RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 SIRPGQ9P1W8 387 aa8.5□□□□□ -1.05
SSB-209ENST00000470621 GPR160Q9UJ42 338 aa8.5□□□□□ -1.05
SSB-209ENST00000470621 A0A1W2PQU0 124 aa8.49□□□□□ -1.05
SSB-209ENST00000470621 FAM221BA6H8Z2 402 aa8.49□□□□□ -1.05
SSB-209ENST00000470621 PDPK1O15530 556 aa8.49□□□□□ -1.05
SSB-209ENST00000470621 ENDOUP21128 410 aaKnown RBP8.49□□□□□ -1.05
SSB-209ENST00000470621 PPP2R2AP63151 447 aa8.49□□□□□ -1.05
SSB-209ENST00000470621 CHRNEQ04844 493 aa8.49□□□□□ -1.05
SSB-209ENST00000470621 KCNMB1Q16558 191 aa8.49□□□□□ -1.05
SSB-209ENST00000470621 CRACR2BQ8N4Y2 399 aaPredicted RBP8.49□□□□□ -1.05
SSB-209ENST00000470621 SHISA4Q96DD7 197 aa8.49□□□□□ -1.05
SSB-209ENST00000470621 EPN3Q9H201 632 aa8.49□□□□□ -1.05
SSB-209ENST00000470621 GPRC5CQ9NQ84 441 aa8.49□□□□□ -1.05
SSB-209ENST00000470621 TNFRSF10DQ9UBN6 386 aa8.49□□□□□ -1.05
SSB-209ENST00000470621 NRDCO43847 1150 aa8.48□□□□□ -1.05
SSB-209ENST00000470621 CAPNS1P04632 268 aa8.48□□□□□ -1.05
SSB-209ENST00000470621 THBDP07204 575 aa8.48□□□□□ -1.05
SSB-209ENST00000470621 PRSS53Q2L4Q9 553 aa8.48□□□□□ -1.05
SSB-209ENST00000470621 SPPL2CQ8IUH8 684 aa8.48□□□□□ -1.05
SSB-209ENST00000470621 SIRT2Q8IXJ6 389 aa8.48□□□□□ -1.05
SSB-209ENST00000470621 ST13P5Q8NFI4 369 aaPredicted RBP8.48□□□□□ -1.05
SSB-209ENST00000470621 COPS5Q92905 334 aa8.48□□□□□ -1.05
SSB-209ENST00000470621 LIN37Q96GY3 246 aaPredicted RBP8.48□□□□□ -1.05
SSB-209ENST00000470621 KRTAP4-9Q9BYQ8 210 aa8.48□□□□□ -1.05
SSB-209ENST00000470621 SNTG2Q9NY99 539 aa8.48□□□□□ -1.05
SSB-209ENST00000470621 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.48□□□□□ -1.05
SSB-209ENST00000470621 GLI1P08151 1106 aa8.47□□□□□ -1.05
SSB-209ENST00000470621 SEPHS1P49903 392 aa8.47□□□□□ -1.05
SSB-209ENST00000470621 RASGRF1Q13972 1273 aa8.47□□□□□ -1.05
SSB-209ENST00000470621 CYP2R1Q6VVX0 501 aa8.47□□□□□ -1.05
SSB-209ENST00000470621 NLRX1Q86UT6 975 aa8.47□□□□□ -1.05
SSB-209ENST00000470621 LILRA2Q8N149 483 aa8.47□□□□□ -1.05
SSB-209ENST00000470621 UBXN4Q92575 508 aa8.47□□□□□ -1.05
SSB-209ENST00000470621 DEPDC7Q96QD5 511 aa8.47□□□□□ -1.05
SSB-209ENST00000470621 CCDC113Q9H0I3 377 aa8.47□□□□□ -1.05
SSB-209ENST00000470621 CLEC1BQ9P126 229 aa8.47□□□□□ -1.05
SSB-209ENST00000470621 PFDN2Q9UHV9 154 aa8.47□□□□□ -1.05
SSB-209ENST00000470621 DIAPH1O60610 1272 aaKnown RBP8.46□□□□□ -1.06
SSB-209ENST00000470621 ECI1P42126 302 aa8.46□□□□□ -1.06
SSB-209ENST00000470621 LAPTM5Q13571 262 aa8.46□□□□□ -1.06
SSB-209ENST00000470621 SLC14A2Q15849 920 aa8.46□□□□□ -1.06
SSB-209ENST00000470621 TMEM67Q5HYA8 995 aa8.46□□□□□ -1.06
SSB-209ENST00000470621 EEF1DP3Q658K8 133 aa8.46□□□□□ -1.06
SSB-209ENST00000470621 MBLAC2Q68D91 279 aa8.46□□□□□ -1.06
SSB-209ENST00000470621 CPNE8Q86YQ8 564 aa8.46□□□□□ -1.06
SSB-209ENST00000470621 KSR1Q8IVT5 923 aa8.46□□□□□ -1.06
SSB-209ENST00000470621 CYP26B1Q9NR63 512 aa8.46□□□□□ -1.06
SSB-209ENST00000470621 ARHGEF4Q9NR80 690 aa8.46□□□□□ -1.06
SSB-209ENST00000470621 IMPACTQ9P2X3 320 aa8.46□□□□□ -1.06
SSB-209ENST00000470621 SNRPB2P08579 225 aaKnown RBP8.45□□□□□ -1.06
SSB-209ENST00000470621 MSL3P1P0C860 447 aa8.45□□□□□ -1.06
SSB-209ENST00000470621 PLS3P13797 630 aa8.45□□□□□ -1.06
SSB-209ENST00000470621 GFRA1P56159 465 aa8.45□□□□□ -1.06
SSB-209ENST00000470621 MTERF2Q49AM1 385 aa8.45□□□□□ -1.06
SSB-209ENST00000470621 FRS2Q8WU20 508 aa8.45□□□□□ -1.06
SSB-209ENST00000470621 OSBPL2Q9H1P3 480 aa8.45□□□□□ -1.06
SSB-209ENST00000470621 TAF6LQ9Y6J9 622 aa8.45□□□□□ -1.06
SSB-209ENST00000470621 A0A1W2PQ45 241 aaPredicted RBP8.44□□□□□ -1.06
SSB-209ENST00000470621 A0A1W2PQY0 241 aa8.44□□□□□ -1.06
SSB-209ENST00000470621 AGRPO00253 132 aa8.44□□□□□ -1.06
SSB-209ENST00000470621 YOD1Q5VVQ6 348 aaPredicted RBP8.44□□□□□ -1.06
SSB-209ENST00000470621 HLA-DQA1Q5Y7H0 255 aa8.44□□□□□ -1.06
SSB-209ENST00000470621 KREMEN2Q8NCW0 462 aa8.44□□□□□ -1.06
SSB-209ENST00000470621 NPLOC4Q8TAT6 608 aa8.44□□□□□ -1.06
SSB-209ENST00000470621 SRPK1Q96SB4 655 aaKnown RBP8.44□□□□□ -1.06
SSB-209ENST00000470621 LNPKQ9C0E8 428 aa8.44□□□□□ -1.06
SSB-209ENST00000470621 TMEFF2Q9UIK5 374 aaPredicted RBP8.44□□□□□ -1.06
SSB-209ENST00000470621 WTIPA6NIX2 430 aaPredicted RBP8.43□□□□□ -1.06
SSB-209ENST00000470621 ARNTLO00327 626 aa8.43□□□□□ -1.06
SSB-209ENST00000470621 TBC1D8O95759 1140 aa8.43□□□□□ -1.06
SSB-209ENST00000470621 PRKCAP17252 672 aa8.43□□□□□ -1.06
SSB-209ENST00000470621 SDHBP21912 280 aa8.43□□□□□ -1.06
SSB-209ENST00000470621 DENND5AQ6IQ26 1287 aa8.43□□□□□ -1.06
SSB-209ENST00000470621 GALNT18Q6P9A2 607 aa8.43□□□□□ -1.06
SSB-209ENST00000470621 CCDC103Q8IW40 242 aa8.43□□□□□ -1.06
SSB-209ENST00000470621 TMEM145Q8NBT3 493 aa8.43□□□□□ -1.06
SSB-209ENST00000470621 NUP43Q8NFH3 380 aa8.43□□□□□ -1.06
SSB-209ENST00000470621 C1orf159Q96HA4 380 aa8.43□□□□□ -1.06
SSB-209ENST00000470621 IER2Q9BTL4 223 aa8.43□□□□□ -1.06
SSB-209ENST00000470621 KCNK12Q9HB15 430 aa8.43□□□□□ -1.06
SSB-209ENST00000470621 YBX2Q9Y2T7 364 aaKnown RBP8.43□□□□□ -1.06
SSB-209ENST00000470621 NPHP3-ACAD11A0A0J9YXS1 232 aa8.42□□□□□ -1.06
SSB-209ENST00000470621 ADCY3O60266 1144 aa8.42□□□□□ -1.06
SSB-209ENST00000470621 PAMP19021 973 aa8.42□□□□□ -1.06
SSB-209ENST00000470621 HOXC12P31275 282 aa8.42□□□□□ -1.06
SSB-209ENST00000470621 KCNJ6P48051 423 aa8.42□□□□□ -1.06
SSB-209ENST00000470621 MVKQ03426 396 aa8.42□□□□□ -1.06
SSB-209ENST00000470621 BMS1Q14692 1282 aaKnown RBP8.42□□□□□ -1.06
SSB-209ENST00000470621 INF2Q27J81 1249 aa8.42□□□□□ -1.06
SSB-209ENST00000470621 SOGA3Q5TF21 947 aa8.42□□□□□ -1.06
SSB-209ENST00000470621 MPZL3Q6UWV2 235 aa8.42□□□□□ -1.06
SSB-209ENST00000470621 PRR23BQ6ZRT6 265 aa8.42□□□□□ -1.06
SSB-209ENST00000470621 JAMLQ86YT9 394 aa8.42□□□□□ -1.06
SSB-209ENST00000470621 SGSM3Q96HU1 749 aa8.42□□□□□ -1.06
SSB-209ENST00000470621 INTS4Q96HW7 963 aaKnown RBP8.42□□□□□ -1.06
SSB-209ENST00000470621 AARSD1Q9BTE6 412 aaKnown RBP8.42□□□□□ -1.06
SSB-209ENST00000470621 SPATA9Q9BWV2 254 aa8.42□□□□□ -1.06
SSB-209ENST00000470621 CWC22Q9HCG8 908 aaKnown RBP8.42□□□□□ -1.06
SSB-209ENST00000470621 FBLN5Q9UBX5 448 aa8.42□□□□□ -1.06
SSB-209ENST00000470621 ACSL6Q9UKU0 697 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms