55
CDPF1-205ENST00000474256 KIAA0355O15063 1070 aa18.51■□□□□ 0.55
CDPF1-205ENST00000474256 SMPD1P17405 629 aa18.51■□□□□ 0.55
CDPF1-205ENST00000474256 CDK7P50613 346 aa18.51■□□□□ 0.55
CDPF1-205ENST00000474256 FAAP100Q0VG06 881 aa18.51■□□□□ 0.55
CDPF1-205ENST00000474256 PWP2Q15269 919 aaKnown RBP18.51■□□□□ 0.55
CDPF1-205ENST00000474256 FBXO16Q8IX29 292 aaPredicted RBP18.51■□□□□ 0.55
CDPF1-205ENST00000474256 UBA5Q9GZZ9 404 aa18.51■□□□□ 0.55
CDPF1-205ENST00000474256 CNNM2Q9H8M5 875 aa18.51■□□□□ 0.55
CDPF1-205ENST00000474256 VTA1Q9NP79 307 aa18.51■□□□□ 0.55
CDPF1-205ENST00000474256 PDGFCQ9NRA1 345 aa18.51■□□□□ 0.55
CDPF1-205ENST00000474256 ADD3Q9UEY8 706 aaKnown RBP18.51■□□□□ 0.55
CDPF1-205ENST00000474256 TNKSO95271 1327 aa18.5■□□□□ 0.55
CDPF1-205ENST00000474256 PTPDC1A2A3K4 754 aa18.5■□□□□ 0.55
CDPF1-205ENST00000474256 CHMLP26374 656 aa18.5■□□□□ 0.55
CDPF1-205ENST00000474256 ALDH5A1P51649 535 aaPredicted RBP18.5■□□□□ 0.55
CDPF1-205ENST00000474256 IQSEC1Q6DN90 963 aa18.5■□□□□ 0.55
CDPF1-205ENST00000474256 SLC30A10Q6XR72 485 aa18.5■□□□□ 0.55
CDPF1-205ENST00000474256 EEPD1Q7L9B9 569 aa18.5■□□□□ 0.55
CDPF1-205ENST00000474256 CPVLQ9H3G5 476 aa18.5■□□□□ 0.55
CDPF1-205ENST00000474256 Q9Y3F1 56 aa18.5■□□□□ 0.55
CDPF1-205ENST00000474256 LTBP2Q14767 1821 aa18.49■□□□□ 0.55
CDPF1-205ENST00000474256 DCDC2CA8MYV0 355 aa18.49■□□□□ 0.55
CDPF1-205ENST00000474256 BEX3Q00994 111 aa18.49■□□□□ 0.55
CDPF1-205ENST00000474256 ASPRV1Q53RT3 343 aa18.49■□□□□ 0.55
CDPF1-205ENST00000474256 RNF207Q6ZRF8 634 aa18.49■□□□□ 0.55
CDPF1-205ENST00000474256 NOL8Q76FK4 1167 aaKnown RBP18.49■□□□□ 0.55
CDPF1-205ENST00000474256 TLK2Q86UE8 772 aa18.49■□□□□ 0.55
CDPF1-205ENST00000474256 RUFY2Q8WXA3 655 aa18.49■□□□□ 0.55
CDPF1-205ENST00000474256 TMEM39AQ9NV64 488 aa18.49■□□□□ 0.55
CDPF1-205ENST00000474256 LAMA4Q16363 1823 aa18.49■□□□□ 0.55
CDPF1-205ENST00000474256 MROH7Q68CQ1 1323 aa18.49■□□□□ 0.55
CDPF1-205ENST00000474256 A0A0U1RQG5 324 aaPredicted RBP18.48■□□□□ 0.55
CDPF1-205ENST00000474256 CALML3P27482 149 aa18.48■□□□□ 0.55
CDPF1-205ENST00000474256 RPS6P62753 249 aaKnown RBP18.48■□□□□ 0.55
CDPF1-205ENST00000474256 SHHQ15465 462 aa18.48■□□□□ 0.55
CDPF1-205ENST00000474256 C9orf50Q5SZB4 431 aa18.48■□□□□ 0.55
CDPF1-205ENST00000474256 TMEM63BQ5T3F8 832 aa18.48■□□□□ 0.55
CDPF1-205ENST00000474256 ADGRF4Q8IZF3 695 aa18.48■□□□□ 0.55
CDPF1-205ENST00000474256 DEFB123Q8N688 67 aa18.48■□□□□ 0.55
CDPF1-205ENST00000474256 RGS22Q8NE09 1264 aa18.48■□□□□ 0.55
CDPF1-205ENST00000474256 UBAC1Q9BSL1 405 aa18.48■□□□□ 0.55
CDPF1-205ENST00000474256 MAF1Q9H063 256 aa18.48■□□□□ 0.55
CDPF1-205ENST00000474256 ARVCFO00192 962 aa18.47■□□□□ 0.55
CDPF1-205ENST00000474256 DYNC1LI2O43237 492 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms