RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 SMC3Q9UQE7 1217 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 RIPK3Q9Y572 518 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 COL11A1P12107 1806 aaPredicted RBP12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 PARP14Q460N5 1801 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 A0A0G2JMZ2 1700 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 PALM3A6NDB9 673 aaPredicted RBP12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 SLC15A5A6NIM6 579 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 CPLX1O14810 134 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 ATP2A1O14983 1001 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 ADCY3O60266 1144 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 ICAM1P05362 532 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 ADORA2AP29274 412 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 PDIA3P30101 505 aaKnown RBP12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 RGS2P41220 211 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 GNAQP50148 359 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 APOA5Q6Q788 366 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 DPP9Q86TI2 863 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 CCDC82Q8N4S0 544 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 FANCBQ8NB91 859 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 SPRYD3Q8NCJ5 442 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 DDX11Q96FC9 970 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 TRERF1Q96PN7 1200 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 LARP6Q9BRS8 491 aaKnown RBP12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 JMJD4Q9H9V9 463 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 FBXO40Q9UH90 709 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 COL6A3P12111 3177 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 MGAMO43451 1857 aa12.22□□□□□ -0.45
SMARCD3-208ENST00000472789 DOCK3Q8IZD9 2030 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 ZNF536O15090 1300 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 STRNO43815 780 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 PLEKHA8P1O95397 391 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 ELNP15502 786 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 PDCP20941 246 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 GRK4P32298 578 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 METAP2P50579 478 aaKnown RBP eCLIP12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 NUCB2P80303 420 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 HMGN5P82970 282 aaKnown RBP12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 MAP2K5Q13163 448 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 STK3Q13188 491 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 RTN1Q16799 776 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 QRICH1Q2TAL8 776 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 TKFCQ3LXA3 575 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 MORN1Q5T089 497 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 NSMFQ6X4W1 530 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 FBXO11Q86XK2 927 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 CCDC83Q8IWF9 413 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 CMTR1Q8N1G2 835 aaKnown RBP12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 ANKRD35Q8N283 1001 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 CHST13Q8NET6 341 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 SH3TC2Q8TF17 1288 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 GTF3C6Q969F1 213 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 PIGSQ96S52 555 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 LZTS2Q9BRK4 669 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 ACAD9Q9H845 621 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 SLC5A4Q9NY91 659 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 CHMP5Q9NZZ3 219 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 GJD2Q9UKL4 321 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 PNMA2Q9UL42 364 aa12.21□□□□□ -0.45
SMARCD3-208ENST00000472789 BAZ2BQ9UIF8 2168 aaKnown RBP12.2□□□□□ -0.46
SMARCD3-208ENST00000472789 RBBP6Q7Z6E9 1792 aaKnown RBP12.2□□□□□ -0.46
SMARCD3-208ENST00000472789 ZBTB5O15062 677 aa12.2□□□□□ -0.46
SMARCD3-208ENST00000472789 PGK2P07205 417 aa12.2□□□□□ -0.46
SMARCD3-208ENST00000472789 IRF5Q13568 498 aa12.2□□□□□ -0.46
SMARCD3-208ENST00000472789 GRB14Q14449 540 aa12.2□□□□□ -0.46
SMARCD3-208ENST00000472789 MUM1L1Q5H9M0 696 aa12.2□□□□□ -0.46
SMARCD3-208ENST00000472789 NBPF11Q86T75 865 aa12.2□□□□□ -0.46
SMARCD3-208ENST00000472789 SLAIN1Q8ND83 568 aa12.2□□□□□ -0.46
SMARCD3-208ENST00000472789 RRP36Q96EU6 259 aaKnown RBP12.2□□□□□ -0.46
SMARCD3-208ENST00000472789 MAP3K14Q99558 947 aa12.2□□□□□ -0.46
SMARCD3-208ENST00000472789 APBA2Q99767 749 aa12.2□□□□□ -0.46
SMARCD3-208ENST00000472789 RBM28Q9NW13 759 aaKnown RBP12.2□□□□□ -0.46
SMARCD3-208ENST00000472789 SEC63Q9UGP8 760 aaKnown RBP12.2□□□□□ -0.46
SMARCD3-208ENST00000472789 TRIOBPQ9H2D6 2365 aa12.2□□□□□ -0.46
SMARCD3-208ENST00000472789 PTPDC1A2A3K4 754 aa12.19□□□□□ -0.46
SMARCD3-208ENST00000472789 COBLO75128 1261 aa12.19□□□□□ -0.46
SMARCD3-208ENST00000472789 TMTC3Q6ZXV5 915 aa12.19□□□□□ -0.46
SMARCD3-208ENST00000472789 ABRAQ8N0Z2 381 aa12.19□□□□□ -0.46
SMARCD3-208ENST00000472789 SRBD1Q8N5C6 995 aaKnown RBP12.19□□□□□ -0.46
SMARCD3-208ENST00000472789 NECAB1Q8N987 351 aa12.19□□□□□ -0.46
SMARCD3-208ENST00000472789 FAM184AQ8NB25 1140 aa12.19□□□□□ -0.46
SMARCD3-208ENST00000472789 AMNQ9BXJ7 453 aa12.19□□□□□ -0.46
SMARCD3-208ENST00000472789 RIOX1Q9H6W3 641 aa12.19□□□□□ -0.46
SMARCD3-208ENST00000472789 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
SMARCD3-208ENST00000472789 LAMA3Q16787 3333 aa12.19□□□□□ -0.46
SMARCD3-208ENST00000472789 ABCB11O95342 1321 aa12.18□□□□□ -0.46
SMARCD3-208ENST00000472789 PNMA6FA0A0J9YX94 578 aa12.18□□□□□ -0.46
SMARCD3-208ENST00000472789 hCG_1642624A0A1W2PR95 340 aa12.18□□□□□ -0.46
SMARCD3-208ENST00000472789 CYTH3O43739 400 aa12.18□□□□□ -0.46
SMARCD3-208ENST00000472789 INHAP05111 366 aa12.18□□□□□ -0.46
SMARCD3-208ENST00000472789 EN2P19622 333 aaPredicted RBP12.18□□□□□ -0.46
SMARCD3-208ENST00000472789 FXR1P51114 621 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMARCD3-208ENST00000472789 UBXN2AP68543 259 aa12.18□□□□□ -0.46
SMARCD3-208ENST00000472789 CCT2P78371 535 aaKnown RBP12.18□□□□□ -0.46
SMARCD3-208ENST00000472789 SCRN1Q12765 414 aa12.18□□□□□ -0.46
SMARCD3-208ENST00000472789 CCL14Q16627 93 aa12.18□□□□□ -0.46
SMARCD3-208ENST00000472789 SLC35G1Q2M3R5 365 aa12.18□□□□□ -0.46
SMARCD3-208ENST00000472789 NPLOC4Q8TAT6 608 aa12.18□□□□□ -0.46
SMARCD3-208ENST00000472789 TRIB2Q92519 343 aa12.18□□□□□ -0.46
SMARCD3-208ENST00000472789 USP6NLQ92738 828 aa12.18□□□□□ -0.46
SMARCD3-208ENST00000472789 SPZ1Q9BXG8 430 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms