RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 TMEM67Q5HYA8 995 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 ERICH6BQ5W0A0 696 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 ANO1Q5XXA6 986 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 IQSEC1Q6DN90 963 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 ARMCX2Q7L311 632 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 CCDC144CPQ8IYA2 1237 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 ENAHQ8N8S7 591 aaPredicted RBP9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 CTCFLQ8NI51 663 aaPredicted RBP9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 DIS3LQ8TF46 1054 aaKnown RBP9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 TSEN34Q9BSV6 310 aaKnown RBP9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 MTA3Q9BTC8 594 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 UBA5Q9GZZ9 404 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 A1CFQ9NQ94 594 aaKnown RBP9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 CYP39A1Q9NYL5 469 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 RBM8AQ9Y5S9 174 aaKnown RBP9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 TACC3Q9Y6A5 838 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 ABCB11O95342 1321 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 WDR19Q8NEZ3 1342 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 MOXD2PA6NHM9 499 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 KLRF2D3W0D1 207 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 EIF5BO60841 1220 aaKnown RBP9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 CDC45O75419 566 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 C6orf222P0C671 652 aaPredicted RBP9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 ZNF865P0CJ78 1059 aaPredicted RBP9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 CALM1P0DP23 149 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 CALM2P0DP24 149 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 CALM3P0DP25 149 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 GNAQP50148 359 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 FGD1P98174 961 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 CNTN2Q02246 1040 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 TNFAIP2Q03169 654 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 PDE4DQ08499 809 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 BAATQ14032 418 aaPredicted RBP9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 KRT32Q14532 448 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 LRRC41Q15345 812 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 USH1GQ495M9 461 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 GNASQ5JWF2 1037 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 FBXO11Q86XK2 927 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 ADGRF4Q8IZF3 695 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 SAMD3Q8N6K7 520 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 FAM133AQ8N9E0 248 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 RGS22Q8NE09 1264 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 TRPV1Q8NER1 839 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 DNERQ8NFT8 737 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 TMEM87BQ96K49 555 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 GLT1D1Q96MS3 346 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 LZTS2Q9BRK4 669 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 ESYT1Q9BSJ8 1104 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 AMNQ9BXJ7 453 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 MAP3K20Q9NYL2 800 aaKnown RBP9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 ZNF536O15090 1300 aa9.74□□□□□ -0.85
TSPAN1-205ENST00000472170 DCDC2CA8MYV0 355 aa9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 SNAI1O95863 264 aaPredicted RBP9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 PGK1P00558 417 aa9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 IGHA2P01877 340 aa9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 HMGB1P09429 215 aaKnown RBP9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 COL6A1P12109 1028 aa9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 ADCYAP1R1P41586 468 aa9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 ATN1P54259 1190 aaPredicted RBP9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 CDC37Q16543 378 aaPredicted RBP9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 CCDC144BQ3MJ40 725 aa9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 MUM1L1Q5H9M0 696 aa9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 CHRDL2Q6WN34 429 aa9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 SLC39A5Q6ZMH5 540 aa9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 FERMT2Q96AC1 680 aa9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 SEZ6LQ9BYH1 1024 aa9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 VTA1Q9NP79 307 aa9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 GPHNQ9NQX3 736 aaPredicted RBP9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 STARD7Q9NQZ5 370 aa9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 COLQQ9Y215 455 aaPredicted RBP9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 ATP11BQ9Y2G3 1177 aa9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 Q9Y3F1 56 aa9.73□□□□□ -0.85
TSPAN1-205ENST00000472170 MYH6P13533 1939 aa9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 A0A1W2PPC1 479 aa9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 TLR3O15455 904 aaKnown RBP9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 CABYRO75952 493 aa9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 REC8O95072 547 aa9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 FXR1P51114 621 aaKnown RBP eCLIP9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 NSUN6Q8TEA1 469 aaKnown RBP9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 MAP3K14Q99558 947 aa9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 ANP32EQ9BTT0 268 aa9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 SEC63Q9UGP8 760 aaKnown RBP9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 ZMYND8Q9ULU4 1186 aaPredicted RBP9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 PHF24Q9UPV7 400 aa9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 PCDHA1Q9Y5I3 950 aa9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 SLC12A7Q9Y666 1083 aa9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 MROH7Q68CQ1 1323 aa9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 LAMA4Q16363 1823 aa9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 BRCA2P51587 3418 aa9.72□□□□□ -0.85
TSPAN1-205ENST00000472170 SLC27A2O14975 620 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 ZBTB5O15062 677 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 NKRFO15226 690 aaKnown RBP eCLIP9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 DYNC1LI2O43237 492 aaPredicted RBP9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 PRC1O43663 620 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 CFBP00751 764 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 TAL1P17542 331 aaPredicted RBP9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 SMARCA1P28370 1054 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 ALDH5A1P51649 535 aaPredicted RBP9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 ACLYP53396 1101 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 RTP1P59025 263 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms