RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 NUP43Q8NFH3 380 aa8.22□□□□□ -1.09
PRPF40A-206ENST00000471167 MRGPRX3Q96LB0 322 aa8.22□□□□□ -1.09
PRPF40A-206ENST00000471167 PPP1R16BQ96T49 567 aa8.22□□□□□ -1.09
PRPF40A-206ENST00000471167 GMLQ99445 158 aa8.22□□□□□ -1.09
PRPF40A-206ENST00000471167 PRKAG3Q9UGI9 489 aa8.22□□□□□ -1.09
PRPF40A-206ENST00000471167 PLA2G2DQ9UNK4 145 aa8.22□□□□□ -1.09
PRPF40A-206ENST00000471167 EMC9Q9Y3B6 208 aa8.22□□□□□ -1.09
PRPF40A-206ENST00000471167 TAF6LQ9Y6J9 622 aa8.22□□□□□ -1.09
PRPF40A-206ENST00000471167 KRTAP4-8A0A0G2JLE6 195 aa8.21□□□□□ -1.1
PRPF40A-206ENST00000471167 TEX51A0A1B0GUA7 166 aa8.21□□□□□ -1.1
PRPF40A-206ENST00000471167 NPIPB6E9PJ23 425 aa8.21□□□□□ -1.1
PRPF40A-206ENST00000471167 TBX1O43435 398 aa8.21□□□□□ -1.1
PRPF40A-206ENST00000471167 PPM1BO75688 479 aa8.21□□□□□ -1.1
PRPF40A-206ENST00000471167 PKN1Q16512 942 aa8.21□□□□□ -1.1
PRPF40A-206ENST00000471167 GBP3Q9H0R5 595 aa8.21□□□□□ -1.1
PRPF40A-206ENST00000471167 CNTD2Q9H8S5 307 aa8.21□□□□□ -1.1
PRPF40A-206ENST00000471167 HCFC2Q9Y5Z7 792 aa8.21□□□□□ -1.1
PRPF40A-206ENST00000471167 CAPNS1P04632 268 aa8.2□□□□□ -1.1
PRPF40A-206ENST00000471167 TMEM253P0C7T8 217 aa8.2□□□□□ -1.1
PRPF40A-206ENST00000471167 CYP4F8P98187 520 aa8.2□□□□□ -1.1
PRPF40A-206ENST00000471167 CBX2Q14781 532 aaPredicted RBP8.2□□□□□ -1.1
PRPF40A-206ENST00000471167 HLA-DQA1Q5Y7H0 255 aa8.2□□□□□ -1.1
PRPF40A-206ENST00000471167 MBLAC2Q68D91 279 aa8.2□□□□□ -1.1
PRPF40A-206ENST00000471167 SLC43A3Q8NBI5 491 aa8.2□□□□□ -1.1
PRPF40A-206ENST00000471167 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.2□□□□□ -1.11e-8■□□□□ 9.2
PRPF40A-206ENST00000471167 EPB41L4AQ9HCS5 686 aaPredicted RBP8.2□□□□□ -1.1
PRPF40A-206ENST00000471167 HRKO00198 91 aa8.19□□□□□ -1.1
PRPF40A-206ENST00000471167 NFIBO00712 420 aa8.19□□□□□ -1.1
PRPF40A-206ENST00000471167 EPHB3P54753 998 aa8.19□□□□□ -1.1
PRPF40A-206ENST00000471167 SRSF3P84103 164 aaKnown RBP8.19□□□□□ -1.1
PRPF40A-206ENST00000471167 GRB10Q13322 594 aa8.19□□□□□ -1.1
PRPF40A-206ENST00000471167 KCNA10Q16322 511 aa8.19□□□□□ -1.1
PRPF40A-206ENST00000471167 LCE4AQ5TA78 99 aa8.19□□□□□ -1.1
PRPF40A-206ENST00000471167 NLGN2Q8NFZ4 835 aa8.19□□□□□ -1.1
PRPF40A-206ENST00000471167 COPS5Q92905 334 aa8.19□□□□□ -1.1
PRPF40A-206ENST00000471167 ACTR10Q9NZ32 417 aa8.19□□□□□ -1.1
PRPF40A-206ENST00000471167 AKT3Q9Y243 479 aa8.19□□□□□ -1.1
PRPF40A-206ENST00000471167 C2orf71A6NGG8 1288 aa8.18□□□□□ -1.1
PRPF40A-206ENST00000471167 SSBP05455 408 aaKnown RBP eCLIP8.18□□□□□ -1.1
PRPF40A-206ENST00000471167 ARID5AQ03989 594 aa8.18□□□□□ -1.1
PRPF40A-206ENST00000471167 LAPTM5Q13571 262 aa8.18□□□□□ -1.1
PRPF40A-206ENST00000471167 SSPNQ14714 243 aa8.18□□□□□ -1.1
PRPF40A-206ENST00000471167 NCAPHQ15003 741 aa8.18□□□□□ -1.1
PRPF40A-206ENST00000471167 CYP2R1Q6VVX0 501 aa8.18□□□□□ -1.1
PRPF40A-206ENST00000471167 RPTNQ6XPR3 784 aa8.18□□□□□ -1.1
PRPF40A-206ENST00000471167 VPS37DQ86XT2 251 aa8.18□□□□□ -1.1
PRPF40A-206ENST00000471167 FAM178BQ8IXR5 827 aa8.18□□□□□ -1.1
PRPF40A-206ENST00000471167 CELF2-AS1Q8N7Q2 184 aa8.18□□□□□ -1.1
PRPF40A-206ENST00000471167 NAT16Q8N8M0 369 aa8.18□□□□□ -1.1
PRPF40A-206ENST00000471167 GPRC5CQ9NQ84 441 aa8.18□□□□□ -1.1
PRPF40A-206ENST00000471167 SEMA7AO75326 666 aa8.17□□□□□ -1.1
PRPF40A-206ENST00000471167 KCNH1O95259 989 aa8.17□□□□□ -1.1
PRPF40A-206ENST00000471167 DNAJA1P31689 397 aaKnown RBP8.17□□□□□ -1.1
PRPF40A-206ENST00000471167 CDR1P51861 262 aa8.17□□□□□ -1.1
PRPF40A-206ENST00000471167 EEF1DP3Q658K8 133 aa8.17□□□□□ -1.1
PRPF40A-206ENST00000471167 ANKLE2Q86XL3 938 aa8.17□□□□□ -1.1
PRPF40A-206ENST00000471167 CPNE8Q86YQ8 564 aa8.17□□□□□ -1.1
PRPF40A-206ENST00000471167 TRIM59Q8IWR1 403 aa8.17□□□□□ -1.1
PRPF40A-206ENST00000471167 LRRC56Q8IYG6 542 aaPredicted RBP8.17□□□□□ -1.1
PRPF40A-206ENST00000471167 BVESQ8NE79 360 aa8.17□□□□□ -1.1
PRPF40A-206ENST00000471167 PANK1Q8TE04 598 aa8.17□□□□□ -1.1
PRPF40A-206ENST00000471167 APBA2Q99767 749 aa8.17□□□□□ -1.1
PRPF40A-206ENST00000471167 SUGT1Q9Y2Z0 365 aa8.17□□□□□ -1.1
PRPF40A-206ENST00000471167 BACE2Q9Y5Z0 518 aa8.17□□□□□ -1.1
PRPF40A-206ENST00000471167 ADAMTS20P59510 1910 aa8.17□□□□□ -1.1
PRPF40A-206ENST00000471167 BTBD11A6QL63 1104 aa8.16□□□□□ -1.1
PRPF40A-206ENST00000471167 NUDT19A8MXV4 375 aa8.16□□□□□ -1.1
PRPF40A-206ENST00000471167 KLF4O43474 513 aa8.16□□□□□ -1.1
PRPF40A-206ENST00000471167 DBHP09172 617 aa8.16□□□□□ -1.1
PRPF40A-206ENST00000471167 TACR1P25103 407 aa8.16□□□□□ -1.1
PRPF40A-206ENST00000471167 LINC00310P59036 64 aa8.16□□□□□ -1.1
PRPF40A-206ENST00000471167 AMPD2Q01433 879 aa8.16□□□□□ -1.1
PRPF40A-206ENST00000471167 LARP1BQ659C4 914 aaKnown RBP8.16□□□□□ -1.1
PRPF40A-206ENST00000471167 HNRNPLLQ8WVV9 542 aaKnown RBP8.16□□□□□ -1.1
PRPF40A-206ENST00000471167 MTA3Q9BTC8 594 aa8.16□□□□□ -1.1
PRPF40A-206ENST00000471167 GJB6O95452 261 aa8.15□□□□□ -1.1
PRPF40A-206ENST00000471167 MPOP05164 745 aa8.15□□□□□ -1.1
PRPF40A-206ENST00000471167 ITGAVP06756 1048 aa8.15□□□□□ -1.1
PRPF40A-206ENST00000471167 FBLN1P23142 703 aa8.15□□□□□ -1.1
PRPF40A-206ENST00000471167 L1CAMP32004 1257 aa8.15□□□□□ -1.1
PRPF40A-206ENST00000471167 ZNF143P52747 638 aaPredicted RBP8.15□□□□□ -1.1
PRPF40A-206ENST00000471167 RAB3GAP1Q15042 981 aa8.15□□□□□ -1.1
PRPF40A-206ENST00000471167 SF1Q15637 639 aaKnown RBP8.15□□□□□ -1.1
PRPF40A-206ENST00000471167 TNNI3KQ59H18 835 aa8.15□□□□□ -1.1
PRPF40A-206ENST00000471167 GTF2IRD2BQ6EKJ0 949 aa8.15□□□□□ -1.1
PRPF40A-206ENST00000471167 GTF2IRD2Q86UP8 949 aa8.15□□□□□ -1.1
PRPF40A-206ENST00000471167 IGDCC3Q8IVU1 814 aa8.15□□□□□ -1.1
PRPF40A-206ENST00000471167 TMEFF1Q8IYR6 380 aa8.15□□□□□ -1.1
PRPF40A-206ENST00000471167 DPF3Q92784 378 aa8.15□□□□□ -1.1
PRPF40A-206ENST00000471167 PDLIM7Q9NR12 457 aa8.15□□□□□ -1.1
PRPF40A-206ENST00000471167 IRS2Q9Y4H2 1338 aa8.14□□□□□ -1.11
PRPF40A-206ENST00000471167 TCAF2A6NFQ2 919 aa8.14□□□□□ -1.11
PRPF40A-206ENST00000471167 E9PSI1 815 aa8.14□□□□□ -1.11
PRPF40A-206ENST00000471167 IRS4O14654 1257 aaPredicted RBP8.14□□□□□ -1.11
PRPF40A-206ENST00000471167 SUSD5O60279 629 aa8.14□□□□□ -1.11
PRPF40A-206ENST00000471167 TBC1D8O95759 1140 aa8.14□□□□□ -1.11
PRPF40A-206ENST00000471167 SCRN1Q12765 414 aa8.14□□□□□ -1.11
PRPF40A-206ENST00000471167 INF2Q27J81 1249 aa8.14□□□□□ -1.11
PRPF40A-206ENST00000471167 PLEKHN1Q494U1 663 aaPredicted RBP8.14□□□□□ -1.11
PRPF40A-206ENST00000471167 JAMLQ86YT9 394 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms