RNA–Protein interactions for RNA: ENST00000473101.1

RGPD6-208, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-208ENST00000473101 DDX42Q86XP3 938 aaKnown RBP eCLIP4.9□□□□□ -1.63
RGPD6-208ENST00000473101 AHI1Q8N157 1196 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 ARHGEF39Q8N4T4 335 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 UBR7Q8N806 425 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 ADCY4Q8NFM4 1077 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 DNAJB8Q8NHS0 232 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 OSBP2Q969R2 916 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 MRGPRX3Q96LB0 322 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 MIPEPQ99797 713 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 IER2Q9BTL4 223 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 LGR4Q9BXB1 951 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 ASPNQ9BXN1 380 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 CHPF2Q9P2E5 772 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 SFMBT1Q9UHJ3 866 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 FBXL21Q9UKT6 434 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 EMC9Q9Y3B6 208 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 PCDHB12Q9Y5F1 795 aa4.9□□□□□ -1.63
RGPD6-208ENST00000473101 GNAT3A8MTJ3 354 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 GSG1L2A8MUP6 293 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 ALG1L2C9J202 215 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 TBX1O43435 398 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 EFCAB14O75071 495 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 CAPNS1P04632 268 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 PMLP29590 882 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 CDKN1CP49918 316 aaPredicted RBP4.89□□□□□ -1.63
RGPD6-208ENST00000473101 EVA1CP58658 441 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 EXOSC10Q01780 885 aaKnown RBP4.89□□□□□ -1.63
RGPD6-208ENST00000473101 HSP90AB2PQ58FF8 381 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 ODR4Q5SWX8 454 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 SLC23A3Q6PIS1 610 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 DDX46Q7L014 1031 aaKnown RBP4.89□□□□□ -1.63
RGPD6-208ENST00000473101 FAM214BQ7L5A3 538 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 RNF180Q86T96 592 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 TRIM59Q8IWR1 403 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 SPACA3Q8IXA5 215 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 PPM1KQ8N3J5 372 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 JDP2Q8WYK2 163 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 KCTD13Q8WZ19 329 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 DDX1Q92499 740 aaKnown RBP4.89□□□□□ -1.63
RGPD6-208ENST00000473101 VWCEQ96DN2 955 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 CCDC140Q96MF4 163 aa4.89□□□□□ -1.63
RGPD6-208ENST00000473101 TARS2Q9BW92 718 aaKnown RBP4.89□□□□□ -1.63
RGPD6-208ENST00000473101 DIS3Q9Y2L1 958 aaKnown RBP4.89□□□□□ -1.63
RGPD6-208ENST00000473101 SHOXO15266 292 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 KCNH1O95259 989 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 APPP05067 770 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 SDSP20132 328 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 POU3F3P20264 500 aaPredicted RBP4.88□□□□□ -1.63
RGPD6-208ENST00000473101 CYP7A1P22680 504 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 HOXC12P31275 282 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 ZNF445P59923 1031 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 GABREP78334 506 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 ZP2Q05996 745 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 NKPD1Q17RQ9 610 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 NBPF9Q3BBW0 867 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 TRIM61Q5EBN2 209 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 CDH24Q86UP0 819 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 ATL2Q8NHH9 583 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 RIN3Q8TB24 985 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 SYTL5Q8TDW5 730 aaPredicted RBP4.88□□□□□ -1.63
RGPD6-208ENST00000473101 RNF141Q8WVD5 230 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 ASB11Q8WXH4 323 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 PRDM5Q9NQX1 630 aaPredicted RBP4.88□□□□□ -1.63
RGPD6-208ENST00000473101 CGGBP1Q9UFW8 167 aaPredicted RBP4.88□□□□□ -1.63
RGPD6-208ENST00000473101 NDOR1Q9UHB4 597 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 SNX11Q9Y5W9 270 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 FHOD1Q9Y613 1164 aa4.88□□□□□ -1.63
RGPD6-208ENST00000473101 IGF2BP3O00425 579 aaKnown RBP eCLIP4.87□□□□□ -1.63
RGPD6-208ENST00000473101 DLX3O60479 287 aa4.87□□□□□ -1.63
RGPD6-208ENST00000473101 FARP2O94887 1054 aaPredicted RBP4.87□□□□□ -1.63
RGPD6-208ENST00000473101 SLITRK5O94991 958 aa4.87□□□□□ -1.63
RGPD6-208ENST00000473101 EOMESO95936 686 aa4.87□□□□□ -1.63
RGPD6-208ENST00000473101 KCNJ6P48051 423 aa4.87□□□□□ -1.63
RGPD6-208ENST00000473101 PPP2R5DQ14738 602 aa4.87□□□□□ -1.63
RGPD6-208ENST00000473101 BRDTQ58F21 947 aaPredicted RBP4.87□□□□□ -1.63
RGPD6-208ENST00000473101 GTF2IRD2BQ6EKJ0 949 aa4.87□□□□□ -1.63
RGPD6-208ENST00000473101 GTF2IRD2Q86UP8 949 aa4.87□□□□□ -1.63
RGPD6-208ENST00000473101 AFAP1L2Q8N4X5 818 aa4.87□□□□□ -1.63
RGPD6-208ENST00000473101 LEO1Q8WVC0 666 aaPredicted RBP4.87□□□□□ -1.63
RGPD6-208ENST00000473101 BTN2A2Q8WVV5 523 aa4.87□□□□□ -1.63
RGPD6-208ENST00000473101 PTPRN2Q92932 1015 aa4.87□□□□□ -1.63
RGPD6-208ENST00000473101 BRF1Q92994 677 aa4.87□□□□□ -1.63
RGPD6-208ENST00000473101 DSCC1Q9BVC3 393 aa4.87□□□□□ -1.63
RGPD6-208ENST00000473101 FAM126AQ9BYI3 521 aaPredicted RBP4.87□□□□□ -1.63
RGPD6-208ENST00000473101 PRDM14Q9GZV8 571 aa4.87□□□□□ -1.63
RGPD6-208ENST00000473101 NOL6Q9H6R4 1146 aaKnown RBP4.87□□□□□ -1.63
RGPD6-208ENST00000473101 TRIM39Q9HCM9 518 aa4.87□□□□□ -1.63
RGPD6-208ENST00000473101 PRR13Q9NZ81 148 aa4.87□□□□□ -1.63
RGPD6-208ENST00000473101 TCEAL9Q9UHQ7 104 aa4.87□□□□□ -1.63
RGPD6-208ENST00000473101 TPX2Q9ULW0 747 aaKnown RBP4.87□□□□□ -1.63
RGPD6-208ENST00000473101 SF3B6Q9Y3B4 125 aaKnown RBP4.87□□□□□ -1.63
RGPD6-208ENST00000473101 PRR33A8MZF0 331 aa4.86□□□□□ -1.63
RGPD6-208ENST00000473101 FAM155AB1AL88 458 aaPredicted RBP4.86□□□□□ -1.63
RGPD6-208ENST00000473101 OPA1O60313 960 aa4.86□□□□□ -1.63
RGPD6-208ENST00000473101 DNAJC8O75937 253 aaPredicted RBP4.86□□□□□ -1.63
RGPD6-208ENST00000473101 NPTXRO95502 500 aa4.86□□□□□ -1.63
RGPD6-208ENST00000473101 CPP00450 1065 aa4.86□□□□□ -1.63
RGPD6-208ENST00000473101 ASLP04424 464 aa4.86□□□□□ -1.63
RGPD6-208ENST00000473101 SNRPB2P08579 225 aaKnown RBP4.86□□□□□ -1.63
RGPD6-208ENST00000473101 C6orf222P0C671 652 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms