RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 FTSJ3Q8IY81 847 aaKnown RBP10.64□□□□□ -0.71
XRN1-208ENST00000470537 SPICE1Q8N0Z3 855 aa10.64□□□□□ -0.71
XRN1-208ENST00000470537 EAF2Q96CJ1 260 aaPredicted RBP10.64□□□□□ -0.71
XRN1-208ENST00000470537 ATG4CQ96DT6 458 aa10.64□□□□□ -0.71
XRN1-208ENST00000470537 SEZ6LQ9BYH1 1024 aa10.64□□□□□ -0.71
XRN1-208ENST00000470537 CTDP1Q9Y5B0 961 aaPredicted RBP10.64□□□□□ -0.71
XRN1-208ENST00000470537 SPTBN5Q9NRC6 3674 aaKnown RBP10.64□□□□□ -0.71
XRN1-208ENST00000470537 SMCHD1A6NHR9 2005 aa10.63□□□□□ -0.71
XRN1-208ENST00000470537 SYNGAP1Q96PV0 1343 aa10.63□□□□□ -0.71
XRN1-208ENST00000470537 VWA5AO00534 786 aa10.63□□□□□ -0.71
XRN1-208ENST00000470537 ITGB8P26012 769 aa10.63□□□□□ -0.71
XRN1-208ENST00000470537 KCNA10Q16322 511 aa10.63□□□□□ -0.71
XRN1-208ENST00000470537 ZNF792Q3KQV3 632 aa10.63□□□□□ -0.71
XRN1-208ENST00000470537 AACSQ86V21 672 aa10.63□□□□□ -0.71
XRN1-208ENST00000470537 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.63□□□□□ -0.712e-11■■■■□ 20.2
XRN1-208ENST00000470537 SLC28A3Q9HAS3 691 aa10.63□□□□□ -0.71
XRN1-208ENST00000470537 DCP1AQ9NPI6 582 aaPredicted RBP10.63□□□□□ -0.71
XRN1-208ENST00000470537 MUC3AQ02505 3323 aa10.63□□□□□ -0.71
XRN1-208ENST00000470537 ZNFX1Q9P2E3 1918 aaKnown RBP10.62□□□□□ -0.71
XRN1-208ENST00000470537 APBB1O00213 710 aa10.62□□□□□ -0.71
XRN1-208ENST00000470537 ADAMTS4O75173 837 aa10.62□□□□□ -0.71
XRN1-208ENST00000470537 PGK2P07205 417 aa10.62□□□□□ -0.71
XRN1-208ENST00000470537 ZNF865P0CJ78 1059 aaPredicted RBP10.62□□□□□ -0.71
XRN1-208ENST00000470537 PDE6AP16499 860 aa10.62□□□□□ -0.71
XRN1-208ENST00000470537 CST5P28325 142 aaPredicted RBP10.62□□□□□ -0.71
XRN1-208ENST00000470537 EPHB4P54760 987 aa10.62□□□□□ -0.71
XRN1-208ENST00000470537 MAMDC4Q6UXC1 1216 aa10.62□□□□□ -0.71
XRN1-208ENST00000470537 SCUBE3Q8IX30 993 aa10.62□□□□□ -0.71
XRN1-208ENST00000470537 CLASRPQ8N2M8 674 aaKnown RBP10.62□□□□□ -0.71
XRN1-208ENST00000470537 TMEM57Q8N5G2 664 aa10.62□□□□□ -0.71
XRN1-208ENST00000470537 PRPF38AQ8NAV1 312 aaKnown RBP10.62□□□□□ -0.71
XRN1-208ENST00000470537 PPM1EQ8WY54 764 aa10.62□□□□□ -0.71
XRN1-208ENST00000470537 FAM122AQ96E09 287 aa10.62□□□□□ -0.71
XRN1-208ENST00000470537 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.62□□□□□ -0.71
XRN1-208ENST00000470537 C1QTNF1Q9BXJ1 281 aa10.62□□□□□ -0.71
XRN1-208ENST00000470537 TEX13BQ9BXU2 312 aa10.62□□□□□ -0.71
XRN1-208ENST00000470537 ABHD16BQ9H3Z7 469 aa10.62□□□□□ -0.71
XRN1-208ENST00000470537 ANTXR1Q9H6X2 564 aa10.62□□□□□ -0.71
XRN1-208ENST00000470537 PPP1R9AQ9ULJ8 1098 aa10.62□□□□□ -0.71
XRN1-208ENST00000470537 A0A0U1RQG5 324 aaPredicted RBP10.61□□□□□ -0.71
XRN1-208ENST00000470537 ARVCFO00192 962 aa10.61□□□□□ -0.71
XRN1-208ENST00000470537 RAD21O60216 631 aa10.61□□□□□ -0.71
XRN1-208ENST00000470537 C6orf222P0C671 652 aaPredicted RBP10.61□□□□□ -0.71
XRN1-208ENST00000470537 IGFBP4P22692 258 aa10.61□□□□□ -0.71
XRN1-208ENST00000470537 PUS10Q3MIT2 529 aaKnown RBP10.61□□□□□ -0.71
XRN1-208ENST00000470537 GNASQ5JWF2 1037 aa10.61□□□□□ -0.71
XRN1-208ENST00000470537 RPUSD2Q8IZ73 545 aaKnown RBP10.61□□□□□ -0.71
XRN1-208ENST00000470537 KLHDC9Q8NEP7 349 aa10.61□□□□□ -0.71
XRN1-208ENST00000470537 ADAMTS19Q8TE59 1207 aa10.61□□□□□ -0.71
XRN1-208ENST00000470537 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.61□□□□□ -0.71
XRN1-208ENST00000470537 SDR42E1Q8WUS8 393 aa10.61□□□□□ -0.71
XRN1-208ENST00000470537 UHRF1Q96T88 793 aaPredicted RBP10.61□□□□□ -0.71
XRN1-208ENST00000470537 PBX4Q9BYU1 374 aa10.61□□□□□ -0.71
XRN1-208ENST00000470537 TLR7Q9NYK1 1049 aaKnown RBP10.61□□□□□ -0.71
XRN1-208ENST00000470537 FBXO40Q9UH90 709 aa10.61□□□□□ -0.71
XRN1-208ENST00000470537 TBX21Q9UL17 535 aa10.61□□□□□ -0.71
XRN1-208ENST00000470537 MYO5AQ9Y4I1 1855 aaKnown RBP10.61□□□□□ -0.71
XRN1-208ENST00000470537 MYO9BQ13459 2157 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 ZNF532Q9HCE3 1301 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 SYNRGQ9UMZ2 1314 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 ZEB2O60315 1214 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 GDF9O60383 454 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 ZBED4O75132 1171 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 CABYRO75952 493 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 FGBP02675 491 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 IFIT2P09913 472 aaKnown RBP10.6□□□□□ -0.71
XRN1-208ENST00000470537 EEF2P13639 858 aaKnown RBP10.6□□□□□ -0.71
XRN1-208ENST00000470537 CDK8P49336 464 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 CDK7P50613 346 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 ACVR2BQ13705 512 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 PLA2G2CQ5R387 149 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 TMEM240Q5SV17 173 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 SIAH1Q8IUQ4 282 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 USP38Q8NB14 1042 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 PRDM12Q9H4Q4 367 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 ZNF287Q9HBT7 754 aa10.6□□□□□ -0.71
XRN1-208ENST00000470537 ZHX1Q9UKY1 873 aaPredicted RBP10.6□□□□□ -0.71
XRN1-208ENST00000470537 ZNF214Q9UL59 606 aaPredicted RBP10.6□□□□□ -0.71
XRN1-208ENST00000470537 GOLIM4O00461 696 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 ATP2A1O14983 1001 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 ASGR1P07306 291 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 FDX1P10109 184 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 AKR1B1P15121 316 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 CSF2RAP15509 400 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 TAL1P17542 331 aaPredicted RBP10.59□□□□□ -0.71
XRN1-208ENST00000470537 PLA2G5P39877 138 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 GJA9P57773 515 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 KIAA1755Q5JYT7 1200 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 C12orf60Q5U649 245 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 RASIP1Q5U651 963 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 SNRNP48Q6IEG0 339 aaKnown RBP10.59□□□□□ -0.71
XRN1-208ENST00000470537 CCSAPQ6IQ19 270 aaPredicted RBP10.59□□□□□ -0.71
XRN1-208ENST00000470537 ZSCAN25Q6NSZ9 544 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 C16orf86Q6ZW13 317 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 ZNF365Q70YC5 407 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 METTL3Q86U44 580 aaKnown RBP10.59□□□□□ -0.71
XRN1-208ENST00000470537 ITPRIPQ8IWB1 547 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 ANKRD35Q8N283 1001 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 HERVK_113Q902F9 699 aa10.59□□□□□ -0.71
XRN1-208ENST00000470537 SPSB2Q99619 263 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms