RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 RASGRP2Q7LDG7 609 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 CCDC83Q8IWF9 413 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 SCUBE3Q8IX30 993 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 CMTR1Q8N1G2 835 aaKnown RBP8.82□□□□□ -1
CCDC93-207ENST00000474006 CTCFLQ8NI51 663 aaPredicted RBP8.82□□□□□ -1
CCDC93-207ENST00000474006 DCAF4Q8WV16 495 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 LPAR1Q92633 364 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 THAP11Q96EK4 314 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 GMCL1Q96IK5 515 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 WNK4Q96J92 1243 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 USB1Q9BQ65 265 aaKnown RBP8.82□□□□□ -1
CCDC93-207ENST00000474006 UBA5Q9GZZ9 404 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 RBM28Q9NW13 759 aaKnown RBP8.82□□□□□ -1
CCDC93-207ENST00000474006 TMOD4Q9NZQ9 345 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 KCNH4Q9UQ05 1017 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 DDX60LQ5H9U9 1706 aaKnown RBP8.82□□□□□ -1
CCDC93-207ENST00000474006 BAZ2AQ9UIF9 1905 aaKnown RBP8.82□□□□□ -1
CCDC93-207ENST00000474006 FRMPD2Q68DX3 1309 aaPredicted RBP8.81□□□□□ -1
CCDC93-207ENST00000474006 A0A0G2JLL6 359 aaPredicted RBP8.81□□□□□ -1
CCDC93-207ENST00000474006 TMEM232C9JQI7 657 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 KLRF2D3W0D1 207 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 DHX16O60231 1041 aaKnown RBP8.81□□□□□ -1
CCDC93-207ENST00000474006 DTNBO60941 627 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 PPFIA3O75145 1194 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 SLC16A2P36021 539 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 GNAQP50148 359 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 ST3GAL1Q11201 340 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 SNAPC2Q13487 334 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 CUL4AQ13619 759 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 NTRK3Q16288 839 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 CCDC96Q2M329 555 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 ASPRV1Q53RT3 343 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 FAM83BQ5T0W9 1011 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 GPATCH4Q5T3I0 446 aaKnown RBP8.81□□□□□ -1
CCDC93-207ENST00000474006 BLOC1S3Q6QNY0 202 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 FASTKD5Q7L8L6 764 aaKnown RBP8.81□□□□□ -1
CCDC93-207ENST00000474006 PRRT2Q7Z6L0 340 aaPredicted RBP8.81□□□□□ -1
CCDC93-207ENST00000474006 NBPF11Q86T75 865 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 SRBD1Q8N5C6 995 aaKnown RBP8.81□□□□□ -1
CCDC93-207ENST00000474006 GTF3C6Q969F1 213 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 HHIPL1Q96JK4 782 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 C12orf42Q96LP6 360 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 LZTS2Q9BRK4 669 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 KRTAP3-3Q9BYR6 98 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 KRTAP3-2Q9BYR7 98 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 RPAP3Q9H6T3 665 aaPredicted RBP8.81□□□□□ -1
CCDC93-207ENST00000474006 VAT1LQ9HCJ6 419 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 ISY1Q9ULR0 285 aaKnown RBP8.81□□□□□ -1
CCDC93-207ENST00000474006 NAV1Q8NEY1 1877 aa8.81□□□□□ -1
CCDC93-207ENST00000474006 FOCADQ5VW36 1801 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 ECM29Q5VYK3 1845 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 MYH1P12882 1939 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 CPLX1O14810 134 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 PLEKHA8P1O95397 391 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 FMNL1O95466 1100 aaPredicted RBP8.8□□□□□ -1
CCDC93-207ENST00000474006 CTDNEP1O95476 244 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 ZBTB48P10074 688 aaPredicted RBP8.8□□□□□ -1
CCDC93-207ENST00000474006 VCAM1P19320 739 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 SMARCA1P28370 1054 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 GTF2A2P52657 109 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 MOGSQ13724 837 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 SLC35G1Q2M3R5 365 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 DEFB115Q30KQ5 88 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 TREML2Q5T2D2 321 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 GADL1Q6ZQY3 521 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 CATSPERGQ6ZRH7 1159 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 TMTC3Q6ZXV5 915 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 RASAL3Q86YV0 1011 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 CHURC1Q8WUH1 139 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 LLPHQ9BRT6 129 aaKnown RBP8.8□□□□□ -1
CCDC93-207ENST00000474006 CPVLQ9H3G5 476 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 FEM1BQ9UK73 627 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 V9GY48 417 aaPredicted RBP8.8□□□□□ -1
CCDC93-207ENST00000474006 SIPA1L1O43166 1804 aa8.8□□□□□ -1
CCDC93-207ENST00000474006 CDK5RAP2Q96SN8 1893 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 CCL15-CCL14A0A0B4J2E2 113 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 POM121CA8CG34 1229 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 FAM155AB1AL88 458 aaPredicted RBP8.79□□□□□ -1
CCDC93-207ENST00000474006 USP17L15C9J2P7 530 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 USP17L13C9JLJ4 530 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 USP17L11C9JVI0 530 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 USP17L18D6R9N7 530 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 USP17L22D6RA61 530 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 USP17L17D6RBQ6 530 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 USP17L19D6RCP7 530 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 USP17L20D6RJB6 530 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 WDR46O15213 610 aaKnown RBP8.79□□□□□ -1
CCDC93-207ENST00000474006 CYTH3O43739 400 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 JAK2O60674 1132 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 PLA2G6O60733 806 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 CETPP11597 493 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 IFNAR1P17181 557 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 SSRP1Q08945 709 aaKnown RBP8.79□□□□□ -1
CCDC93-207ENST00000474006 USP17L24Q0WX57 530 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 IKQ13123 557 aaPredicted RBP8.79□□□□□ -1
CCDC93-207ENST00000474006 COG2Q14746 738 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 CCL15Q16663 113 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 CYP4F22Q6NT55 531 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 GPAT2Q6NUI2 795 aa8.79□□□□□ -1
CCDC93-207ENST00000474006 CPLX2Q6PUV4 134 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms