RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 SMC6Q96SB8 1091 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 EFCC1Q9HA90 598 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 GPCPD1Q9NPB8 672 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 HOMER3Q9NSC5 361 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 ZSWIM5Q9P217 1185 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 STIM2Q9P246 746 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 ARMCX3Q9UH62 379 aaPredicted RBP11.61□□□□□ -0.55
RRP1B-202ENST00000470886 GGA1Q9UJY5 639 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 N4BP1O75113 896 aaKnown RBP11.6□□□□□ -0.55
RRP1B-202ENST00000470886 ZBTB16Q05516 673 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 CASP8Q14790 479 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 PDIA6Q15084 440 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 INF2Q27J81 1249 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 KMT5BQ4FZB7 885 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 EMBQ6PCB8 327 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 FBXL16Q8N461 479 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 RUBCNQ92622 972 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 NEBLO76041 1014 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 SMTNP53814 917 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 EPHA10Q5JZY3 1008 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 SGMS1Q86VZ5 419 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 CCDC25Q86WR0 208 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 STRBPQ96SI9 672 aaKnown RBP11.6□□□□□ -0.55
RRP1B-202ENST00000470886 ISCA1Q9BUE6 129 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 NFAT5O94916 1531 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 CYP27B1O15528 508 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 H2AFZP0C0S5 128 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 RFX5P48382 616 aaPredicted RBP11.6□□□□□ -0.55
RRP1B-202ENST00000470886 FOXO4P98177 505 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 FAM47AQ5JRC9 791 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 FAM26FQ5R3K3 315 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 CEP85LQ5SZL2 805 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 ZNF365Q70YC5 407 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 H2AFVQ71UI9 128 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 PPFIBP2Q8ND30 876 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 CTTNBP2NLQ9P2B4 639 aa11.6□□□□□ -0.55
RRP1B-202ENST00000470886 SAP30BPQ9UHR5 308 aaKnown RBP11.6□□□□□ -0.55
RRP1B-202ENST00000470886 hCG_1642624A0A1W2PR95 340 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 SOWAHDA6NJG2 315 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 KLRF2D3W0D1 207 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 EEF2P13639 858 aaKnown RBP11.59□□□□□ -0.55
RRP1B-202ENST00000470886 GCFC2P16383 781 aaKnown RBP11.59□□□□□ -0.55
RRP1B-202ENST00000470886 SLC8A1P32418 973 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 BCAMP50895 628 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 CHRNDQ07001 517 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 ORC2Q13416 577 aaPredicted RBP11.59□□□□□ -0.55
RRP1B-202ENST00000470886 TCP11X2Q5H9J9 407 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 GKAP1Q5VSY0 366 aaPredicted RBP11.59□□□□□ -0.55
RRP1B-202ENST00000470886 FYB2Q5VWT5 728 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 CNBD1Q8NA66 436 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 SUDS3Q9H7L9 328 aaPredicted RBP11.59□□□□□ -0.55
RRP1B-202ENST00000470886 NLRC4Q9NPP4 1024 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.59□□□□□ -0.55
RRP1B-202ENST00000470886 FAM114A2Q9NRY5 505 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 FAN1Q9Y2M0 1017 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 ZNF609O15014 1411 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 SDR42E1Q8WUS8 393 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 TSNARE1Q96NA8 513 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 CCDC169A6NNP5 214 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 ARID5BQ14865 1188 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 WDR44Q5JSH3 913 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 WHAMMQ8TF30 809 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 ARHGEF35A5YM69 484 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 KRIT1O00522 736 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 GAS8O95995 478 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 NLRP10Q86W26 655 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 CMTR1Q8N1G2 835 aaKnown RBP11.59□□□□□ -0.55
RRP1B-202ENST00000470886 BRIP1Q9BX63 1249 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 AXIN2Q9Y2T1 843 aa11.59□□□□□ -0.55
RRP1B-202ENST00000470886 B4DLN1 442 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 KCNK3O14649 394 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 UFL1O94874 794 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 PBKQ96KB5 322 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 SYNCQ9H7C4 482 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 PANK4Q9NVE7 773 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 PCDHA12Q9UN75 941 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 PCDHB6Q9Y5E3 794 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 LMO7Q8WWI1 1683 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 SMIM23A6NLE4 172 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 RGS16O15492 202 aaPredicted RBP11.58□□□□□ -0.56
RRP1B-202ENST00000470886 TECP42680 631 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 CCZ1BP86790 482 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 CCZ1P86791 482 aaPredicted RBP11.58□□□□□ -0.56
RRP1B-202ENST00000470886 FKBP3Q00688 224 aaKnown RBP11.58□□□□□ -0.56
RRP1B-202ENST00000470886 LRRC63Q05C16 580 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 KRT31Q15323 416 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 TRAPPC3LQ5T215 181 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 LMNTD2Q8IXW0 634 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 MB21D1Q8N884 522 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 PCDHB13Q9Y5F0 798 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 RASSF2P50749 326 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 WDR78Q5VTH9 848 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 NCAPH2Q6IBW4 605 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 LARP4BQ92615 738 aaKnown RBP11.58□□□□□ -0.56
RRP1B-202ENST00000470886 MRPL44Q9H9J2 332 aaKnown RBP11.58□□□□□ -0.56
RRP1B-202ENST00000470886 ARHGEF10LQ9HCE6 1279 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 CAPN7Q9Y6W3 813 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 SOS2Q07890 1332 aaPredicted RBP11.58□□□□□ -0.56
RRP1B-202ENST00000470886 HSPA6P17066 643 aa11.58□□□□□ -0.56
RRP1B-202ENST00000470886 PLCB3Q01970 1234 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms