RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 MPZL3Q6UWV2 235 aa7.96□□□□□ -1.14
HDAC9-221ENST00000471887 NLRX1Q86UT6 975 aa7.96□□□□□ -1.14
HDAC9-221ENST00000471887 UBXN4Q92575 508 aa7.96□□□□□ -1.14
HDAC9-221ENST00000471887 COPS5Q92905 334 aa7.96□□□□□ -1.14
HDAC9-221ENST00000471887 SGSM3Q96HU1 749 aa7.96□□□□□ -1.14
HDAC9-221ENST00000471887 FAM53CQ9NYF3 392 aa7.96□□□□□ -1.14
HDAC9-221ENST00000471887 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.96□□□□□ -1.14
HDAC9-221ENST00000471887 TRBV23OR9-2A0A075B6M9 112 aa7.95□□□□□ -1.14
HDAC9-221ENST00000471887 TBX1O43435 398 aa7.95□□□□□ -1.14
HDAC9-221ENST00000471887 HOXC12P31275 282 aa7.95□□□□□ -1.14
HDAC9-221ENST00000471887 RASGRF1Q13972 1273 aa7.95□□□□□ -1.14
HDAC9-221ENST00000471887 ZNF669Q96BR6 464 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-221ENST00000471887 JMJD8Q96S16 334 aa7.95□□□□□ -1.14
HDAC9-221ENST00000471887 SLC6A17Q9H1V8 727 aa7.95□□□□□ -1.14
HDAC9-221ENST00000471887 YBX2Q9Y2T7 364 aaKnown RBP7.95□□□□□ -1.14
HDAC9-221ENST00000471887 RNF114Q9Y508 228 aa7.95□□□□□ -1.14
HDAC9-221ENST00000471887 A0A1W2PQ27 194 aa7.94□□□□□ -1.14
HDAC9-221ENST00000471887 A0A1W2PQ64 194 aa7.94□□□□□ -1.14
HDAC9-221ENST00000471887 A0A1W2PQC6 194 aa7.94□□□□□ -1.14
HDAC9-221ENST00000471887 A0A1W2PQD8 194 aa7.94□□□□□ -1.14
HDAC9-221ENST00000471887 A0A1W2PQU0 124 aa7.94□□□□□ -1.14
HDAC9-221ENST00000471887 PAMP19021 973 aa7.94□□□□□ -1.14
HDAC9-221ENST00000471887 PPP2R2AP63151 447 aa7.94□□□□□ -1.14
HDAC9-221ENST00000471887 LRRC47Q8N1G4 583 aaKnown RBP7.94□□□□□ -1.14
HDAC9-221ENST00000471887 SHISA4Q96DD7 197 aa7.94□□□□□ -1.14
HDAC9-221ENST00000471887 LIN37Q96GY3 246 aaPredicted RBP7.94□□□□□ -1.14
HDAC9-221ENST00000471887 CCDC140Q96MF4 163 aa7.94□□□□□ -1.14
HDAC9-221ENST00000471887 PLCD4Q9BRC7 762 aa7.94□□□□□ -1.14
HDAC9-221ENST00000471887 CRTAC1Q9NQ79 661 aa7.94□□□□□ -1.14
HDAC9-221ENST00000471887 NPHP3-ACAD11A0A0J9YXS1 232 aa7.93□□□□□ -1.14
HDAC9-221ENST00000471887 KRTAP9-6A0A140TA67 174 aa7.93□□□□□ -1.14
HDAC9-221ENST00000471887 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.93□□□□□ -1.14
HDAC9-221ENST00000471887 CPP00450 1065 aa7.93□□□□□ -1.14
HDAC9-221ENST00000471887 SNRPB2P08579 225 aaKnown RBP7.93□□□□□ -1.14
HDAC9-221ENST00000471887 L1CAMP32004 1257 aa7.93□□□□□ -1.14
HDAC9-221ENST00000471887 LAPTM5Q13571 262 aa7.93□□□□□ -1.14
HDAC9-221ENST00000471887 HSP90AA2PQ14568 343 aaPredicted RBP7.93□□□□□ -1.14
HDAC9-221ENST00000471887 MTERF2Q49AM1 385 aa7.93□□□□□ -1.14
HDAC9-221ENST00000471887 LRP10Q7Z4F1 713 aa7.93□□□□□ -1.14
HDAC9-221ENST00000471887 SIRT2Q8IXJ6 389 aa7.93□□□□□ -1.14
HDAC9-221ENST00000471887 NUP43Q8NFH3 380 aa7.93□□□□□ -1.14
HDAC9-221ENST00000471887 MKL1Q969V6 931 aa7.93□□□□□ -1.14
HDAC9-221ENST00000471887 INTS4Q96HW7 963 aaKnown RBP7.93□□□□□ -1.14
HDAC9-221ENST00000471887 DEPDC7Q96QD5 511 aa7.93□□□□□ -1.14
HDAC9-221ENST00000471887 GPRC5CQ9NQ84 441 aa7.93□□□□□ -1.14
HDAC9-221ENST00000471887 IMPACTQ9P2X3 320 aa7.93□□□□□ -1.14
HDAC9-221ENST00000471887 LRRC10BA6NIK2 292 aa7.92□□□□□ -1.14
HDAC9-221ENST00000471887 EFEMP2O95967 443 aa7.92□□□□□ -1.14
HDAC9-221ENST00000471887 THBDP07204 575 aa7.92□□□□□ -1.14
HDAC9-221ENST00000471887 PNLIPP16233 465 aa7.92□□□□□ -1.14
HDAC9-221ENST00000471887 PRKCAP17252 672 aa7.92□□□□□ -1.14
HDAC9-221ENST00000471887 ARL4AP40617 200 aa7.92□□□□□ -1.14
HDAC9-221ENST00000471887 GALK1P51570 392 aa7.92□□□□□ -1.14
HDAC9-221ENST00000471887 IFRD2Q12894 506 aaPredicted RBP7.92□□□□□ -1.14
HDAC9-221ENST00000471887 RASA3Q14644 834 aa7.92□□□□□ -1.14
HDAC9-221ENST00000471887 SRPK1Q96SB4 655 aaKnown RBP7.92□□□□□ -1.14
HDAC9-221ENST00000471887 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.92□□□□□ -1.14
HDAC9-221ENST00000471887 CLEC1BQ9P126 229 aa7.92□□□□□ -1.14
HDAC9-221ENST00000471887 ACSL6Q9UKU0 697 aa7.92□□□□□ -1.14
HDAC9-221ENST00000471887 SCG5P05408 212 aa7.91□□□□□ -1.14
HDAC9-221ENST00000471887 PLS3P13797 630 aa7.91□□□□□ -1.14
HDAC9-221ENST00000471887 ECI1P42126 302 aa7.91□□□□□ -1.14
HDAC9-221ENST00000471887 KCNJ6P48051 423 aa7.91□□□□□ -1.14
HDAC9-221ENST00000471887 GFRA1P56159 465 aa7.91□□□□□ -1.14
HDAC9-221ENST00000471887 CORO7P57737 925 aa7.91□□□□□ -1.14
HDAC9-221ENST00000471887 RBM10P98175 930 aaKnown RBP7.91□□□□□ -1.14
HDAC9-221ENST00000471887 CYP4F8P98187 520 aa7.91□□□□□ -1.14
HDAC9-221ENST00000471887 SPATC1Q76KD6 591 aa7.91□□□□□ -1.14
HDAC9-221ENST00000471887 CPNE8Q86YQ8 564 aa7.91□□□□□ -1.14
HDAC9-221ENST00000471887 IRF2BP1Q8IU81 584 aa7.91□□□□□ -1.14
HDAC9-221ENST00000471887 AARSD1Q9BTE6 412 aaKnown RBP7.91□□□□□ -1.14
HDAC9-221ENST00000471887 OSBPL2Q9H1P3 480 aa7.91□□□□□ -1.14
HDAC9-221ENST00000471887 SNTG2Q9NY99 539 aa7.91□□□□□ -1.14
HDAC9-221ENST00000471887 CAPNS1P04632 268 aa7.9□□□□□ -1.14
HDAC9-221ENST00000471887 GRIA2P42262 883 aa7.9□□□□□ -1.14
HDAC9-221ENST00000471887 CYP4F3Q08477 520 aa7.9□□□□□ -1.14
HDAC9-221ENST00000471887 KIR3DS1Q14943 382 aa7.9□□□□□ -1.14
HDAC9-221ENST00000471887 SF1Q15637 639 aaKnown RBP7.9□□□□□ -1.14
HDAC9-221ENST00000471887 MLANAQ16655 118 aa7.9□□□□□ -1.14
HDAC9-221ENST00000471887 NLGN2Q8NFZ4 835 aa7.9□□□□□ -1.14
HDAC9-221ENST00000471887 FRS2Q8WU20 508 aa7.9□□□□□ -1.14
HDAC9-221ENST00000471887 FMNL2Q96PY5 1086 aa7.9□□□□□ -1.14
HDAC9-221ENST00000471887 MMP19Q99542 508 aa7.9□□□□□ -1.14
HDAC9-221ENST00000471887 SPATA9Q9BWV2 254 aa7.9□□□□□ -1.14
HDAC9-221ENST00000471887 PFDN2Q9UHV9 154 aa7.9□□□□□ -1.14
HDAC9-221ENST00000471887 PDE6BP35913 854 aa7.89□□□□□ -1.15
HDAC9-221ENST00000471887 RANGAP1P46060 587 aaPredicted RBP7.89□□□□□ -1.15
HDAC9-221ENST00000471887 MVKQ03426 396 aa7.89□□□□□ -1.15
HDAC9-221ENST00000471887 SSRP1Q08945 709 aaKnown RBP7.89□□□□□ -1.15
HDAC9-221ENST00000471887 ADGRF1Q5T601 910 aa7.89□□□□□ -1.15
HDAC9-221ENST00000471887 E4F1Q66K89 784 aaPredicted RBP7.89□□□□□ -1.15
HDAC9-221ENST00000471887 IQCEQ6IPM2 695 aa7.89□□□□□ -1.15
HDAC9-221ENST00000471887 PRR23BQ6ZRT6 265 aa7.89□□□□□ -1.15
HDAC9-221ENST00000471887 NPLOC4Q8TAT6 608 aa7.89□□□□□ -1.15
HDAC9-221ENST00000471887 KCTD13Q8WZ19 329 aa7.89□□□□□ -1.15
HDAC9-221ENST00000471887 DIRC2Q96SL1 478 aa7.89□□□□□ -1.15
HDAC9-221ENST00000471887 IER2Q9BTL4 223 aa7.89□□□□□ -1.15
HDAC9-221ENST00000471887 TRAV20A0A0B4J274 112 aa7.88□□□□□ -1.15
HDAC9-221ENST00000471887 A0A1W2PQJ5 194 aa7.88□□□□□ -1.15
HDAC9-221ENST00000471887 FAM221BA6H8Z2 402 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms