RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ZNF213O14771 459 aa26.53■■□□□ 1.84
C9orf3-213ENST00000471978 CST5P28325 142 aaPredicted RBP26.53■■□□□ 1.84
C9orf3-213ENST00000471978 GJA9P57773 515 aa26.53■■□□□ 1.84
C9orf3-213ENST00000471978 IRX5P78411 483 aaPredicted RBP26.53■■□□□ 1.84
C9orf3-213ENST00000471978 NSMFQ6X4W1 530 aa26.53■■□□□ 1.84
C9orf3-213ENST00000471978 PCSK9Q8NBP7 692 aaKnown RBP26.53■■□□□ 1.84
C9orf3-213ENST00000471978 ESR2Q92731 530 aa26.53■■□□□ 1.84
C9orf3-213ENST00000471978 UPF3AQ9H1J1 476 aaKnown RBP26.53■■□□□ 1.84
C9orf3-213ENST00000471978 HIP1O00291 1037 aa26.52■■□□□ 1.84
C9orf3-213ENST00000471978 PDHBP11177 359 aa26.52■■□□□ 1.84
C9orf3-213ENST00000471978 NEDD4P46934 1319 aa26.52■■□□□ 1.84
C9orf3-213ENST00000471978 ASTN1O14525 1302 aa26.51■■□□□ 1.83
C9orf3-213ENST00000471978 ASGR1P07306 291 aa26.51■■□□□ 1.83
C9orf3-213ENST00000471978 TNFAIP2Q03169 654 aa26.51■■□□□ 1.83
C9orf3-213ENST00000471978 SHHQ15465 462 aa26.51■■□□□ 1.83
C9orf3-213ENST00000471978 GNASQ5JWF2 1037 aa26.51■■□□□ 1.83
C9orf3-213ENST00000471978 ANKRD33Q7Z3H0 272 aa26.51■■□□□ 1.83
C9orf3-213ENST00000471978 GLT1D1Q96MS3 346 aa26.51■■□□□ 1.83
C9orf3-213ENST00000471978 TOX2Q96NM4 488 aa26.51■■□□□ 1.83
C9orf3-213ENST00000471978 TMEM39AQ9NV64 488 aa26.51■■□□□ 1.83
C9orf3-213ENST00000471978 SUPT16HQ9Y5B9 1047 aaKnown RBP26.51■■□□□ 1.83
C9orf3-213ENST00000471978 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.5■■□□□ 1.83
C9orf3-213ENST00000471978 DCDC2CA8MYV0 355 aa26.5■■□□□ 1.83
C9orf3-213ENST00000471978 KIAA0355O15063 1070 aa26.5■■□□□ 1.83
C9orf3-213ENST00000471978 ITGB8P26012 769 aa26.5■■□□□ 1.83
C9orf3-213ENST00000471978 NOL8Q76FK4 1167 aaKnown RBP26.5■■□□□ 1.83
C9orf3-213ENST00000471978 VTI1AQ96AJ9 217 aa26.5■■□□□ 1.83
C9orf3-213ENST00000471978 ZKSCAN3Q9BRR0 538 aa26.5■■□□□ 1.83
C9orf3-213ENST00000471978 DDX49Q9Y6V7 483 aaKnown RBP26.5■■□□□ 1.83
C9orf3-213ENST00000471978 ELP1O95163 1332 aa26.49■■□□□ 1.83
C9orf3-213ENST00000471978 RAG1P15918 1043 aa26.49■■□□□ 1.83
C9orf3-213ENST00000471978 ZNF543Q08ER8 600 aa26.49■■□□□ 1.83
C9orf3-213ENST00000471978 FAAP100Q0VG06 881 aa26.49■■□□□ 1.83
C9orf3-213ENST00000471978 C9orf50Q5SZB4 431 aa26.49■■□□□ 1.83
C9orf3-213ENST00000471978 PURBQ96QR8 312 aaKnown RBP26.49■■□□□ 1.83
C9orf3-213ENST00000471978 SNHG28P0DPA3 235 aa26.48■■□□□ 1.83
C9orf3-213ENST00000471978 MTMR10Q9NXD2 777 aa26.48■■□□□ 1.83
C9orf3-213ENST00000471978 NFIBO00712 420 aa26.47■■□□□ 1.83
C9orf3-213ENST00000471978 CTAGE5O15320 804 aa26.47■■□□□ 1.83
C9orf3-213ENST00000471978 NT5C2P49902 561 aa26.47■■□□□ 1.83
C9orf3-213ENST00000471978 BAATQ14032 418 aaPredicted RBP26.47■■□□□ 1.83
C9orf3-213ENST00000471978 EEPD1Q7L9B9 569 aa26.47■■□□□ 1.83
C9orf3-213ENST00000471978 DGKHQ86XP1 1220 aa26.47■■□□□ 1.83
C9orf3-213ENST00000471978 DSCC1Q9BVC3 393 aa26.47■■□□□ 1.83
C9orf3-213ENST00000471978 GNEQ9Y223 722 aaKnown RBP26.47■■□□□ 1.83
C9orf3-213ENST00000471978 MROH7Q68CQ1 1323 aa26.46■■□□□ 1.83
C9orf3-213ENST00000471978 KDM4AO75164 1064 aa26.46■■□□□ 1.83
C9orf3-213ENST00000471978 NKX3-2P78367 333 aa26.46■■□□□ 1.83
C9orf3-213ENST00000471978 BEX3Q00994 111 aa26.46■■□□□ 1.83
C9orf3-213ENST00000471978 IQCA1Q86XH1 822 aa26.46■■□□□ 1.83
C9orf3-213ENST00000471978 FBXO16Q8IX29 292 aaPredicted RBP26.46■■□□□ 1.83
C9orf3-213ENST00000471978 PDGFCQ9NRA1 345 aa26.46■■□□□ 1.83
C9orf3-213ENST00000471978 ADD3Q9UEY8 706 aaKnown RBP26.46■■□□□ 1.83
C9orf3-213ENST00000471978 PNMA2Q9UL42 364 aa26.46■■□□□ 1.83
C9orf3-213ENST00000471978 LAMA4Q16363 1823 aa26.45■■□□□ 1.82
C9orf3-213ENST00000471978 A0A0U1RQG5 324 aaPredicted RBP26.45■■□□□ 1.82
C9orf3-213ENST00000471978 PTPDC1A2A3K4 754 aa26.45■■□□□ 1.82
C9orf3-213ENST00000471978 SMPD1P17405 629 aa26.45■■□□□ 1.82
C9orf3-213ENST00000471978 CDK7P50613 346 aa26.45■■□□□ 1.82
C9orf3-213ENST00000471978 IMMTQ16891 758 aaKnown RBP26.45■■□□□ 1.82
C9orf3-213ENST00000471978 CCDC178Q5BJE1 867 aa26.45■■□□□ 1.82
C9orf3-213ENST00000471978 IQSEC1Q6DN90 963 aa26.45■■□□□ 1.82
C9orf3-213ENST00000471978 TAPT1Q6NXT6 567 aa26.45■■□□□ 1.82
C9orf3-213ENST00000471978 TLK2Q86UE8 772 aa26.45■■□□□ 1.82
C9orf3-213ENST00000471978 MORC4Q8TE76 937 aa26.45■■□□□ 1.82
C9orf3-213ENST00000471978 AP5M1Q9H0R1 490 aa26.45■■□□□ 1.82
C9orf3-213ENST00000471978 B4E1Z4 1266 aa26.44■■□□□ 1.82
C9orf3-213ENST00000471978 ARVCFO00192 962 aa26.44■■□□□ 1.82
C9orf3-213ENST00000471978 GOLGA8HP0CJ92 632 aa26.44■■□□□ 1.82
C9orf3-213ENST00000471978 GPATCH4Q5T3I0 446 aaKnown RBP26.44■■□□□ 1.82
C9orf3-213ENST00000471978 FAM109BQ6ICB4 259 aaPredicted RBP26.44■■□□□ 1.82
C9orf3-213ENST00000471978 CLEC4DQ8WXI8 215 aa26.44■■□□□ 1.82
C9orf3-213ENST00000471978 VTA1Q9NP79 307 aa26.44■■□□□ 1.82
C9orf3-213ENST00000471978 CTNNA3Q9UI47 895 aa26.44■■□□□ 1.82
C9orf3-213ENST00000471978 LRRC37A2A6NM11 1700 aa26.44■■□□□ 1.82
C9orf3-213ENST00000471978 LCTP09848 1927 aa26.43■■□□□ 1.82
C9orf3-213ENST00000471978 A0A0C4DFX4 3053 aa26.43■■□□□ 1.82
C9orf3-213ENST00000471978 DYNC1LI2O43237 492 aaPredicted RBP26.43■■□□□ 1.82
C9orf3-213ENST00000471978 PTGS1P23219 599 aa26.43■■□□□ 1.82
C9orf3-213ENST00000471978 PDE4AP27815 886 aa26.43■■□□□ 1.82
C9orf3-213ENST00000471978 ALDH5A1P51649 535 aaPredicted RBP26.43■■□□□ 1.82
C9orf3-213ENST00000471978 FPGSQ05932 587 aa26.43■■□□□ 1.82
C9orf3-213ENST00000471978 FSCN1Q16658 493 aaKnown RBP26.43■■□□□ 1.82
C9orf3-213ENST00000471978 PNMA1Q8ND90 353 aa26.43■■□□□ 1.82
C9orf3-213ENST00000471978 KAT14Q9H8E8 782 aa26.43■■□□□ 1.82
C9orf3-213ENST00000471978 STXBP5LQ9Y2K9 1186 aa26.43■■□□□ 1.82
C9orf3-213ENST00000471978 WDR19Q8NEZ3 1342 aa26.42■■□□□ 1.82
C9orf3-213ENST00000471978 TIMP1P01033 207 aa26.42■■□□□ 1.82
C9orf3-213ENST00000471978 CALML3P27482 149 aa26.42■■□□□ 1.82
C9orf3-213ENST00000471978 EPHB4P54760 987 aa26.42■■□□□ 1.82
C9orf3-213ENST00000471978 SLC30A10Q6XR72 485 aa26.42■■□□□ 1.82
C9orf3-213ENST00000471978 RNF207Q6ZRF8 634 aa26.42■■□□□ 1.82
C9orf3-213ENST00000471978 KIAA1211Q6ZU35 1233 aa26.42■■□□□ 1.82
C9orf3-213ENST00000471978 ZSCAN10Q96SZ4 725 aaPredicted RBP26.42■■□□□ 1.82
C9orf3-213ENST00000471978 TBX21Q9UL17 535 aa26.42■■□□□ 1.82
C9orf3-213ENST00000471978 LOC102724159A0A0B4J2E5 919 aa26.41■■□□□ 1.82
C9orf3-213ENST00000471978 PWP2Q15269 919 aaKnown RBP26.41■■□□□ 1.82
C9orf3-213ENST00000471978 TMEM63BQ5T3F8 832 aa26.41■■□□□ 1.82
C9orf3-213ENST00000471978 CXCL17Q6UXB2 119 aa26.41■■□□□ 1.82
C9orf3-213ENST00000471978 SLC17A8Q8NDX2 589 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms