RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 SLC16A2P36021 539 aa12.66□□□□□ -0.38
RFTN1-208ENST00000470458 SEC23AQ15436 765 aa12.66□□□□□ -0.38
RFTN1-208ENST00000470458 NFXL1Q6ZNB6 911 aa12.66□□□□□ -0.38
RFTN1-208ENST00000470458 RNF207Q6ZRF8 634 aa12.66□□□□□ -0.38
RFTN1-208ENST00000470458 FAM133AQ8N9E0 248 aa12.66□□□□□ -0.38
RFTN1-208ENST00000470458 PCSK9Q8NBP7 692 aaKnown RBP12.66□□□□□ -0.38
RFTN1-208ENST00000470458 PAWRQ96IZ0 340 aaKnown RBP12.66□□□□□ -0.38
RFTN1-208ENST00000470458 TSEN34Q9BSV6 310 aaKnown RBP12.66□□□□□ -0.38
RFTN1-208ENST00000470458 AMNQ9BXJ7 453 aa12.66□□□□□ -0.38
RFTN1-208ENST00000470458 Q9Y3F1 56 aa12.66□□□□□ -0.38
RFTN1-208ENST00000470458 SMCHD1A6NHR9 2005 aa12.66□□□□□ -0.38
RFTN1-208ENST00000470458 PALM3A6NDB9 673 aaPredicted RBP12.65□□□□□ -0.38
RFTN1-208ENST00000470458 DUSP11O75319 330 aaKnown RBP12.65□□□□□ -0.38
RFTN1-208ENST00000470458 PSMA5P28066 241 aa12.65□□□□□ -0.38
RFTN1-208ENST00000470458 TRIM32Q13049 653 aa12.65□□□□□ -0.38
RFTN1-208ENST00000470458 ACVR2BQ13705 512 aa12.65□□□□□ -0.38
RFTN1-208ENST00000470458 BRDTQ58F21 947 aaPredicted RBP12.65□□□□□ -0.38
RFTN1-208ENST00000470458 CREB3L3Q68CJ9 461 aa12.65□□□□□ -0.38
RFTN1-208ENST00000470458 IQSEC1Q6DN90 963 aa12.65□□□□□ -0.38
RFTN1-208ENST00000470458 TTBK2Q6IQ55 1244 aa12.65□□□□□ -0.38
RFTN1-208ENST00000470458 FBXO11Q86XK2 927 aa12.65□□□□□ -0.38
RFTN1-208ENST00000470458 ADGRF4Q8IZF3 695 aa12.65□□□□□ -0.38
RFTN1-208ENST00000470458 NUP133Q8WUM0 1156 aa12.65□□□□□ -0.38
RFTN1-208ENST00000470458 VTA1Q9NP79 307 aa12.65□□□□□ -0.38
RFTN1-208ENST00000470458 A1CFQ9NQ94 594 aaKnown RBP12.65□□□□□ -0.38
RFTN1-208ENST00000470458 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.65□□□□□ -0.38
RFTN1-208ENST00000470458 CYP39A1Q9NYL5 469 aa12.65□□□□□ -0.38
RFTN1-208ENST00000470458 PTPDC1A2A3K4 754 aa12.64□□□□□ -0.39
RFTN1-208ENST00000470458 MOXD2PA6NHM9 499 aa12.64□□□□□ -0.39
RFTN1-208ENST00000470458 SLC27A2O14975 620 aa12.64□□□□□ -0.39
RFTN1-208ENST00000470458 FGD1P98174 961 aa12.64□□□□□ -0.39
RFTN1-208ENST00000470458 GRM4Q14833 912 aa12.64□□□□□ -0.39
RFTN1-208ENST00000470458 CDC37Q16543 378 aaPredicted RBP12.64□□□□□ -0.39
RFTN1-208ENST00000470458 NSMFQ6X4W1 530 aa12.64□□□□□ -0.39
RFTN1-208ENST00000470458 ARMCX2Q7L311 632 aa12.64□□□□□ -0.39
RFTN1-208ENST00000470458 MB21D2Q8IYB1 491 aaPredicted RBP12.64□□□□□ -0.39
RFTN1-208ENST00000470458 IGDCC4Q8TDY8 1250 aa12.64□□□□□ -0.39
RFTN1-208ENST00000470458 NEK1Q96PY6 1258 aa12.64□□□□□ -0.39
RFTN1-208ENST00000470458 IWS1Q96ST2 819 aa12.64□□□□□ -0.39
RFTN1-208ENST00000470458 IL25Q9H293 177 aa12.64□□□□□ -0.39
RFTN1-208ENST00000470458 XPNPEP3Q9NQH7 507 aa12.64□□□□□ -0.39
RFTN1-208ENST00000470458 PRKAG2Q9UGJ0 569 aa12.64□□□□□ -0.39
RFTN1-208ENST00000470458 SLC12A7Q9Y666 1083 aa12.64□□□□□ -0.39
RFTN1-208ENST00000470458 CCDC196A0A1B0GTZ2 297 aa12.63□□□□□ -0.39
RFTN1-208ENST00000470458 ZBTB5O15062 677 aa12.63□□□□□ -0.39
RFTN1-208ENST00000470458 NKRFO15226 690 aaKnown RBP eCLIP12.63□□□□□ -0.39
RFTN1-208ENST00000470458 PRC1O43663 620 aa12.63□□□□□ -0.39
RFTN1-208ENST00000470458 ZNF865P0CJ78 1059 aaPredicted RBP12.63□□□□□ -0.39
RFTN1-208ENST00000470458 GOLGA8HP0CJ92 632 aa12.63□□□□□ -0.39
RFTN1-208ENST00000470458 RCAN1P53805 252 aa12.63□□□□□ -0.39
RFTN1-208ENST00000470458 CYB5R4Q7L1T6 521 aa12.63□□□□□ -0.39
RFTN1-208ENST00000470458 DHX32Q7L7V1 743 aaKnown RBP12.63□□□□□ -0.39
RFTN1-208ENST00000470458 NSUN6Q8TEA1 469 aaKnown RBP12.63□□□□□ -0.39
RFTN1-208ENST00000470458 AP5M1Q9H0R1 490 aa12.63□□□□□ -0.39
RFTN1-208ENST00000470458 SEC63Q9UGP8 760 aaKnown RBP12.63□□□□□ -0.39
RFTN1-208ENST00000470458 HTTP42858 3142 aa12.63□□□□□ -0.39
RFTN1-208ENST00000470458 PNMA6FA0A0J9YX94 578 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 CABYRO75952 493 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 COL6A1P12109 1028 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 PDE4DQ08499 809 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 TROAPQ12815 778 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 BAATQ14032 418 aaPredicted RBP12.62□□□□□ -0.39
RFTN1-208ENST00000470458 C1orf53Q5VUE5 145 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 SGMS1Q86VZ5 419 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 CCDC144CPQ8IYA2 1237 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 ZNF654Q8IZM8 581 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 MORC4Q8TE76 937 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 CHMP4CQ96CF2 233 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 RRP36Q96EU6 259 aaKnown RBP12.62□□□□□ -0.39
RFTN1-208ENST00000470458 UBA5Q9GZZ9 404 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 RIOX1Q9H6W3 641 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 JMJD4Q9H9V9 463 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 VAT1LQ9HCJ6 419 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 RBM28Q9NW13 759 aaKnown RBP12.62□□□□□ -0.39
RFTN1-208ENST00000470458 ZHX1Q9UKY1 873 aaPredicted RBP12.62□□□□□ -0.39
RFTN1-208ENST00000470458 CENPFP49454 3210 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 FRMPD3Q5JV73 1810 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 MROH7Q68CQ1 1323 aa12.62□□□□□ -0.39
RFTN1-208ENST00000470458 A0A1W2PPC1 479 aa12.61□□□□□ -0.39
RFTN1-208ENST00000470458 KPNA6O60684 536 aa12.61□□□□□ -0.39
RFTN1-208ENST00000470458 SNAI1O95863 264 aaPredicted RBP12.61□□□□□ -0.39
RFTN1-208ENST00000470458 CALML3P27482 149 aa12.61□□□□□ -0.39
RFTN1-208ENST00000470458 CST5P28325 142 aaPredicted RBP12.61□□□□□ -0.39
RFTN1-208ENST00000470458 TNFAIP2Q03169 654 aa12.61□□□□□ -0.39
RFTN1-208ENST00000470458 CCDC144BQ3MJ40 725 aa12.61□□□□□ -0.39
RFTN1-208ENST00000470458 KCNV1Q6PIU1 500 aa12.61□□□□□ -0.39
RFTN1-208ENST00000470458 NOL8Q76FK4 1167 aaKnown RBP12.61□□□□□ -0.39
RFTN1-208ENST00000470458 TRPV1Q8NER1 839 aa12.61□□□□□ -0.39
RFTN1-208ENST00000470458 MTMR8Q96EF0 704 aa12.61□□□□□ -0.39
RFTN1-208ENST00000470458 SPZ1Q9BXG8 430 aa12.61□□□□□ -0.39
RFTN1-208ENST00000470458 SENP6Q9GZR1 1112 aaPredicted RBP12.61□□□□□ -0.39
RFTN1-208ENST00000470458 GLT8D2Q9H1C3 349 aa12.61□□□□□ -0.39
RFTN1-208ENST00000470458 RBM27Q9P2N5 1060 aaKnown RBP12.61□□□□□ -0.39
RFTN1-208ENST00000470458 MAD2L2Q9UI95 211 aa12.61□□□□□ -0.39
RFTN1-208ENST00000470458 PCDHA1Q9Y5I3 950 aa12.61□□□□□ -0.39
RFTN1-208ENST00000470458 MCM3APO60318 1980 aa12.61□□□□□ -0.39
RFTN1-208ENST00000470458 ALDH5A1P51649 535 aaPredicted RBP12.6□□□□□ -0.39
RFTN1-208ENST00000470458 RPS6P62753 249 aaKnown RBP12.6□□□□□ -0.39
RFTN1-208ENST00000470458 NKX3-2P78367 333 aa12.6□□□□□ -0.39
RFTN1-208ENST00000470458 LRRC41Q15345 812 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms