RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ASB14A6NK59 587 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 TRIM6-TRIM34B2RNG4 842 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 TMEM232C9JQI7 657 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 CABYRO75952 493 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 APPP05067 770 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 TSPY3P0CV98 308 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 TSPY8P0CW00 308 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 SDSP20132 328 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 CNTN2Q02246 1040 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 PDE4BQ07343 736 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 TKFCQ3LXA3 575 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 TJAP1Q5JTD0 557 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 PPP4R3BQ5MIZ7 849 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 CCDC129Q6ZRS4 1044 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 FAM160B2Q86V87 743 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 EVI5LQ96CN4 794 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 SEZ6LQ9BYH1 1024 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 NACAP1Q9BZK3 213 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 PPP1R12CQ9BZL4 782 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 A1CFQ9NQ94 594 aaKnown RBP10.72□□□□□ -0.69
SF3A1-206ENST00000471037 PRDM6Q9NQX0 595 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 HOMER2Q9NSB8 354 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 RNF146Q9NTX7 359 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 GNEQ9Y223 722 aaKnown RBP10.72□□□□□ -0.69
SF3A1-206ENST00000471037 ASTN1O14525 1302 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 MCM3APO60318 1980 aa10.72□□□□□ -0.69
SF3A1-206ENST00000471037 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.71□□□□□ -0.69
SF3A1-206ENST00000471037 SOWAHBA6NEL2 793 aa10.71□□□□□ -0.69
SF3A1-206ENST00000471037 SLC3A2P08195 630 aaKnown RBP10.71□□□□□ -0.69
SF3A1-206ENST00000471037 PBX2P40425 430 aa10.71□□□□□ -0.69
SF3A1-206ENST00000471037 TNFAIP2Q03169 654 aa10.71□□□□□ -0.69
SF3A1-206ENST00000471037 PPARAQ07869 468 aa10.71□□□□□ -0.69
SF3A1-206ENST00000471037 ZNF365Q70YC5 407 aa10.71□□□□□ -0.69
SF3A1-206ENST00000471037 TICAM2Q86XR7 235 aa10.71□□□□□ -0.69
SF3A1-206ENST00000471037 CHURC1Q8WUH1 139 aa10.71□□□□□ -0.69
SF3A1-206ENST00000471037 STAG1Q8WVM7 1258 aa10.71□□□□□ -0.69
SF3A1-206ENST00000471037 HERVK_113Q902F9 699 aa10.71□□□□□ -0.69
SF3A1-206ENST00000471037 VTI1AQ96AJ9 217 aa10.71□□□□□ -0.69
SF3A1-206ENST00000471037 GAS2L1Q99501 681 aaPredicted RBP10.71□□□□□ -0.69
SF3A1-206ENST00000471037 NAPBQ9H115 298 aa10.71□□□□□ -0.69
SF3A1-206ENST00000471037 IL23AQ9NPF7 189 aa10.71□□□□□ -0.69
SF3A1-206ENST00000471037 TTC28Q96AY4 2481 aa10.7□□□□□ -0.7
SF3A1-206ENST00000471037 GRXCR1A8MXD5 290 aa10.7□□□□□ -0.7
SF3A1-206ENST00000471037 CDC45O75419 566 aa10.7□□□□□ -0.7
SF3A1-206ENST00000471037 ACRP10323 421 aa10.7□□□□□ -0.7
SF3A1-206ENST00000471037 SLC1A4P43007 532 aa10.7□□□□□ -0.7
SF3A1-206ENST00000471037 BEX3Q00994 111 aa10.7□□□□□ -0.7
SF3A1-206ENST00000471037 TFAP4Q01664 338 aa10.7□□□□□ -0.7
SF3A1-206ENST00000471037 RAB30Q15771 203 aa10.7□□□□□ -0.7
SF3A1-206ENST00000471037 FSCN1Q16658 493 aaKnown RBP10.7□□□□□ -0.7
SF3A1-206ENST00000471037 ZMYM1Q5SVZ6 1142 aa10.7□□□□□ -0.7
SF3A1-206ENST00000471037 AKNAD1Q5T1N1 836 aa10.7□□□□□ -0.7
SF3A1-206ENST00000471037 CXCL17Q6UXB2 119 aa10.7□□□□□ -0.7
SF3A1-206ENST00000471037 TLK2Q86UE8 772 aa10.7□□□□□ -0.7
SF3A1-206ENST00000471037 RILPL2Q969X0 211 aa10.7□□□□□ -0.7
SF3A1-206ENST00000471037 AGBL1Q96MI9 1066 aa10.7□□□□□ -0.7
SF3A1-206ENST00000471037 TRERF1Q96PN7 1200 aa10.7□□□□□ -0.7
SF3A1-206ENST00000471037 SEC62Q99442 399 aaKnown RBP10.7□□□□□ -0.7
SF3A1-206ENST00000471037 MTIF3Q9H2K0 278 aaKnown RBP10.7□□□□□ -0.7
SF3A1-206ENST00000471037 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.7□□□□□ -0.7
SF3A1-206ENST00000471037 Q9Y3F1 56 aa10.7□□□□□ -0.7
SF3A1-206ENST00000471037 MUC3AQ02505 3323 aa10.69□□□□□ -0.7
SF3A1-206ENST00000471037 GRIN2DO15399 1336 aa10.69□□□□□ -0.7
SF3A1-206ENST00000471037 HIP1O00291 1037 aa10.69□□□□□ -0.7
SF3A1-206ENST00000471037 EIF5BO60841 1220 aaKnown RBP10.69□□□□□ -0.7
SF3A1-206ENST00000471037 SMPD1P17405 629 aa10.69□□□□□ -0.7
SF3A1-206ENST00000471037 MCCP23508 829 aa10.69□□□□□ -0.7
SF3A1-206ENST00000471037 CYP2C18P33260 490 aa10.69□□□□□ -0.7
SF3A1-206ENST00000471037 NOVP48745 357 aa10.69□□□□□ -0.7
SF3A1-206ENST00000471037 ITGA7Q13683 1181 aa10.69□□□□□ -0.7
SF3A1-206ENST00000471037 RCSD1Q6JBY9 416 aa10.69□□□□□ -0.7
SF3A1-206ENST00000471037 TAPT1Q6NXT6 567 aa10.69□□□□□ -0.7
SF3A1-206ENST00000471037 CASC1Q6TDU7 716 aa10.69□□□□□ -0.7
SF3A1-206ENST00000471037 MORC4Q8TE76 937 aa10.69□□□□□ -0.7
SF3A1-206ENST00000471037 ATXN2LQ8WWM7 1075 aaKnown RBP10.69□□□□□ -0.7
SF3A1-206ENST00000471037 NOC4LQ9BVI4 516 aaKnown RBP10.69□□□□□ -0.7
SF3A1-206ENST00000471037 HIPK3Q9H422 1215 aa10.69□□□□□ -0.7
SF3A1-206ENST00000471037 CYP39A1Q9NYL5 469 aa10.69□□□□□ -0.7
SF3A1-206ENST00000471037 CXXC1Q9P0U4 656 aaPredicted RBP10.69□□□□□ -0.7
SF3A1-206ENST00000471037 STX8Q9UNK0 236 aa10.69□□□□□ -0.7
SF3A1-206ENST00000471037 UMODL1Q5DID0 1318 aa10.68□□□□□ -0.7
SF3A1-206ENST00000471037 LOC102724159A0A0B4J2E5 919 aa10.68□□□□□ -0.7
SF3A1-206ENST00000471037 FOXP2O15409 715 aa10.68□□□□□ -0.7
SF3A1-206ENST00000471037 ZEB2O60315 1214 aa10.68□□□□□ -0.7
SF3A1-206ENST00000471037 FGBP02675 491 aa10.68□□□□□ -0.7
SF3A1-206ENST00000471037 ALAS1P13196 640 aa10.68□□□□□ -0.7
SF3A1-206ENST00000471037 IKQ13123 557 aaPredicted RBP10.68□□□□□ -0.7
SF3A1-206ENST00000471037 PWP2Q15269 919 aaKnown RBP10.68□□□□□ -0.7
SF3A1-206ENST00000471037 IQSEC1Q6DN90 963 aa10.68□□□□□ -0.7
SF3A1-206ENST00000471037 KCTD1Q719H9 257 aa10.68□□□□□ -0.7
SF3A1-206ENST00000471037 NOL8Q76FK4 1167 aaKnown RBP10.68□□□□□ -0.7
SF3A1-206ENST00000471037 FSD1Q9BTV5 496 aa10.68□□□□□ -0.7
SF3A1-206ENST00000471037 AP5M1Q9H0R1 490 aa10.68□□□□□ -0.7
SF3A1-206ENST00000471037 PRDM12Q9H4Q4 367 aa10.68□□□□□ -0.7
SF3A1-206ENST00000471037 VTA1Q9NP79 307 aa10.68□□□□□ -0.7
SF3A1-206ENST00000471037 IL17RBQ9NRM6 502 aa10.68□□□□□ -0.7
SF3A1-206ENST00000471037 MSRAQ9UJ68 235 aa10.68□□□□□ -0.7
SF3A1-206ENST00000471037 PRR12Q9ULL5 1215 aa10.68□□□□□ -0.7
SF3A1-206ENST00000471037 ISY1Q9ULR0 285 aaKnown RBP10.68□□□□□ -0.7
SF3A1-206ENST00000471037 LCTP09848 1927 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms