RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 ARNTLO00327 626 aa8.56□□□□□ -1.04
CLK1-209ENST00000472679 PRODHO43272 600 aa8.56□□□□□ -1.04
CLK1-209ENST00000472679 DLX3O60479 287 aa8.56□□□□□ -1.04
CLK1-209ENST00000472679 HPXP02790 462 aa8.56□□□□□ -1.04
CLK1-209ENST00000472679 SCG5P05408 212 aa8.56□□□□□ -1.04
CLK1-209ENST00000472679 KCNJ6P48051 423 aa8.56□□□□□ -1.04
CLK1-209ENST00000472679 FYB2Q5VWT5 728 aa8.56□□□□□ -1.04
CLK1-209ENST00000472679 ZBTB38Q8NAP3 1195 aaPredicted RBP8.56□□□□□ -1.04
CLK1-209ENST00000472679 KREMEN2Q8NCW0 462 aa8.56□□□□□ -1.04
CLK1-209ENST00000472679 FRS2Q8WU20 508 aa8.56□□□□□ -1.04
CLK1-209ENST00000472679 OSBP2Q969R2 916 aa8.56□□□□□ -1.04
CLK1-209ENST00000472679 CCDC120Q96HB5 630 aa8.56□□□□□ -1.04
CLK1-209ENST00000472679 TNFRSF10DQ9UBN6 386 aa8.56□□□□□ -1.04
CLK1-209ENST00000472679 TRAV20A0A0B4J274 112 aa8.55□□□□□ -1.04
CLK1-209ENST00000472679 PABPC1P11940 636 aaKnown RBP8.55□□□□□ -1.04
CLK1-209ENST00000472679 PLS3P13797 630 aa8.55□□□□□ -1.04
CLK1-209ENST00000472679 KIR2DL1P43626 348 aaPredicted RBP8.55□□□□□ -1.04
CLK1-209ENST00000472679 KIR2DL2P43627 348 aaPredicted RBP8.55□□□□□ -1.04
CLK1-209ENST00000472679 CEP128Q6ZU80 1094 aa8.55□□□□□ -1.04
CLK1-209ENST00000472679 ANKS4BQ8N8V4 417 aa8.55□□□□□ -1.04
CLK1-209ENST00000472679 JMYQ8N9B5 988 aa8.55□□□□□ -1.04
CLK1-209ENST00000472679 FLAD1Q8NFF5 587 aa8.55□□□□□ -1.04
CLK1-209ENST00000472679 NPLOC4Q8TAT6 608 aa8.55□□□□□ -1.04
CLK1-209ENST00000472679 C1orf159Q96HA4 380 aa8.55□□□□□ -1.04
CLK1-209ENST00000472679 JMJD8Q96S16 334 aa8.55□□□□□ -1.04
CLK1-209ENST00000472679 TMEFF2Q9UIK5 374 aaPredicted RBP8.55□□□□□ -1.04
CLK1-209ENST00000472679 PSPNO60542 156 aa8.54□□□□□ -1.04
CLK1-209ENST00000472679 FGFR1P11362 822 aa8.54□□□□□ -1.04
CLK1-209ENST00000472679 KIR3DS1Q14943 382 aa8.54□□□□□ -1.04
CLK1-209ENST00000472679 FAM209AQ5JX71 171 aa8.54□□□□□ -1.04
CLK1-209ENST00000472679 MBLAC2Q68D91 279 aa8.54□□□□□ -1.04
CLK1-209ENST00000472679 SLCO6A1Q86UG4 719 aa8.54□□□□□ -1.04
CLK1-209ENST00000472679 CPNE8Q86YQ8 564 aa8.54□□□□□ -1.04
CLK1-209ENST00000472679 KSR1Q8IVT5 923 aa8.54□□□□□ -1.04
CLK1-209ENST00000472679 CCDC140Q96MF4 163 aa8.54□□□□□ -1.04
CLK1-209ENST00000472679 CWC22Q9HCG8 908 aaKnown RBP8.54□□□□□ -1.04
CLK1-209ENST00000472679 FITM1A5D6W6 292 aa8.53□□□□□ -1.04
CLK1-209ENST00000472679 L1CAMP32004 1257 aa8.53□□□□□ -1.04
CLK1-209ENST00000472679 GALK1P51570 392 aa8.53□□□□□ -1.04
CLK1-209ENST00000472679 RTP1P59025 263 aa8.53□□□□□ -1.04
CLK1-209ENST00000472679 HSF5Q4G112 596 aaPredicted RBP8.53□□□□□ -1.04
CLK1-209ENST00000472679 SLC35F1Q5T1Q4 408 aa8.53□□□□□ -1.04
CLK1-209ENST00000472679 CYP2R1Q6VVX0 501 aa8.53□□□□□ -1.04
CLK1-209ENST00000472679 NSMFQ6X4W1 530 aa8.53□□□□□ -1.04
CLK1-209ENST00000472679 CCDC103Q8IW40 242 aa8.53□□□□□ -1.04
CLK1-209ENST00000472679 OXR1Q8N573 874 aa8.53□□□□□ -1.04
CLK1-209ENST00000472679 THAP3Q8WTV1 239 aaPredicted RBP8.53□□□□□ -1.04
CLK1-209ENST00000472679 MYLIPQ8WY64 445 aa8.53□□□□□ -1.04
CLK1-209ENST00000472679 EXOC2Q96KP1 924 aa8.53□□□□□ -1.04
CLK1-209ENST00000472679 PLCD4Q9BRC7 762 aa8.53□□□□□ -1.04
CLK1-209ENST00000472679 NPHP3-ACAD11A0A0J9YXS1 232 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 BLACEA4D250 179 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 NRDCO43847 1150 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 TBC1D8O95759 1140 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 CPP00450 1065 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 PAMP19021 973 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 CHRNEQ04844 493 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 MAP4K2Q12851 820 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 LAPTM5Q13571 262 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 NR0B2Q15466 257 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 SLC14A2Q15849 920 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 C2orf27AQ580R0 203 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 HLA-DQA1Q5Y7H0 255 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 ATG4DQ86TL0 474 aaPredicted RBP8.52□□□□□ -1.05
CLK1-209ENST00000472679 JAZF1Q86VZ6 243 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 SPPL2CQ8IUH8 684 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 SH3TC2Q8TF17 1288 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 KCTD13Q8WZ19 329 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 RNPC3Q96LT9 517 aaKnown RBP8.52□□□□□ -1.05
CLK1-209ENST00000472679 PTCH2Q9Y6C5 1203 aa8.52□□□□□ -1.05
CLK1-209ENST00000472679 PAPLNO95428 1278 aa8.51□□□□□ -1.05
CLK1-209ENST00000472679 RAC2P15153 192 aa8.51□□□□□ -1.05
CLK1-209ENST00000472679 AFMP43652 599 aa8.51□□□□□ -1.05
CLK1-209ENST00000472679 SQSTM1Q13501 440 aa8.51□□□□□ -1.05
CLK1-209ENST00000472679 NTRK3Q16288 839 aa8.51□□□□□ -1.05
CLK1-209ENST00000472679 INF2Q27J81 1249 aa8.51□□□□□ -1.05
CLK1-209ENST00000472679 GIMAP6Q6P9H5 292 aa8.51□□□□□ -1.05
CLK1-209ENST00000472679 SHISA4Q96DD7 197 aa8.51□□□□□ -1.05
CLK1-209ENST00000472679 CDC6Q99741 560 aa8.51□□□□□ -1.05
CLK1-209ENST00000472679 TRBV23-1A0A0A0MS06 115 aa8.5□□□□□ -1.05
CLK1-209ENST00000472679 A0A1W2PQ45 241 aaPredicted RBP8.5□□□□□ -1.05
CLK1-209ENST00000472679 A0A1W2PQY0 241 aa8.5□□□□□ -1.05
CLK1-209ENST00000472679 ITGB5P18084 799 aa8.5□□□□□ -1.05
CLK1-209ENST00000472679 IRAK1P51617 712 aa8.5□□□□□ -1.05
CLK1-209ENST00000472679 LONRF2Q1L5Z9 754 aa8.5□□□□□ -1.05
CLK1-209ENST00000472679 XP32Q5T750 250 aa8.5□□□□□ -1.05
CLK1-209ENST00000472679 NOP9Q86U38 636 aaKnown RBP8.5□□□□□ -1.05
CLK1-209ENST00000472679 JAMLQ86YT9 394 aa8.5□□□□□ -1.05
CLK1-209ENST00000472679 SCUBE1Q8IWY4 988 aa8.5□□□□□ -1.05
CLK1-209ENST00000472679 PPIL6Q8IXY8 311 aa8.5□□□□□ -1.05
CLK1-209ENST00000472679 ABHD4Q8TB40 342 aa8.5□□□□□ -1.05
CLK1-209ENST00000472679 KIRREL1Q96J84 757 aa8.5□□□□□ -1.05
CLK1-209ENST00000472679 MMP19Q99542 508 aa8.5□□□□□ -1.05
CLK1-209ENST00000472679 RNF32Q9H0A6 362 aa8.5□□□□□ -1.05
CLK1-209ENST00000472679 IMPACTQ9P2X3 320 aa8.5□□□□□ -1.05
CLK1-209ENST00000472679 GPR160Q9UJ42 338 aa8.5□□□□□ -1.05
CLK1-209ENST00000472679 MRPL42Q9Y6G3 142 aaKnown RBP8.5□□□□□ -1.05
CLK1-209ENST00000472679 C7orf72A4D263 438 aa8.49□□□□□ -1.05
CLK1-209ENST00000472679 WTIPA6NIX2 430 aaPredicted RBP8.49□□□□□ -1.05
CLK1-209ENST00000472679 PPP1R11O60927 126 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms