RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 HDAC8Q9BY41 377 aa4.21□□□□□ -1.74
UBXN4-206ENST00000470687 CNNM2Q9H8M5 875 aa4.21□□□□□ -1.74
UBXN4-206ENST00000470687 ZNF408Q9H9D4 720 aa4.21□□□□□ -1.74
UBXN4-206ENST00000470687 C9IYK1 514 aa4.2□□□□□ -1.74
UBXN4-206ENST00000470687 TNFRSF10CO14798 259 aa4.2□□□□□ -1.74
UBXN4-206ENST00000470687 BUB1BO60566 1050 aaPredicted RBP4.2□□□□□ -1.74
UBXN4-206ENST00000470687 CAPNS1P04632 268 aa4.2□□□□□ -1.74
UBXN4-206ENST00000470687 MPOP05164 745 aa4.2□□□□□ -1.74
UBXN4-206ENST00000470687 NME1P15531 152 aaKnown RBP4.2□□□□□ -1.74
UBXN4-206ENST00000470687 PLCG1P19174 1290 aa4.2□□□□□ -1.74
UBXN4-206ENST00000470687 ZC3H6P61129 1189 aaKnown RBP4.2□□□□□ -1.74
UBXN4-206ENST00000470687 MRM1Q6IN84 353 aaKnown RBP4.2□□□□□ -1.74
UBXN4-206ENST00000470687 ENOX1Q8TC92 643 aaKnown RBP4.2□□□□□ -1.74
UBXN4-206ENST00000470687 SYTL5Q8TDW5 730 aaPredicted RBP4.2□□□□□ -1.74
UBXN4-206ENST00000470687 KLHL6Q8WZ60 621 aa4.2□□□□□ -1.74
UBXN4-206ENST00000470687 FOXP3Q9BZS1 431 aa4.2□□□□□ -1.74
UBXN4-206ENST00000470687 SUSD2Q9UGT4 822 aa4.2□□□□□ -1.74
UBXN4-206ENST00000470687 MRVI1Q9Y6F6 885 aa4.2□□□□□ -1.74
UBXN4-206ENST00000470687 CCDC88BA6NC98 1476 aa4.19□□□□□ -1.74
UBXN4-206ENST00000470687 PRDM2Q13029 1718 aa4.19□□□□□ -1.74
UBXN4-206ENST00000470687 A0A1W2PQH9 124 aa4.19□□□□□ -1.74
UBXN4-206ENST00000470687 MATN3O15232 486 aa4.19□□□□□ -1.74
UBXN4-206ENST00000470687 MAGEA10P43363 369 aaPredicted RBP4.19□□□□□ -1.74
UBXN4-206ENST00000470687 NCKAP1LP55160 1127 aa4.19□□□□□ -1.74
UBXN4-206ENST00000470687 RTP1P59025 263 aa4.19□□□□□ -1.74
UBXN4-206ENST00000470687 CYP4F3Q08477 520 aa4.19□□□□□ -1.74
UBXN4-206ENST00000470687 RBL2Q08999 1139 aa4.19□□□□□ -1.74
UBXN4-206ENST00000470687 TMEM62Q0P6H9 643 aa4.19□□□□□ -1.74
UBXN4-206ENST00000470687 NMIQ13287 307 aaPredicted RBP4.19□□□□□ -1.74
UBXN4-206ENST00000470687 SERINC3Q13530 473 aa4.19□□□□□ -1.74
UBXN4-206ENST00000470687 KIR3DS1Q14943 382 aa4.19□□□□□ -1.74
UBXN4-206ENST00000470687 UBXN11Q5T124 520 aa4.19□□□□□ -1.74
UBXN4-206ENST00000470687 TCFL5Q9UL49 500 aa4.19□□□□□ -1.74
UBXN4-206ENST00000470687 INPP5FQ9Y2H2 1132 aa4.19□□□□□ -1.74
UBXN4-206ENST00000470687 URB2Q14146 1524 aaKnown RBP4.18□□□□□ -1.74
UBXN4-206ENST00000470687 B2RBV5 119 aa4.18□□□□□ -1.74
UBXN4-206ENST00000470687 OVOL3O00110 214 aa4.18□□□□□ -1.74
UBXN4-206ENST00000470687 IGFBP6P24592 240 aaPredicted RBP4.18□□□□□ -1.74
UBXN4-206ENST00000470687 ADAM17P78536 824 aa4.18□□□□□ -1.74
UBXN4-206ENST00000470687 SNW1Q13573 536 aaKnown RBP4.18□□□□□ -1.74
UBXN4-206ENST00000470687 RAB3GAP1Q15042 981 aa4.18□□□□□ -1.74
UBXN4-206ENST00000470687 BBS9Q3SYG4 887 aa4.18□□□□□ -1.74
UBXN4-206ENST00000470687 ARSHQ5FYA8 562 aa4.18□□□□□ -1.74
UBXN4-206ENST00000470687 ZPBP2Q6X784 338 aa4.18□□□□□ -1.74
UBXN4-206ENST00000470687 DAGLBQ8NCG7 672 aa4.18□□□□□ -1.74
UBXN4-206ENST00000470687 TCTN2Q96GX1 697 aa4.18□□□□□ -1.74
UBXN4-206ENST00000470687 SEC16BQ96JE7 1060 aa4.18□□□□□ -1.74
UBXN4-206ENST00000470687 KIF2CQ99661 725 aa4.18□□□□□ -1.74
UBXN4-206ENST00000470687 ASCC2Q9H1I8 757 aaPredicted RBP4.18□□□□□ -1.74
UBXN4-206ENST00000470687 CCSER2Q9H7U1 834 aa4.18□□□□□ -1.74
UBXN4-206ENST00000470687 SRRDQ9UH36 339 aa4.18□□□□□ -1.74
UBXN4-206ENST00000470687 MINPP1Q9UNW1 487 aa4.18□□□□□ -1.74
UBXN4-206ENST00000470687 WDR97A6NE52 1622 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 TOPBP1Q92547 1522 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 FADS2P1A8MWK0 482 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 NUDT19A8MXV4 375 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 FKTNO75072 461 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 DNAJA1P31689 397 aaKnown RBP4.17□□□□□ -1.74
UBXN4-206ENST00000470687 ARL4AP40617 200 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 LIMS1P48059 325 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 PCBP3P57721 371 aaKnown RBP4.17□□□□□ -1.74
UBXN4-206ENST00000470687 CBX2Q14781 532 aaPredicted RBP4.17□□□□□ -1.74
UBXN4-206ENST00000470687 CWF19L2Q2TBE0 894 aaKnown RBP4.17□□□□□ -1.74
UBXN4-206ENST00000470687 HSF5Q4G112 596 aaPredicted RBP4.17□□□□□ -1.74
UBXN4-206ENST00000470687 VWA3BQ502W6 1294 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 GALNT18Q6P9A2 607 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 UNC5AQ6ZN44 842 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 FERMT3Q86UX7 667 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 ZNF655Q8N720 491 aaPredicted RBP4.17□□□□□ -1.74
UBXN4-206ENST00000470687 SLC16A11Q8NCK7 471 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 LINC00116Q8NCU8 138 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 CCDC74BQ96LY2 380 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 LGR4Q9BXB1 951 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 TNFRSF12AQ9NP84 129 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 PCDHB10Q9UN67 800 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 TAF6LQ9Y6J9 622 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 IRS2Q9Y4H2 1338 aa4.17□□□□□ -1.74
UBXN4-206ENST00000470687 ARNTLO00327 626 aa4.16□□□□□ -1.74
UBXN4-206ENST00000470687 RGS13O14921 159 aa4.16□□□□□ -1.74
UBXN4-206ENST00000470687 SMAD7O15105 426 aaKnown RBP4.16□□□□□ -1.74
UBXN4-206ENST00000470687 CBFA2T2O43439 604 aa4.16□□□□□ -1.74
UBXN4-206ENST00000470687 LAPTM5Q13571 262 aa4.16□□□□□ -1.74
UBXN4-206ENST00000470687 NT5DC1Q5TFE4 455 aa4.16□□□□□ -1.74
UBXN4-206ENST00000470687 RPTNQ6XPR3 784 aa4.16□□□□□ -1.74
UBXN4-206ENST00000470687 LIPIQ6XZB0 460 aa4.16□□□□□ -1.74
UBXN4-206ENST00000470687 NLGN1Q8N2Q7 840 aa4.16□□□□□ -1.74
UBXN4-206ENST00000470687 HNRNPLLQ8WVV9 542 aaKnown RBP4.16□□□□□ -1.74
UBXN4-206ENST00000470687 FCRL2Q96LA5 508 aaPredicted RBP4.16□□□□□ -1.74
UBXN4-206ENST00000470687 SPATA25Q9BR10 227 aa4.16□□□□□ -1.74
UBXN4-206ENST00000470687 SRRTQ9BXP5 876 aaKnown RBP4.16□□□□□ -1.74
UBXN4-206ENST00000470687 PIF1Q9H611 641 aa4.16□□□□□ -1.74
UBXN4-206ENST00000470687 USP40Q9NVE5 1235 aa4.16□□□□□ -1.74
UBXN4-206ENST00000470687 SMPD4Q9NXE4 827 aa4.16□□□□□ -1.74
UBXN4-206ENST00000470687 TNFRSF10DQ9UBN6 386 aa4.16□□□□□ -1.74
UBXN4-206ENST00000470687 KLHL3Q9UH77 587 aa4.16□□□□□ -1.74
UBXN4-206ENST00000470687 GPR55Q9Y2T6 319 aaPredicted RBP4.16□□□□□ -1.74
UBXN4-206ENST00000470687 DNMBPQ6XZF7 1577 aa4.15□□□□□ -1.74
UBXN4-206ENST00000470687 SOGA1O94964 1423 aa4.15□□□□□ -1.74
UBXN4-206ENST00000470687 A0A1B0GTL3 188 aa4.15□□□□□ -1.75
UBXN4-206ENST00000470687 SSU72P8A0A1W2PR75 194 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms