RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 TROVE2P10155 538 aaKnown RBP eCLIP14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 GYG1P46976 350 aa14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CDV3Q9UKY7 258 aaKnown RBP14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ATP1A2P50993 1020 aa14.46□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 HEXIM1O94992 359 aaKnown RBP14.46□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 RCN2Q14257 317 aa14.46□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 LPIN2Q92539 896 aa14.45□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 DDX25Q9UHL0 483 aaKnown RBP14.45□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 DCAF15Q66K64 600 aa14.45□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 POLR2MP0CAP2 368 aa14.45□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 PABPC4Q13310 644 aaKnown RBP eCLIP14.45□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 RINT1Q6NUQ1 792 aa14.45□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 GPKOWQ92917 476 aaPredicted RBP eCLIP14.45□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 IBTKQ9P2D0 1353 aaPredicted RBP14.45□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 NLRP7Q8WX94 980 aa14.45□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 RAB17Q9H0T7 212 aa14.45□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 HIF1AQ16665 826 aa14.45□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 GJA10Q969M2 543 aa14.45□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 PHACTR3Q96KR7 559 aa14.45□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 LRGUKQ96M69 825 aa14.45□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 METTL22Q9BUU2 404 aaPredicted RBP14.45□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 JAK2O60674 1132 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 DYNLT1P63172 113 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 PDZD4Q76G19 769 aaPredicted RBP14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 DNAJC10Q8IXB1 793 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 LZICQ8WZA0 190 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ZSCAN20P17040 1043 aaPredicted RBP14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 EEF1GP26641 437 aaKnown RBP14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 CTNNA1P35221 906 aaKnown RBP14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 C16orf72Q14CZ0 275 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 PLEKHM2Q8IWE5 1019 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ZNF654Q8IZM8 581 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ELF2Q15723 593 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 APOEP02649 317 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ELF1P32519 619 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 EPHB1P54762 984 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ORC6Q9Y5N6 252 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 SCAF11Q99590 1463 aaKnown RBP14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 A0A1B0GUA9 196 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 PTPREP23469 700 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 YWHAGP61981 247 aaKnown RBP eCLIP14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 PAK2Q13177 524 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 P3H4Q92791 437 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 EDC3Q96F86 508 aaKnown RBP14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 SLC38A10Q9HBR0 1119 aa14.44□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 FANCAO15360 1455 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ZBBXA8MT70 800 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 CUTAO60888 179 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 POLR2BP30876 1174 aaKnown RBP14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 PDE1BQ01064 536 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 BFSP1Q12934 665 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 FAM182BQ5T319 152 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 SNX25Q9H3E2 840 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 GPC4O75487 556 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 FBXO11Q86XK2 927 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 RPGRIP1Q96KN7 1286 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 C14orf93Q9H972 538 aaKnown RBP14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 SLC39A2Q9NP94 309 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ANKRD36BQ8N2N9 1353 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 CFAP61Q8NHU2 1237 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 LGR6Q9HBX8 967 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 HACD3Q9P035 362 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 SUCLA2Q9P2R7 463 aaPredicted RBP14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 GCNAQ96QF7 691 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 IL16Q14005 1332 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 HNRNPDLO14979 420 aaKnown RBP14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 PLB1Q6P1J6 1458 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 RAD50Q92878 1312 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 TFAMQ00059 246 aaKnown RBP14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 SNX1Q13596 522 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 TTC19Q6DKK2 380 aaPredicted RBP14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 PLA2G4DQ86XP0 818 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 TTC25Q96NG3 672 aa14.43□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 UBXN8O00124 270 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 TRIM37O94972 964 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 KCTD1Q719H9 257 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 METTL23Q86XA0 190 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ORAI2Q96SN7 254 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 NXF1Q9UBU9 619 aaKnown RBP14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 LRRN2O75325 713 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 PI4K2BQ8TCG2 481 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 PDCD6IPQ8WUM4 868 aaKnown RBP14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 FTOQ9C0B1 505 aaKnown RBP eCLIP14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 KRT82Q9NSB4 513 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ARHGAP25P42331 645 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 RASSF2P50749 326 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 KCTD2Q14681 263 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 RFX6Q8HWS3 928 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 RNF40O75150 1001 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ACTN1P12814 892 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 HOXC9P31274 260 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 BCAMP50895 628 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 RPS8P62241 208 aaKnown RBP14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 ARHGEF6Q15052 776 aa14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 TSR3Q9UJK0 312 aaKnown RBP14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 MRPL11Q9Y3B7 192 aaKnown RBP14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 DENND4BO75064 1496 aaPredicted RBP14.42□□□□□ -0.1
NPHP3-ACAD11-201ENST00000471702 TMEM232C9JQI7 657 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms